CX295371
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295371 vs. ExPASy Swiss-Prot
Match: DCP1_ARATH (mRNA-decapping enzyme-like protein OS=Arabidopsis thaliana GN=At1g08370 PE=2 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.010e-27 Identity = 60/76 (78.95%), Postives = 67/76 (88.16%), Query Frame = 1 Query: 76 MSQNGKLMANLDQQSTKLLNLTVLQRIDPFIEEILITAAHVTFYEFNIDLSQWSHKDVEGSLFVVKRTHSLDFSLL 303 MSQNGK++ NLDQ ST+LLNLTVLQRIDP+IEEILITAAHVTFYEFNI+LSQWS KDVEGSLFVVKR+ F + Sbjct: 1 MSQNGKIIPNLDQNSTRLLNLTVLQRIDPYIEEILITAAHVTFYEFNIELSQWSRKDVEGSLFVVKRSTQPRFQFI 76 HSP 2 Score: 121.709 bits (304), Expect = 3.428e-27 Identity = 66/120 (55.00%), Postives = 76/120 (63.33%), Query Frame = 3 Query: 270 QKNTQPRFQFVVMNRRNTDNLVENPLGDFEFEVQVPYLLYRNASQEVNGIWFYNARECEEVQGGLQELDG*PCYSPSH*LKDIEG*NRSIWGVASYCLLRILNAYSKVPQKSKVATSKRQ 629 +++TQPRFQF+VMNRRNTDNLVEN LGDFE+EVQ PYLLYRNASQEVNGIWFYN RECEEV + RIL+AYSKV QK K ++SK + Sbjct: 66 KRSTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQGPYLLYRNASQEVNGIWFYNKRECEEV---------------------------------ATLFNRILSAYSKVNQKPKASSSKSE 152
BLAST of CX295371 vs. ExPASy Swiss-Prot
Match: DCP1B_HUMAN (mRNA-decapping enzyme 1B OS=Homo sapiens GN=DCP1B PE=1 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 1.070e-16 Identity = 24/60 (40.00%), Postives = 38/60 (63.33%), Query Frame = 3 Query: 273 KNTQPRFQFVVMNRRNTDNLVENPLGDFEFEVQVPYLLYRNASQEVNGIWFYNARECEEV 452 ++ P+ F +MNR + +N E D +F++Q P+LLYRNA + GIWFY+ EC+ + Sbjct: 64 RSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEECQRI 123 HSP 2 Score: 46.595 bits (109), Expect = 1.070e-16 Identity = 22/52 (42.31%), Postives = 31/52 (59.62%), Query Frame = 1 Query: 130 LNLTVLQRIDPFIEEILITAAHVTFYEFNIDLSQWSHKDVEGSLFVVKRTHS 285 ++L LQR DP+I I+ A+ V Y F ++W DVEG+LFV R+ S Sbjct: 16 ISLAALQRHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGTLFVYTRSAS 67
BLAST of CX295371 vs. ExPASy Swiss-Prot
Match: DCP1B_PONAB (mRNA-decapping enzyme 1B OS=Pongo abelii GN=DCP1B PE=2 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 1.071e-16 Identity = 24/60 (40.00%), Postives = 38/60 (63.33%), Query Frame = 3 Query: 273 KNTQPRFQFVVMNRRNTDNLVENPLGDFEFEVQVPYLLYRNASQEVNGIWFYNARECEEV 452 ++ P+ F +MNR + +N E D +F++Q P+LLYRNA + GIWFY+ EC+ + Sbjct: 64 RSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEECQRI 123 HSP 2 Score: 46.595 bits (109), Expect = 1.071e-16 Identity = 22/52 (42.31%), Postives = 31/52 (59.62%), Query Frame = 1 Query: 130 LNLTVLQRIDPFIEEILITAAHVTFYEFNIDLSQWSHKDVEGSLFVVKRTHS 285 ++L LQR DP+I I+ A+ V Y F ++W DVEG+LFV R+ S Sbjct: 16 ISLAALQRHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGTLFVYTRSAS 67
