CX294350
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294350 vs. ExPASy Swiss-Prot
Match: MSBP2_ARATH (Membrane steroid-binding protein 2 OS=Arabidopsis thaliana GN=MSBP2 PE=1 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 8.515e-66 Identity = 105/118 (88.98%), Postives = 110/118 (93.22%), Query Frame = 2 Query: 125 HQQRSREYEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGS 478 H+ RS E + Q EPLPPPVQLGEITEEELK YDGSDSKKPLLMAIK QIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFE++DLTGDISGLG FELEALQDWEYKFMSKYVKVG+ Sbjct: 48 HRPRSLEVQPQSEPLPPPVQLGEITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEDQDLTGDISGLGAFELEALQDWEYKFMSKYVKVGT 165 HSP 2 Score: 57.3806 bits (137), Expect = 8.515e-66 Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = 1 Query: 1 TLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMF 105 TLKE ITAYTGLSPAAFFTV+AL +A+Y V+SG F Sbjct: 8 TLKETITAYTGLSPAAFFTVLALAFAVYQVVSGFF 42
BLAST of CX294350 vs. ExPASy Swiss-Prot
Match: MSBP1_ARATH (Membrane steroid-binding protein 1 OS=Arabidopsis thaliana GN=MSBP1 PE=1 SV=2) HSP 1 Score: 202.601 bits (514), Expect = 1.309e-60 Identity = 97/120 (80.83%), Postives = 107/120 (89.17%), Query Frame = 2 Query: 119 NHHQQRSREYEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGS 478 N HQ+ +E+ P+P PVQ+GEITEEELKQYDGSD +KPLLMAIK QIYDV+QSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLT D+SGLGPFEL+ALQDWEYKFMSKY KVG+ Sbjct: 50 NRHQRARSLAQEEEPPIPQPVQVGEITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTWDVSGLGPFELDALQDWEYKFMSKYAKVGT 169 HSP 2 Score: 51.9878 bits (123), Expect = 1.309e-60 Identity = 25/35 (71.43%), Postives = 28/35 (80.00%), Query Frame = 1 Query: 1 TLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMF 105 TLKEAI AYTGLSP FFT +AL +AIY V+SG F Sbjct: 8 TLKEAIHAYTGLSPVVFFTALALAFAIYQVISGWF 42
BLAST of CX294350 vs. ExPASy Swiss-Prot
Match: SBP3_ARATH (Probable steroid-binding protein 3 OS=Arabidopsis thaliana GN=MP3 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 4.273e-23 Identity = 49/95 (51.58%), Postives = 67/95 (70.53%), Query Frame = 2 Query: 191 EITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVG 475 E T E+L QY+G+D KP+ +AIK +++DV+ + FYG GG Y++FAGKDASRAL KMS E+D++ + GL E+ L DWE KF +KY VG Sbjct: 2 EFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSKNEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVG 96
BLAST of CX294350 vs. ExPASy Swiss-Prot
Match: NENF_RAT (Neudesin OS=Rattus norvegicus GN=Nenf PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.195e-19 Identity = 50/102 (49.02%), Postives = 67/102 (65.69%), Query Frame = 2 Query: 173 PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQD-WEYKFMSKYVKVG 475 PPV+L TEEEL +Y G + +P+ +A+K ++DV+ + FYG G PY AGKD+SR +AKMS + DLT DISGL ELEAL D + + +KY VG Sbjct: 41 PPVRL--FTEEELARYSGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDPADLTHDISGLTAKELEALDDIFSKVYKAKYPIVG 140
BLAST of CX294350 vs. ExPASy Swiss-Prot
Match: NENF_MOUSE (Neudesin OS=Mus musculus GN=Nenf PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.426e-18 Identity = 48/102 (47.06%), Postives = 66/102 (64.71%), Query Frame = 2 Query: 173 PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQD-WEYKFMSKYVKVG 475 PPV+L TEEEL +Y G + +P+ +A+K ++DV+ + FYG G PY AGKD+SR +AKMS + DLT D +GL ELEAL D + + +KY VG Sbjct: 41 PPVRL--FTEEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDPADLTHDTTGLTAKELEALDDVFSKVYKAKYPIVG 140
