CX294319
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294319 vs. ExPASy Swiss-Prot
Match: EF1D2_ARATH (Elongation factor 1-delta 2 OS=Arabidopsis thaliana GN=At2g18110 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.493e-36 Identity = 87/178 (48.88%), Postives = 100/178 (56.18%), Query Frame = 1 Query: 49 AFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXXAPV------ATXXXXXXXXXXXXXXXXXXXLFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQMEGLLCGASKL 564 AF N+NS +GLKKLDE+LLTRSYITGYQASKDDITV++ALSK P+SE+VNVSRW+ HIDALLRI +P+ LFG VL+D+KPWDDETDMKKLEEAVRS+QMEGL GASKL Sbjct: 3 AFPNLNSGSGLKKLDEHLLTRSYITGYQASKDDITVFTALSKPPTSEFVNVSRWFNHIDALLRISGVSAEGSGVIVEGSSPITEEAVATPPAADSKDTAAEEEDDDDVDLFGEETEEEKKAAEERAASVKASTKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKL 180
BLAST of CX294319 vs. ExPASy Swiss-Prot
Match: EF1D1_ARATH (Elongation factor 1-delta 1 OS=Arabidopsis thaliana GN=At1g30230 PE=2 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 5.674e-36 Identity = 86/178 (48.31%), Postives = 98/178 (55.06%), Query Frame = 1 Query: 49 AFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXXAPV------ATXXXXXXXXXXXXXXXXXXXLFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQMEGLLCGASKL 564 AF N+NS GLKKLDE+LLTRSYITGYQASKDDITV++AL+K P+S+YVN SRWY HIDALLRI AP+ LFG VL+D+KPWDDETDMKKLEEAV+S+QMEGL GASKL Sbjct: 3 AFPNLNSDAGLKKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVNASRWYNHIDALLRISGVSAEGSGVIVEGSAPITEEAVATPPAADSKDAAADEEDDDDVDLFGEETEEEKKAAEERAASVKASTKKKESGKSSVLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKL 180
BLAST of CX294319 vs. ExPASy Swiss-Prot
Match: EF1D1_ORYSJ (Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica GN=Os07g0614500 PE=2 SV=3) HSP 1 Score: 144.821 bits (364), Expect = 3.113e-34 Identity = 88/178 (49.44%), Postives = 98/178 (55.06%), Query Frame = 1 Query: 40 MAVAFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXXA-PVAT--XXXXXXXXXXXXXXXXXXXLFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQMEGLLCGASKL 564 MAV+F NV+S GLKKLDEYLLTRSYI+GYQAS DD+ VYSA S APSS Y NV+RW+ HIDALLR+ A P A+ LFG VLLDVKPWDDETDM KLEEAVR+V+MEGLL GASKL Sbjct: 1 MAVSFTNVSSEAGLKKLDEYLLTRSYISGYQASNDDLAVYSAFSTAPSSSYTNVARWFTHIDALLRLSGVTADGQGVKVESTAVPSASTPDVADAKAPAADDDDDDDVDLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRNVKMEGLLWGASKL 178
BLAST of CX294319 vs. ExPASy Swiss-Prot
Match: EF1D_PIMBR (Elongation factor 1-delta OS=Pimpinella brachycarpa PE=2 SV=3) HSP 1 Score: 144.05 bits (362), Expect = 5.310e-34 Identity = 81/175 (46.29%), Postives = 98/175 (56.00%), Query Frame = 1 Query: 40 MAVAFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXXAPVATXXXXXXXXXXXXXXXXXXXLFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQMEGLLCGASKL 564 MAV F +++S GL+KLDEYLL+RSYI+GYQASKDD+ V++AL+K PSS+YVNVSRWY H++ALLRI + LFG VLLDVKPWDDETDM KLEEAVRS++M+GLL GASKL Sbjct: 1 MAVTFYDLSSEAGLEKLDEYLLSRSYISGYQASKDDLAVHAALAKPPSSKYVNVSRWYNHVEALLRISGVSAEGCGVTVEGSSVATPPVADTKASAAEDDDDDDVDLFGEETEEEKKASEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRSIKMDGLLWGASKL 175
