CX294110
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_BARQU (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bartonella quintana GN=clpX PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.023e-13 Identity = 37/59 (62.71%), Postives = 46/59 (77.97%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 L KQY+RLF M NV+L F E ALRVIAKKA + TGARGLR+I+E IL E M+E+P ++ Sbjct: 332 LVKQYQRLFEMENVELAFHEDALRVIAKKAIERKTGARGLRSIMEKILLETMFELPTLE 390
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_BARHE (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bartonella henselae GN=clpX PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.254e-13 Identity = 37/56 (66.07%), Postives = 44/56 (78.57%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 168 L KQY+RLF M NV+L F E ALRVIAKKA + TGARGLR+I+E IL E M+E+P Sbjct: 332 LVKQYQRLFEMENVELAFHEDALRVIAKKAIERKTGARGLRSIMEKILLETMFELP 387
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_PARL1 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=clpX PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.862e-13 Identity = 34/59 (57.63%), Postives = 48/59 (81.36%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 L KQY+RLF M NV+L F+E+ALR +++KA + TGARGLR+ILESIL + M+E+P ++ Sbjct: 330 LVKQYERLFEMENVRLTFSEEALRAVSRKAIERKTGARGLRSILESILLDTMFELPTLE 388
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_CHRSD (ATP-dependent Clp protease ATP-binding subunit clpX OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=clpX PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 8.962e-13 Identity = 34/57 (59.65%), Postives = 44/57 (77.19%), Query Frame = 1 Query: 7 KQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 KQY LF+M V+L F E ALR +A KA A+NTGARGLR+ILES+L + MYE+P ++ Sbjct: 335 KQYVHLFAMEGVELEFREDALRAVAHKAMARNTGARGLRSILESVLLDTMYEVPSLE 391
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_SYMTH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Symbiobacterium thermophilum GN=clpX PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.170e-12 Identity = 32/56 (57.14%), Postives = 46/56 (82.14%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 168 L KQY++L ++N++L F E+A+R IAK+A +NTGARGLRAI+E I+T+ MYE+P Sbjct: 329 LVKQYQKLLQLDNIELEFEEEAVRAIAKEALRRNTGARGLRAIIEDIMTDVMYEVP 384
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_BART1 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=clpX PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.529e-12 Identity = 36/56 (64.29%), Postives = 43/56 (76.79%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 168 L KQY+RLF M NV+L F E ALR IAKKA + TGARGLR+I+E IL E M+E+P Sbjct: 332 LVKQYQRLFEMENVELAFHEDALRAIAKKAIERKTGARGLRSIMEKILLETMFELP 387
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_ACIAD (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acinetobacter sp. (strain ADP1) GN=clpX PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.529e-12 Identity = 35/59 (59.32%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 L +QY+ LF M NV L F E ALR IAKKA +NTGARGLR+I+E++L E MY++P K Sbjct: 332 LTRQYQSLFQMENVDLVFEESALRAIAKKALERNTGARGLRSIMENVLLETMYDLPSRK 390
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_SHEDO (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=clpX PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.997e-12 Identity = 35/59 (59.32%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 L KQY LF M NV+L F E AL+ IAKKA ++ TGARGLR+I+E IL + MY++P VK Sbjct: 334 LTKQYGALFEMENVELEFREDALKAIAKKAMSRKTGARGLRSIVEGILLDTMYDLPTVK 392
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_METS4 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Methylobacterium sp. (strain 4-46) GN=clpX PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.997e-12 Identity = 35/56 (62.50%), Postives = 44/56 (78.57%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 168 L KQY+RLF M NV L F E+AL ++A+KA + TGARGLR+ILESIL E MY++P Sbjct: 330 LVKQYQRLFEMENVDLTFQEEALTLVARKAIERKTGARGLRSILESILLETMYDLP 385
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_METNO (ATP-dependent Clp protease ATP-binding subunit clpX OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=clpX PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.997e-12 Identity = 35/56 (62.50%), Postives = 44/56 (78.57%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 168 L KQY+RLF M NV L F E+AL ++A+KA + TGARGLR+ILESIL E MY++P Sbjct: 330 LVKQYQRLFEMENVDLTFQEEALTLVARKAIERKTGARGLRSILESILLETMYDLP 385 The following BLAST results are available for this feature:
BLAST of CX294110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294110 ID=CX294110; Name=CX294110; organism=Citrus clementina; type=EST; length=538bpback to top |