CX294348
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294348 vs. ExPASy Swiss-Prot
Match: ST7R_ARATH (7-dehydrocholesterol reductase OS=Arabidopsis thaliana GN=DWF5 PE=1 SV=1) HSP 1 Score: 342.428 bits (877), Expect = 8.494e-94 Identity = 155/175 (88.57%), Postives = 166/175 (94.86%), Query Frame = 3 Query: 15 GIFNPTIVYDHLGEIYSALIFGSFIFCIFLYIKGHLAPSSTDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQYEANAKVEDSMLVNTILMLIYVTKFFLWEAGYWSTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVHLGTQVSSVLL 539 GIFNP IVYDHLGEI+SALIFGSFIFC+ LYIKGH+APSS+DSGSCGN+IIDFYWGMELYPRIGK+FDIKVFTNCRFGMMSWAVLAVTYCIKQYE N KV DSMLVNTILML+YVTKFF WEAGYW+TMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPV LGTQ++ +L Sbjct: 124 GIFNPAIVYDHLGEIFSALIFGSFIFCVLLYIKGHVAPSSSDSGSCGNLIIDFYWGMELYPRIGKSFDIKVFTNCRFGMMSWAVLAVTYCIKQYEINGKVSDSMLVNTILMLVYVTKFFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVELGTQLAIYIL 298
BLAST of CX294348 vs. ExPASy Swiss-Prot
Match: DHCR7_RAT (7-dehydrocholesterol reductase OS=Rattus norvegicus GN=Dhcr7 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.335e-30 Identity = 70/168 (41.67%), Postives = 102/168 (60.71%), Query Frame = 3 Query: 21 FNPTIVYDH-LGEIYSALIFGSFIFCIFLYIKGHLAPSST-DSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQYEANAKVEDSMLVNTILMLIYVTKFFLWEAGYWSTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVHLGT 518 F+PTI++D+ + ++ A I G + F IKG+L P+S D GN ++ G+E PRIGK FD K+F N R G+++W ++ +++ KQ E V +SM++ +L IYV FF E Y T+DI HD G+Y+ WG VW+P +YT G+YLV HPV L T Sbjct: 164 FSPTIIFDNWIPLLWCANILG-YAVSTFAMIKGYLFPTSAEDCKFTGNFFYNYMMGIEFNPRIGKWFDFKLFFNGRPGIVAWTLINLSFAAKQQELYGHVTNSMILVNVLQAIYVLDFFWNETWYLKTIDICHDHFGWYLGWGDCVWLPYLYTLQGLYLVYHPVQLST 330
BLAST of CX294348 vs. ExPASy Swiss-Prot
Match: DHCR7_MOUSE (7-dehydrocholesterol reductase OS=Mus musculus GN=Dhcr7 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.335e-30 Identity = 70/168 (41.67%), Postives = 102/168 (60.71%), Query Frame = 3 Query: 21 FNPTIVYDH-LGEIYSALIFGSFIFCIFLYIKGHLAPSST-DSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQYEANAKVEDSMLVNTILMLIYVTKFFLWEAGYWSTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVHLGT 518 F+PTI++D+ + ++ A I G + F IKG+L P+S D GN ++ G+E PRIGK FD K+F N R G+++W ++ +++ KQ E V +SM++ +L IYV FF E Y T+DI HD G+Y+ WG VW+P +YT G+YLV HPV L T Sbjct: 164 FSPTIIFDNWIPLLWCANILG-YAVSTFAMIKGYLFPTSAEDCKFTGNFFYNYMMGIEFNPRIGKWFDFKLFFNGRPGIVAWTLINLSFAAKQQELYGHVTNSMILVNVLQAIYVLDFFWNETWYLKTIDICHDHFGWYLGWGDCVWLPYLYTLQGLYLVYHPVQLST 330
BLAST of CX294348 vs. ExPASy Swiss-Prot
