CX294960
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294960 vs. ExPASy Swiss-Prot
Match: CCR4E_ARATH (Carbon catabolite repressor protein 4 homolog 5 OS=Arabidopsis thaliana GN=CCR4-5 PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.415e-24 Identity = 63/122 (51.64%), Postives = 71/122 (58.20%), Query Frame = 2 Query: 44 SQSQSLVVGNIHVLFNPNRGDIKLGQIRLFLEKAYKLSQEWGGIPVLLAGDLNSSPNVRSSIVIFD*PALNYLYYVLFNF*DL*PFYDLSFISSHPQSALYQFLASSELDVCQHDRRHISGQ 409 S + LVVGNIHVLFNP RGDIKLGQ+RLFLEKAYKLSQEWG IPV +AGDLNS+ PQSA+Y F+AS++LD HDRR ISGQ Sbjct: 235 SDPRRLVVGNIHVLFNPKRGDIKLGQVRLFLEKAYKLSQEWGNIPVAIAGDLNST----------------------------------------PQSAIYDFIASADLDTQLHDRRQISGQ 316
BLAST of CX294960 vs. ExPASy Swiss-Prot
Match: CCR4C_ARATH (Carbon catabolite repressor protein 4 homolog 3 OS=Arabidopsis thaliana GN=CCR4-3 PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 3.375e-18 Identity = 49/127 (38.58%), Postives = 71/127 (55.91%), Query Frame = 2 Query: 44 SQSQSLVVGNIHVLFNPNRGDIKLGQIRLFLEKAYKLSQEWGGIPVLLAGDLNSSPNVRSSIVIFD*PALNYLYYVLFNF*DL*PFYDLSFISSHPQSALYQFLASSELDVCQHDRRHISGQFAKCR 424 ++S+ +++GNIHVL+NPN+GD+KLGQ+R KA+ LS++WG IP++L GD NS+ P+S LY FLASSEL+V +HD++ +SGQ CR Sbjct: 233 NKSRKILLGNIHVLYNPNQGDVKLGQVRSLCSKAHLLSKKWGDIPIVLCGDFNST----------------------------------------PKSPLYNFLASSELNVMEHDKKELSGQ-KNCR 318
BLAST of CX294960 vs. ExPASy Swiss-Prot
Match: CCR4F_ARATH (Carbon catabolite repressor protein 4 homolog 6 OS=Arabidopsis thaliana GN=CCR4-6 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.816e-11 Identity = 29/54 (53.70%), Postives = 39/54 (72.22%), Query Frame = 2 Query: 50 SQSLVVGNIHVLFNPNRGDIKLGQIRLFLEKAYKLSQEWGGIPVLLAGDLNSSP 211 S +V+ NIHVLFNP RGD KLGQ+R L+KA+ +S+ W P++L GD N +P Sbjct: 324 SHRVVICNIHVLFNPKRGDFKLGQVRTLLDKAHAVSKLWDDAPIVLCGDFNCTP 377 The following BLAST results are available for this feature:
BLAST of CX294960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294960 ID=CX294960; Name=CX294960; organism=Citrus clementina; type=EST; length=725bpback to top |