BLAST of CX294319 vs. ExPASy Swiss-Prot
Match: EF1D2_ORYSJ (Elongation factor 1-delta 2 OS=Oryza sativa subsp. japonica GN=Os03g0406200 PE=2 SV=3) HSP 1 Score: 143.28 bits (360), Expect = 9.058e-34 Identity = 82/175 (46.86%), Postives = 95/175 (54.29%), Query Frame = 1 Query: 40 MAVAFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXXAPVATXXXXXXXXXXXXXXXXXXXLFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQMEGLLCGASKL 564 MA+ NVNS GL+KLDEYLLTRSYI+GYQASKDD+TV+++L AP++ YVNV+RWY HI ALLR A + LFG VLLDVKPWDDETDM KLEEAVR+V+MEGLL GASKL Sbjct: 1 MAITLSNVNSEAGLQKLDEYLLTRSYISGYQASKDDMTVFTSLPSAPAASYVNVTRWYDHISALLRSSGVTAEGEGVKVESTACSVSPTADQKAPAADEEDDDDVDLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMAKLEEAVRNVKMEGLLWGASKL 175
BLAST of CX294319 vs. ExPASy Swiss-Prot
Match: EF1D_BETVU (Elongation factor 1-delta OS=Beta vulgaris PE=2 SV=3) HSP 1 Score: 139.428 bits (350), Expect = 1.308e-32 Identity = 89/180 (49.44%), Postives = 97/180 (53.89%), Query Frame = 1 Query: 40 MAVAFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXXAP---VAT-XXXXXXXXXXXXXXXXXXXLFG-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQMEGLLCGASKL 564 MAV F +++S GL LD YLL+RSYITGYQASKDD+TV+SA+ KA + YVNVSRWYKHIDALLRI AP VAT LFG VLLDVKPWDDETDMKKLEEAVRSVQ EGL GASKL Sbjct: 1 MAVTFSDLSSPAGLDSLDAYLLSRSYITGYQASKDDLTVFSAVPKASLASYVNVSRWYKHIDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADDDDDDDVDLFGEETEEEKKAAEERAAAAAAKPAKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQQEGLTLGASKL 180
BLAST of CX294319 vs. ExPASy Swiss-Prot
Match: EF1B_DROME (Probable elongation factor 1-beta OS=Drosophila melanogaster GN=Ef1beta PE=1 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 9.746e-12 Identity = 31/59 (52.54%), Postives = 45/59 (76.27%), Query Frame = 1 Query: 46 VAFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKHI 222 +AF +V + GLK+L+ +L SYI+GY SK D++V+ AL KAPS++ VNV+RWY+HI Sbjct: 1 MAFGDVTTPQGLKELNAFLADNSYISGYTPSKADLSVFDALGKAPSADNVNVARWYRHI 59
BLAST of CX294319 vs. ExPASy Swiss-Prot
Match: EF1B_ORYSJ (Elongation factor 1-beta OS=Oryza sativa subsp. japonica GN=Os07g0662500 PE=1 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 1.662e-11 Identity = 34/36 (94.44%), Postives = 34/36 (94.44%), Query Frame = 1 Query: 457 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLCGASKL 564 VLLDVKPWDDETDMKKLEEAVRSVQMEGL GASKL Sbjct: 138 VLLDVKPWDDETDMKKLEEAVRSVQMEGLTWGASKL 173
BLAST of CX294319 vs. ExPASy Swiss-Prot
Match: EF1B_WHEAT (Elongation factor 1-beta OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 3.703e-11 Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = 1 Query: 457 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLCGASKL 564 VL+D+KPWDDETDMKKLEEAVRSVQMEGL GASKL Sbjct: 132 VLMDIKPWDDETDMKKLEEAVRSVQMEGLTWGASKL 167 The following BLAST results are available for this feature:
BLAST of CX294319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294319 ID=CX294319; Name=CX294319; organism=Citrus clementina; type=EST; length=601bpback to top |