Match: DHCR7_BOVIN (7-dehydrocholesterol reductase OS=Bos taurus GN=DHCR7 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.744e-30 Identity = 72/172 (41.86%), Postives = 104/172 (60.47%), Query Frame = 3 Query: 15 GIFNPTIVYDH-LGEIYSALIFGSFIFCIFLYIKGHLAPSSTDSGSC---GNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQYEANAKVEDSMLVNTILMLIYVTKFFLWEAGYWSTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVHLGT 518 G F+PTI++D+ + ++ A I G + F +KG+L P TD+ C GN ++ G+E PRIGK FD K+F N R G+++W ++ +++ KQ E V +SM++ IL IYV FF E Y T+DI HD G+Y+ WG VW+P +YT G+YLV HPV L T Sbjct: 166 GWFSPTIIFDNWIPLLWCANILG-YTVSTFAMVKGYLFP--TDARECKFTGNFFYNYMMGVEFNPRIGKWFDFKLFFNGRPGIVAWTLINLSFAAKQQELYGHVTNSMVLVNILQAIYVLDFFWNETWYLKTIDICHDHFGWYLGWGDCVWLPYLYTLQGLYLVYHPVQLPT 334
BLAST of CX294348 vs. ExPASy Swiss-Prot
Match: DHCR7_HUMAN (7-dehydrocholesterol reductase OS=Homo sapiens GN=DHCR7 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 6.625e-30 Identity = 67/168 (39.88%), Postives = 103/168 (61.31%), Query Frame = 3 Query: 21 FNPTIVYDH-LGEIYSALIFGSFIFCIFLYIKGHLAPSST-DSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQYEANAKVEDSMLVNTILMLIYVTKFFLWEAGYWSTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVHLGT 518 F+PTI++D+ + ++ A I G + F +KG+ P+S D GN ++ G+E PRIGK FD K+F N R G+++W ++ +++ KQ E ++ V ++M++ +L IYV FF E Y T+DI HD G+Y+ WG VW+P +YT G+YLV HPV L T Sbjct: 168 FSPTIIFDNWIPLLWCANILG-YAVSTFAMVKGYFFPTSARDCKFTGNFFYNYMMGIEFNPRIGKWFDFKLFFNGRPGIVAWTLINLSFAAKQRELHSHVTNAMVLVNVLQAIYVIDFFWNETWYLKTIDICHDHFGWYLGWGDCVWLPYLYTLQGLYLVYHPVQLST 334
BLAST of CX294348 vs. ExPASy Swiss-Prot
Match: DHCR7_XENLA (7-dehydrocholesterol reductase OS=Xenopus laevis GN=dhcr7 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.928e-29 Identity = 68/177 (38.42%), Postives = 105/177 (59.32%), Query Frame = 3 Query: 21 FNPTIVYDH-LGEIYSALIFGSFIFCIFLYIKGHLAPSST-DSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQYEANAKVEDSMLVNTILMLIYVTKFFLWEAGYWSTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVHLGTQVSSVLLFV 545 F+PTIV D+ + ++ A + G + F +K + P++ D GN D+ G+E PRIGK FD K+F N R G+++W ++ ++Y KQ E +V +SM++ +L IYV FF E+ Y T+DI HD G+Y+ WG VW+P +YT G+YLV +PV L T + +L + Sbjct: 166 FSPTIVIDNWIPLLWCANLLG-YSVATFALVKANFFPTNANDCKFTGNFFYDYMMGIEFNPRIGKWFDFKLFFNGRPGIVAWTLINLSYAAKQQELYGQVTNSMILVNVLQAIYVVDFFWNESWYLKTIDICHDHFGWYLGWGDCVWLPYLYTLQGLYLVYNPVELSTTAAVAVLLL 341
BLAST of CX294348 vs. ExPASy Swiss-Prot
Match: DHCR7_DANRE (7-dehydrocholesterol reductase OS=Danio rerio GN=dhcr7 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.294e-29 Identity = 65/176 (36.93%), Postives = 103/176 (58.52%), Query Frame = 3 Query: 21 FNPTIVYDHLGEIYSALIFGSFIFCIFLYIKGHLAPSST-DSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQYEANAKVEDSMLVNTILMLIYVTKFFLWEAGYWSTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVHLGTQVSSVLLFV 545 F+PTI+ D+ + + F +IK +L P++ D GN+ ++ G+E PRIGK FD K+F N R G+++W ++ ++Y KQ E V +SM++ +L +YV FF EA Y T+DI HD G+Y+ WG VW+P +YT G+YLV +P+ L T ++ +L + Sbjct: 171 FSPTIIIDNWIPLLWCTNILGYAVSTFAFIKAYLFPTNPEDCKFTGNMFYNYMMGIEFNPRIGKWFDFKLFFNGRPGIVAWTLINLSYAAKQQELYGYVTNSMILVNVLQAVYVVDFFWNEAWYLKTIDICHDHFGWYLGWGDCVWLPFLYTLQGLYLVYNPIQLSTPHAAGVLIL 346
