CX295169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295169 vs. ExPASy Swiss-Prot
Match: FDL37_ARATH (F-box/FBD/LRR-repeat protein At5g53840 OS=Arabidopsis thaliana GN=At5g53840 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.552e-12 Identity = 57/196 (29.08%), Postives = 89/196 (45.41%), Query Frame = 3 Query: 138 EDWFSKFPDDILVNLISRLTLKEAARTSVLSSRWKYLWNFTTALDFAGIGKDIIFPSKEEK--SEYVCWVNKILSLHKGSNINKFRIRCTLDNSHGRDITNWIYTATAKKVQNFELDFWPPSHINDYAFPLERYNFLKRGH-----------GLSGIKSLRSLCLNALKVSGE-VLEFFIHSCPHLEHLYVANSSE 683 E+ S+ PD ++ ++S L+ K+A RTS+LS+RW+ LW LD F S+E + SE+V + LHK S I K R+ C D + +T+WI T ++Q+ ++ + S PL Y H + L+ L L+ + + E L+ I P LE L + SSE Sbjct: 17 EERLSQLPDHLICVILSHLSTKDAVRTSILSTRWRNLWQLVPVLD---------FDSRELRSFSEFVSFAGSFFYLHKDSYIQKLRV-CIYDLAGNYYLTSWIDLVTRHRIQHIDISVFTCSGFG--VIPLSLYTCDTLVHLKLSRVTMVNVEFVSLPCLKILDLDFVNFTNETTLDKIISCSPVLEELTIVKSSE 200
BLAST of CX295169 vs. ExPASy Swiss-Prot
Match: FDL1_ARATH (F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana GN=At1g13570 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.552e-12 Identity = 55/198 (27.78%), Postives = 95/198 (47.98%), Query Frame = 3 Query: 141 DWFSKFPDDILVNLISRLTLKEAARTSVLSSRWKYLWNFTTALDFAGIGKDIIFPSKEE---KSEYVCWVNKILSLHKGSNINKFRIRCTLDNSHGRDITNWIYTATAKKVQNFELDFWPPSHINDYAFPLERYNFLK------------RGHGLSGIKSLRSLCLNALKVSGEVLEFFIHSCPHLEHLYVANSSELL 689 D+ S P I+ N+++RL++++A RTSVLSS+W+Y W+ T L F + + PS + ++ V ++ +L LH+G I+KF++ + DI W+ + ++ L ++ P +N LK G L+SL L+ + V+ EV+E I CP LE L ++ L+ Sbjct: 6 DFISDLPQSIIENILTRLSIRDAIRTSVLSSKWRYKWSTLTDLVF---DEKCVSPSNDRCVVETNLVRFITGVLLLHQGP-IHKFQLSTSFKQCR-PDIDQWLLFLSRNGIKELVLKLGE----GEFRVPACLFNCLKLTCLELCHCEFDPPQYFKGFSYLKSLNLHQILVAPEVIESLISGCPLLEFLSLSYFDSLV 194
BLAST of CX295169 vs. ExPASy Swiss-Prot
Match: FBL82_ARATH (F-box/LRR-repeat protein At5g22700 OS=Arabidopsis thaliana GN=At5g22700 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.027e-12 Identity = 51/201 (25.37%), Postives = 94/201 (46.77%), Query Frame = 3 Query: 132 NMEDWFSKFPDDILVNLISRLTLKEAARTSVLSSRWKYLWNFTTALDFAGIGKDIIFPSKEEKSEYVCWVNKILSLHKGSNINKFRIRCTLDNSHGRDITNWIYTATAKKVQNFELD---------FWPPSHINDYAFPLERYNFLKRGHGLSGIKSLRSLCLNA-LKVSGEVLEFFIHSCPHLEHLYVANSSELLALRLL 704 N D S PD++L ++S L K A TS+LS+RW+ +W T L DI + ++ + +V + ++ L K S ++KF++ D+ I WI A +++Q+ E+D + ++++ L + + + +L+ + L + E LE FI SCP LE L V +++ ++L Sbjct: 3 NRGDRISSLPDELLCQILSNLPTKNAVTTSILSTRWRSIWLSTPVL-------DIDIDAFDDATTFVSFASRFLEFSKDSCLHKFKLSVERDDVDMCTIMPWIQDAVNRRIQHLEVDCRFSFHFEAVYLTLYLSETLVSLRLHFVTLHRYEFVSLPNLKVMHLEENIYYCLETLENFISSCPVLEDLTVVRIVDIITEKIL 196
BLAST of CX295169 vs. ExPASy Swiss-Prot
