CX295036
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CITUN (V-type proton ATPase catalytic subunit A OS=Citrus unshiu PE=2 SV=1) HSP 1 Score: 384.8 bits (987), Expect = 2.948e-107 Identity = 192/197 (97.46%), Postives = 193/197 (97.97%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDP-QKRTALVAKFK 593 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDP + ALVAKFK Sbjct: 409 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFK 605 HSP 2 Score: 25.7942 bits (55), Expect = 2.948e-107 Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = 2 Query: 590 QKLHEDLTAGFAPRDELDDE 649 +KLHEDLTAGF L+DE Sbjct: 605 KKLHEDLTAGFR---ALEDE 621
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_ARATH (V-type proton ATPase catalytic subunit A OS=Arabidopsis thaliana GN=VHA-A PE=2 SV=1) HSP 1 Score: 376.326 bits (965), Expect = 7.722e-104 Identity = 187/197 (94.92%), Postives = 190/197 (96.45%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDP-QKRTALVAKFK 593 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE+FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVE+ AGMDGQKITYTLIKHRLGDLFYRLVSQKFEDP + LV KFK Sbjct: 409 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEKFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERAAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEDTLVEKFK 605
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_PHAAU (V-type proton ATPase catalytic subunit A OS=Phaseolus aureus PE=1 SV=3) HSP 1 Score: 374.4 bits (960), Expect = 8.608e-104 Identity = 185/197 (93.91%), Postives = 191/197 (96.95%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDP-QKRTALVAKFK 593 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVE+GAG DGQKITY+LIKHR+GDLFYRLVSQKFEDP + ALV +F+ Sbjct: 409 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGSDGQKITYSLIKHRVGDLFYRLVSQKFEDPAEGEAALVGQFQ 605 HSP 2 Score: 24.6386 bits (52), Expect = 8.608e-104 Identity = 12/20 (60.00%), Postives = 14/20 (70.00%), Query Frame = 2 Query: 590 QKLHEDLTAGFAPRDELDDE 649 QKLHEDL+ GF L+DE Sbjct: 605 QKLHEDLSTGFR---NLEDE 621
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_BRANA (V-type proton ATPase catalytic subunit A OS=Brassica napus PE=2 SV=1) HSP 1 Score: 370.933 bits (951), Expect = 1.605e-102 Identity = 184/197 (93.40%), Postives = 190/197 (96.45%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDP-QKRTALVAKFK 593 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE+FD DFI+IRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVE+GAGMDGQKI+Y+LIKHRLGDLFYRLVSQKFEDP + LV KFK Sbjct: 409 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEKFDSDFIDIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGMDGQKISYSLIKHRLGDLFYRLVSQKFEDPAEGEDVLVGKFK 605 HSP 2 Score: 23.8682 bits (50), Expect = 1.605e-102 Identity = 11/20 (55.00%), Postives = 15/20 (75.00%), Query Frame = 2 Query: 590 QKLHEDLTAGFAPRDELDDE 649 +KLH+DLT+GF L+DE Sbjct: 605 KKLHDDLTSGFR---NLEDE 621
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_DAUCA (V-type proton ATPase catalytic subunit A OS=Daucus carota PE=2 SV=1) HSP 1 Score: 369.392 bits (947), Expect = 4.650e-102 Identity = 184/197 (93.40%), Postives = 189/197 (95.94%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDP-QKRTALVAKFK 593 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE+FD DFI+IRTKAREVLQREDDLNEIVQLVGKDALAE DKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVE+GAGMDGQKI+YTLIKHRLGDLFYRLVSQKFEDP + LV KFK Sbjct: 409 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEKFDSDFIDIRTKAREVLQREDDLNEIVQLVGKDALAETDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGMDGQKISYTLIKHRLGDLFYRLVSQKFEDPAEGEDVLVGKFK 605 HSP 2 Score: 23.8682 bits (50), Expect = 4.650e-102 Identity = 11/20 (55.00%), Postives = 15/20 (75.00%), Query Frame = 2 Query: 590 QKLHEDLTAGFAPRDELDDE 649 +KLH+DLT+GF L+DE Sbjct: 605 KKLHDDLTSGFR---NLEDE 621