BLAST of CX295371 vs. ExPASy Swiss-Prot
Match: DCP1B_BOVIN (mRNA-decapping enzyme 1B OS=Bos taurus GN=DCP1B PE=2 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 8.726e-16 Identity = 24/60 (40.00%), Postives = 37/60 (61.67%), Query Frame = 3 Query: 273 KNTQPRFQFVVMNRRNTDNLVENPLGDFEFEVQVPYLLYRNASQEVNGIWFYNARECEEV 452 ++ P+ F +MNR + +N E D +F +Q P+LLYRNA + GIWFY+ EC+ + Sbjct: 62 RSASPKHGFTIMNRLSMENRTEPITKDLDFLLQDPFLLYRNARLSIYGIWFYDKEECQRI 121 HSP 2 Score: 45.4394 bits (106), Expect = 8.726e-16 Identity = 21/52 (40.38%), Postives = 31/52 (59.62%), Query Frame = 1 Query: 130 LNLTVLQRIDPFIEEILITAAHVTFYEFNIDLSQWSHKDVEGSLFVVKRTHS 285 ++L L+R DP+I I+ A+ V Y F ++W DVEG+LFV R+ S Sbjct: 14 ISLAALRRHDPYISRIVDVASQVALYTFGHRANEWEKTDVEGTLFVYSRSAS 65
BLAST of CX295371 vs. ExPASy Swiss-Prot
Match: DCP1A_MOUSE (mRNA-decapping enzyme 1A OS=Mus musculus GN=Dcp1a PE=1 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 7.089e-15 Identity = 25/61 (40.98%), Postives = 37/61 (60.66%), Query Frame = 3 Query: 270 QKNTQPRFQFVVMNRRNTDNLVENPLGDFEFEVQVPYLLYRNASQEVNGIWFYNARECEEV 452 +++ P F ++NR N NLVE D EF++ P+LLYRNAS + IWFY+ +C + Sbjct: 78 RRSASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDCHRI 138 HSP 2 Score: 41.5874 bits (96), Expect = 7.089e-15 Identity = 21/65 (32.31%), Postives = 36/65 (55.38%), Query Frame = 1 Query: 91 KLMANLDQQSTKLLNLTVLQRIDPFIEEILITAAHVTFYEFNIDLSQWSHKDVEGSLFVVKRTHS 285 +L++ +Q+ ++L L++ DP+I I V Y F +QW D+EG+LFV +R+ S Sbjct: 22 ELLSRAEQE----MSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRSAS 82
BLAST of CX295371 vs. ExPASy Swiss-Prot
Match: DCP1A_HUMAN (mRNA-decapping enzyme 1A OS=Homo sapiens GN=DCP1A PE=1 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 9.218e-15 Identity = 25/61 (40.98%), Postives = 37/61 (60.66%), Query Frame = 3 Query: 270 QKNTQPRFQFVVMNRRNTDNLVENPLGDFEFEVQVPYLLYRNASQEVNGIWFYNARECEEV 452 +++ P F ++NR N NLVE D EF++ P+LLYRNAS + IWFY+ +C + Sbjct: 58 RRSASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDCHRI 118 HSP 2 Score: 41.2022 bits (95), Expect = 9.218e-15 Identity = 19/52 (36.54%), Postives = 29/52 (55.77%), Query Frame = 1 Query: 130 LNLTVLQRIDPFIEEILITAAHVTFYEFNIDLSQWSHKDVEGSLFVVKRTHS 285 ++L L++ DP+I I V Y F +QW D+EG+LFV +R+ S Sbjct: 11 MSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRSAS 62 The following BLAST results are available for this feature:
BLAST of CX295371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295371 ID=CX295371; Name=CX295371; organism=Citrus clementina; type=EST; length=668bpback to top |