Match: FBL56_ARATH (Putative F-box/LRR-repeat protein At3g58880 OS=Arabidopsis thaliana GN=At3g58880 PE=4 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.458e-12 Identity = 63/200 (31.50%), Postives = 95/200 (47.50%), Query Frame = 3 Query: 135 MEDWFSKFPDDILVNLISRLTLKEAARTSVLSSRWKYLWNFTTALDFAGIGKDIIFPSKEE--------KSEYVCWVNKILSLHKGSNINKFRIRCTLDNSHGRDITN-WIYTATAKKVQNFELDFWPPSHINDYAFPLERYNF-LKRGHG---------LSGIKSLRSLCLNALKVSGE-VLEFFIHSCPHLEHLYVAN 674 M D S PDD+L +++S LT KEAA TS+LS RW+YL F L+F D F + EE + ++ +V+++L+LH S I KF ++C D+ N WI + V +L + R LK G G +S + L++L L+++ S LE + +CP LE L +AN Sbjct: 1 MVDLVSSLPDDLLGHILSLLTTKEAALTSILSKRWRYLIAFVPYLEF----DDSAFLNPEEGKQTREGTRQSFIDFVDRVLALHGDSPIRKFSLKC--KTGVDLDLLNQWICNVLQRGVLLIDLSMDLGHRCMFIEIFMSRTLVELKLGSGCRIAFGPEHISALPMLKTLTLDSVSWSDSGQLERLLSACPALEALNLAN 194
BLAST of CX295169 vs. ExPASy Swiss-Prot
Match: FB207_ARATH (Putative F-box protein At3g58860 OS=Arabidopsis thaliana GN=At3g58860 PE=4 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.458e-12 Identity = 58/199 (29.15%), Postives = 95/199 (47.74%), Query Frame = 3 Query: 141 DWFSKFPDDILVNLISRLTLKEAARTSVLSSRWKYLWNFTTALDFAGIGKDIIFP--SKEEKS----EYVCWVNKILSLHKGSNINKFRIRCTLDNSHGRDITNWIYTATAKKVQNFEL--DFWPPSHINDYAFPLE-----RYNFLKRGHGLS--------GIKSLRSLCLNALKVSGEVLEFFIHSCPHLEHLYVAN 674 D FSK PD+++ +++S L KEAA TSVL+ +W+YL+ F +LDF D + P K EK ++ +V+++L+L S I KF + R + WI + V + L DF +Y+ P E LK G+G+ + L++L L +++ + + +CP LE L + N Sbjct: 7 DLFSKLPDEVISHILSSLPTKEAASTSVLAKKWRYLFAFVPSLDFN--DSDFLHPQEGKREKDGILRSFMDFVDRVLALQGASPIKKFSLNVKTGVDPDR-VDRWICNVLQRGVSHLALFMDF-----EEEYSLPYEISVSKTLVELKTGYGVDLYLWDDDMFLPMLKTLVLESVEFGRGQFQTLLPACPVLEELMLLN 197
BLAST of CX295169 vs. ExPASy Swiss-Prot
Match: FBL65_ARATH (F-box/LRR-repeat protein At3g59210 OS=Arabidopsis thaliana GN=At3g59210 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.516e-12 Identity = 56/198 (28.28%), Postives = 92/198 (46.46%), Query Frame = 3 Query: 138 EDWFSKFPDDILVNLISRLTLKEAARTSVLSSRWKYLWNFTTALDF---AGIGKDIIFPSKEEKSEYVCWVNKILSLHKGSNINKFRIRCTLDNSHGRDITNWIYTATAKKVQNFELD------FWPPSHINDYAFPLERYNFLKRGHGLSGIKSLRSLCLNALKV---------SGEV-LEFFIHSCPHLEHLYVAN 674 +D + PD++L ++S L+ KEAA TS+LS RW+YL+ LDF + ++ +++ S ++ +V+++L L +INKF ++C D D+ WI V + L +W PS + F + LK G LR++CL LK G++ + CP LE L + N Sbjct: 6 KDIINCLPDNLLCQILSNLSTKEAALTSLLSKRWRYLFALVPNLDFDVLPSLHPEVAMQDQDQTS-FIDFVDRVLKLRGKDHINKFSLKCG-DGIEDEDVFPWILNTLRHGVSDLSLHVSPSLVYWLPSKV----FASKTLVRLKIGPKDGPRVKLRNVCLPKLKTLNLDSVVFEEGKIGFAKLLSGCPVLEELSLLN 197
BLAST of CX295169 vs. ExPASy Swiss-Prot
Match: FB93_ARATH (F-box protein At1g80960 OS=Arabidopsis thaliana GN=At1g80960 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.314e-11 Identity = 60/209 (28.71%), Postives = 100/209 (47.85%), Query Frame = 3 Query: 99 LTPADTPEKKENMEDWFSKFPDDILVNLISRLTLKEAARTSVLSSRWKYLWNFTTALDFAGIGKDIIFPSK--EEKSEYVCWVNKILSLHKGSNINKFRIRCTLDNSHGRDITNWI-----------------YTATAKKVQNFELDFWPPSHINDYAFPLERYNFLKRGHGLSGIKSLRSLCLNALKVSGEVLEF--FIHSCPHLEHL 662 +T +D K DW SK PDD+L+ ++SRL+ +EA RTSV+S RW+++WN + L F + K+II + + + + ++++ H+G + I +G + +WI Y +K + F SH + + L Y FL+ H L +LR+L L ++ V+ E+ F + SCP LE L Sbjct: 97 ITVSDDHSVKVKNVDWISKLPDDVLLIILSRLSTEEAIRTSVVSKRWEHVWNQMSHLVF-DMRKNIINSNNTLDGSNPVATLITQVINNHRGHLESCVIIHVPYQGGNGM-LNSWIRLLSCVKRTKVLTLRYHYGTWDRKFKTFNFSPDSLSHPSLMSLSLHSY-FLESSHPLRNCSNLRTLKLLSI-VAPEIGVFNRVLASCPCLEVL 301