BLAST of CX294350 vs. ExPASy Swiss-Prot
Match: PGRC1_RAT (Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus GN=Pgrmc1 PE=1 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 1.204e-17 Identity = 48/109 (44.04%), Postives = 68/109 (62.39%), Query Frame = 2 Query: 161 EPLP-PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKVG 475 EP P P ++ + T EL++YDG + +LMAI +++DV++ R FYGP GPY +FAG+DASR LA ++ KD D+S L P + E L DW+ +F KY VG Sbjct: 61 EPPPLPRLKPRDFTPAELRRYDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLNDWDSQFTFKYHHVG 168
BLAST of CX294350 vs. ExPASy Swiss-Prot
Match: PGRC1_PIG (Membrane-associated progesterone receptor component 1 OS=Sus scrofa GN=PGRMC1 PE=1 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 2.054e-17 Identity = 46/119 (38.66%), Postives = 71/119 (59.66%), Query Frame = 2 Query: 128 QQRSREYEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKVG 475 Q + + ++ P P ++ + T EL+++DG + +LMAI +++DV++ R FYGP GPY +FAG+DASR LA ++ KD D+S L P + E L DW+ +F KY VG Sbjct: 50 QPAASDSDDDEPPPLPRLKRRDFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLNDWDSQFTFKYHHVG 167
BLAST of CX294350 vs. ExPASy Swiss-Prot
Match: PGRC1_BOVIN (Membrane-associated progesterone receptor component 1 OS=Bos taurus GN=PGRMC1 PE=2 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 2.054e-17 Identity = 46/119 (38.66%), Postives = 71/119 (59.66%), Query Frame = 2 Query: 128 QQRSREYEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKVG 475 Q + + ++ P P ++ + T EL+++DG + +LMAI +++DV++ R FYGP GPY +FAG+DASR LA ++ KD D+S L P + E L DW+ +F KY VG Sbjct: 50 QPAASDSDDDEPPPLPRLKRRDFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLSDWDSQFTFKYHHVG 167
BLAST of CX294350 vs. ExPASy Swiss-Prot
Match: NENF_BOVIN (Neudesin OS=Bos taurus GN=NENF PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.054e-17 Identity = 46/102 (45.10%), Postives = 65/102 (63.73%), Query Frame = 2 Query: 173 PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQD-WEYKFMSKYVKVG 475 PPV+L TEEEL +Y G + +P+ MA+K ++DV+ + FYG G PY GKD++R +AKMS + DLT D +GL ELE+L D + + +KY VG Sbjct: 39 PPVRL--FTEEELARYGGEEEDQPIYMAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDPADLTHDTTGLTAEELESLDDVFTRVYKAKYPIVG 138
BLAST of CX294350 vs. ExPASy Swiss-Prot
Match: PGRC1_MOUSE (Membrane-associated progesterone receptor component 1 OS=Mus musculus GN=Pgrmc1 PE=1 SV=4) HSP 1 Score: 87.8113 bits (216), Expect = 2.683e-17 Identity = 47/109 (43.12%), Postives = 68/109 (62.39%), Query Frame = 2 Query: 161 EPLP-PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKVG 475 EP P P ++ + T EL+++DG + +LMAI +++DV++ R FYGP GPY +FAG+DASR LA ++ KD D+S L P + E L DW+ +F KY VG Sbjct: 61 EPPPLPRLKRRDFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLSDWDSQFTFKYHHVG 168 The following BLAST results are available for this feature:
BLAST of CX294350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294350 ID=CX294350; Name=CX294350; organism=Citrus clementina; type=EST; length=479bpback to top |