BLAST of CX294348 vs. ExPASy Swiss-Prot
Match: DHCR7_XENTR (7-dehydrocholesterol reductase OS=Xenopus tropicalis GN=dhcr7 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 7.325e-29 Identity = 65/176 (36.93%), Postives = 100/176 (56.82%), Query Frame = 3 Query: 21 FNPTIVYDHLGEIYSALIFGSFIFCIFLYIKGHLAPSST-DSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQYEANAKVEDSMLVNTILMLIYVTKFFLWEAGYWSTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVHLGTQVSSVLLFV 545 F+PTI+ D+ + + F +K + P++ D GN D+ G+E PRIGK FD K+F N R G+++W ++ ++Y KQ E +V +SM++ +L IYV FF E+ Y T+DI HD G+Y+ WG VW+P +YT G+YLV +PV L T + +L + Sbjct: 166 FSPTIIIDNWVPLLWCANLLGYSVATFALLKAYFFPTNAHDCKFTGNFFYDYMMGIEFNPRIGKWFDFKLFFNGRPGIVAWTLINLSYAAKQQELYGQVTNSMILVNVLQAIYVVDFFWNESWYLKTIDICHDHFGWYLGWGDCVWLPYLYTLQGLYLVYNPVELSTATAVGVLLL 341
BLAST of CX294348 vs. ExPASy Swiss-Prot
Match: DHCR7_MIMIV (Probable 7-dehydrocholesterol reductase OS=Acanthamoeba polyphaga mimivirus GN=DHCR7 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.430e-24 Identity = 61/169 (36.09%), Postives = 95/169 (56.21%), Query Frame = 3 Query: 15 GIFNPTIVYDHLGEIYSALIFGSFIFCIFLYIKGHLAPSS-TDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQYEANAKVEDSMLVNTILMLIYVTKFFLWEAGYWSTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVHLGT 518 G+F+PTI+ D+ G I+ ++ ++ Y K S +D+ G + D G+E P I D+K+F N R G+++W ++ ++ +KQYE V +SM++ IL LIY+ FF E Y T+DIAHD G+ + WG VW+P YT YL+N+P+ L T Sbjct: 146 GLFSPTIIMDNWGSIFWSVNIIGYLITFLAYFKALTFSSHPSDNKFTGKLFYDIVMGIEFNPEIFGT-DLKLFFNGRPGIIAWNLINLSCAMKQYENFGYVSNSMILVIILQLIYIVDFFYNENWYVHTVDIAHDHFGWMLAWGDTVWLPFGYTLQAGYLMNNPIDLST 313
BLAST of CX294348 vs. ExPASy Swiss-Prot
Match: LBR_RAT (Lamin-B receptor OS=Rattus norvegicus GN=Lbr PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.133e-21 Identity = 58/171 (33.92%), Postives = 88/171 (51.46%), Query Frame = 3 Query: 36 VYDHLGEIYSALIFGSFIFCIFLYIKGHLAPSSTDS-GSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQYEANAKVEDSMLVNTI--LMLIYVTKFFLWEAGYWSTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVHLGTQVSSVLL 539 +Y H + A I S + ++LY + P S S GN + DF+ G EL PRIG FD+K F R G++ W V+ + + + + + S+ + + L+YV +E +TMDI HD GF + +G LVWVP Y+ YLVNHP L ++SV++ Sbjct: 327 LYTHFLQFALAAIVFSVVLSVYLYARSLKVPRDELSPASSGNAVYDFFIGRELNPRIGA-FDLKFFCELRPGLIGWVVINLVMLLAEMKVQERSAPSLAMTLVNSFQLLYVVDALWFEEALLTTMDIIHDGFGFMLAFGDLVWVPFTYSLQAFYLVNHPQDLSWPLTSVII 496 The following BLAST results are available for this feature:
BLAST of CX294348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294348 ID=CX294348; Name=CX294348; organism=Citrus clementina; type=EST; length=554bpback to top |