BLAST of CX295169 vs. ExPASy Swiss-Prot
Match: FB268_ARATH (Putative F-box protein At5g38390 OS=Arabidopsis thaliana GN=At5g38390 PE=4 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11 Identity = 58/189 (30.69%), Postives = 89/189 (47.09%), Query Frame = 3 Query: 141 DWFSKFPDDILVNLISRLTLKEAARTSVLSSRWKYLWNFTTALDFAGIGKDIIFPSKEEKSEYVCWVNKILSLHKGSNINKFRIRCTLDNSHGRDITNWIYTATAKKVQNFELDFWPPSHIND--YAFP--LERYNFLKRG-------HGLSGIKSLRSLCLNALKVSGEVLEFFIHSCPHLEHLYVAN 674 D S P ++L +++S LT KEAA TSVLS RW+ L F +D + DI + ++ +V+++L+L S INKF + C+ +S D WI + V L + S D FP E +K G G + L++L L ++ +S E E +H+ P LE L + N Sbjct: 2 DLLSNLPYELLCHILSFLTTKEAALTSVLSKRWRNLIAFVPNVDI--VDHDI-------RELFMDFVDRVLALQGNSPINKFSLDCSGVDSDRVDC--WIQNVMVRGVSELNLSIFVDSVFEDDYNLFPKVFENKKLVKLGLSYISWLDGSIFLPMLKTLVLESVLLSVEKFEILLHALPALEELVMNN 179
BLAST of CX295169 vs. ExPASy Swiss-Prot
Match: FBD18_ARATH (FBD-associated F-box protein At5g44490 OS=Arabidopsis thaliana GN=At5g44490 PE=2 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 3.823e-11 Identity = 57/195 (29.23%), Postives = 87/195 (44.62%), Query Frame = 3 Query: 138 EDWFSKFPDDILVNLISRLTLKEAARTSVLSSRWKYLWNFTTALDFAGIGKDIIFPSKEEKSEYVCWVNKILSLHKGSNINKFRIRCTLDNSHGRD----ITNWIYTATAKKVQNFELD--FWPPSHINDYAFPLERY----NFLKRGHG--LSGIKSLRSLCLNALKVSGEV------LEFFIHSCPHLEHLYV 668 ED SK D ++ ++ L KEA TSVLSSRWK +W LD FPS + +V +++K + K N +++ ++ H D +T WI K+++ +++ W + PL Y F R H L ++S+ CL + + V LEFFI SCP LE L + Sbjct: 16 EDLMSKLTDALISQVLFYLPTKEAVSTSVLSSRWKSVWLLIPDLDL----NSSAFPS---NNAFVGFIDKFIDFSKIENSCLHKLKLSIRKEHENDNKSCVTRWIGFVATHKLKHLDVECLLWKKKCLE--VMPLTLYITQTLFYLRLHRVLLGNVESISLPCLKTMHLEQNVYANETCLEFFISSCPVLEDLSI 201
BLAST of CX295169 vs. ExPASy Swiss-Prot
Match: FDL8_ARATH (Putative F-box/FBD/LRR-repeat protein At1g66300 OS=Arabidopsis thaliana GN=At1g66300 PE=4 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11 Identity = 53/219 (24.20%), Postives = 102/219 (46.58%), Query Frame = 3 Query: 75 EQMTKRARLTPADTPEKKENME-DWFSKFPDDILVNLISRLTLKEAARTSVLSSRWKYLWNFTTALDFAGIGKDIIFPSKEEKSEYVCWVNKILSLHKGSNINKFRI--RCTL---DNSHGRDITNWIYTATAKKVQNFELDFWPPSHINDYAFPLERYNFLKRGHGLSGI----------KSLRSLCLNALKVSGEV-LEFFIHSCPHLEHLYVANSS 680 E+ + RL ++ +KK E DW P+ ++ +++ L+ K+ + VLS++W+YLW + G D+ E + +V +V++ LS + S +NKF++ C L + + + WI +KVQ+ +L+ W I + + LK L G+ S++ + L+ +K + ++ LE I C L+ L + S+ Sbjct: 6 EKRVRTKRLCSPESSDKKSGYEVDWVRDLPESLICHVLLNLSTKDVIKNCVLSTKWRYLWRYVP-------GLDLDCSDFTEYNTFVSFVDRFLSTNTESYLNKFKLGFDCDLVGDEETGNAQMARWINDVVKRKVQHLDLE-WGALEIPPIVYVCKSLVSLK----LCGVILPIPEFVCLPSVKVIVLDWVKFANDLALEMLISGCLVLKSLTLCRSN 212 The following BLAST results are available for this feature:
BLAST of CX295169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295169 ID=CX295169; Name=CX295169; organism=Citrus clementina; type=EST; length=706bpback to top |