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_GOSHI (V-type proton ATPase catalytic subunit A OS=Gossypium hirsutum GN=CVA69.24 PE=2 SV=1) HSP 1 Score: 364.77 bits (935), Expect = 1.925e-100 Identity = 183/197 (92.89%), Postives = 188/197 (95.43%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDP-QKRTALVAKFK 593 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYS ALESFYE+FDPDFI+IRTKAREVLQREDDLNEIVQLVGKDALAE DKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNI+HF LANQAVEK AGMDGQKITY+LIKHRLGDLFYRLVSQKFEDP + ALVAKFK Sbjct: 409 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSGALESFYEKFDPDFISIRTKAREVLQREDDLNEIVQLVGKDALAETDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIVHFNALANQAVEKAAGMDGQKITYSLIKHRLGDLFYRLVSQKFEDPAEGEEALVAKFK 605 HSP 2 Score: 23.0978 bits (48), Expect = 1.925e-100 Identity = 12/20 (60.00%), Postives = 15/20 (75.00%), Query Frame = 2 Query: 590 QKLHEDLTAGFAPRDELDDE 649 +KL+EDLTAGF L+DE Sbjct: 605 KKLNEDLTAGFR---ALEDE 621
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_MAIZE (V-type proton ATPase catalytic subunit A (Fragment) OS=Zea mays PE=2 SV=1) HSP 1 Score: 358.992 bits (920), Expect = 1.276e-98 Identity = 179/197 (90.86%), Postives = 185/197 (93.91%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDP-QKRTALVAKFK 593 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYS ALESFYE+FDPDFI+IRTKAREVLQREDDLNEIVQLVGKDALAE DKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHF LANQAVE+ AG DG KITY++IKHRLGDLFYRLVSQKFEDP + ALV KFK Sbjct: 347 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSKALESFYEKFDPDFIDIRTKAREVLQREDDLNEIVQLVGKDALAESDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFNTLANQAVERAAGTDGHKITYSVIKHRLGDLFYRLVSQKFEDPAEGEEALVGKFK 543
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_BETVU (V-type proton ATPase catalytic subunit A OS=Beta vulgaris PE=2 SV=1) HSP 1 Score: 357.451 bits (916), Expect = 3.712e-98 Identity = 180/197 (91.37%), Postives = 187/197 (94.92%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDP-QKRTALVAKFK 593 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYS ALESFYE+FD +FI+IRTKAREVLQREDDLNEIVQLVGKDALAE DKITL+TAKLLREDYLAQNAFT YDKFCPFYKSVWMMRNIIHFYNLANQAVE+GAG DGQKITY+LIK RLGDLFYRLVSQKFEDP + ALVAKFK Sbjct: 409 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSGALESFYEKFDSEFIDIRTKAREVLQREDDLNEIVQLVGKDALAETDKITLDTAKLLREDYLAQNAFTAYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGSDGQKITYSLIKLRLGDLFYRLVSQKFEDPAEGEDALVAKFK 605
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_HORVU (V-type proton ATPase catalytic subunit A (Fragment) OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 343.199 bits (879), Expect = 1.948e-94 Identity = 169/197 (85.79%), Postives = 180/197 (91.37%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDP-QKRTALVAKFK 593 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALE +YE+FDP FI++RTKAREVLQREDDLNEIVQLVGKDAL E DKITLETAKLLREDYLAQNAFTPYDK+CPFYKSVWMMRNIIHF LANQAVE+ A DG KITY ++K R+GDLFYRLVSQKFEDP + LVAKF+ Sbjct: 366 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALEGYYEKFDPGFIDMRTKAREVLQREDDLNEIVQLVGKDALGESDKITLETAKLLREDYLAQNAFTPYDKYCPFYKSVWMMRNIIHFNQLANQAVERAANADGHKITYAVVKSRMGDLFYRLVSQKFEDPAEGEDVLVAKFQ 562 HSP 2 Score: 24.6386 bits (52), Expect = 1.948e-94 Identity = 12/22 (54.55%), Postives = 16/22 (72.73%), Query Frame = 2 Query: 590 QKLHEDLTAGFAPRDELDDEGQ 655 QKL++DLTAGF L+DE + Sbjct: 562 QKLYDDLTAGFR---NLEDEAR 580
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA1_ACEAT (V-type proton ATPase catalytic subunit A isoform 1 OS=Acetabularia acetabulum PE=2 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 8.597e-79 Identity = 144/194 (74.23%), Postives = 164/194 (84.54%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA--GMDGQKITYTLIKHRLGDLFYRLVSQKFEDPQKRTALV 581 IVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPSVNWLISYSKY ALE FYE+FD DF+ +R AREVLQ+ED+LNEIVQLVGKDALAE DKI LETA+ L+EDYL QN+FT YDK+CPFYKSV MMRNI+ F+ LA QA+E+ A +DGQKIT+ +IK +LGDL Y++ SQKFEDP +V Sbjct: 397 IVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYLNALEPFYEKFDSDFVTLRQVAREVLQKEDELNEIVQLVGKDALAESDKIILETARFLKEDYLQQNSFTKYDKYCPFYKSVGMMRNIVTFHRLATQAIERTAAGNVDGQKITFNIIKAKLGDLLYKVSSQKFEDPSDGEGVV 590 The following BLAST results are available for this feature:
BLAST of CX295036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295036 ID=CX295036; Name=CX295036; organism=Citrus clementina; type=EST; length=670bpback to top |