CX295454
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295454 vs. ExPASy Swiss-Prot
Match: GLR32_ARATH (Glutamate receptor 3.2 OS=Arabidopsis thaliana GN=GLR3.2 PE=1 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 1.688e-47 Identity = 101/195 (51.79%), Postives = 124/195 (63.59%), Query Frame = 1 Query: 37 VIEELSIPKSRLVALGSPEEYAIALENRTVAAVVDERPYIDLFLSDHCQFSVRGQEFTKSGWGFAFPRDSPLAIDMSTAILTLSENGELQRIHDKWLRKKACXXXXXXXXXXXXXXXXFR---GLFLICGIXXXXXXXXXXXXXXRQFKKY--XXXXXXXXXXXXXXXXXLQTFLSFADEKVDRTKSKLKRKRED 606 +I+EL+I +SRLV LGSP+EYA AL+N TVAA+VDERPY+DLFLS+ C F++RGQEFT+SGWGFAFPRDSPLAIDMSTAIL LSE G+LQ+IHDKWL + C R GLFL+CGI R F ++ LQTFL++ DEK D +K ++KRKR D Sbjct: 708 MIDELNIARSRLVPLGSPKEYAAALQNGTVAAIVDERPYVDLFLSEFCGFAIRGQEFTRSGWGFAFPRDSPLAIDMSTAILGLSETGQLQKIHDKWLSRSNCSNLNGSVSDEDSEQLKLRSFWGLFLVCGISCFIALFIYFFKIVRDFFRHGKYDEEATVPSPESSRSKSLQTFLAYFDEKEDESKRRMKRKRND 902
BLAST of CX295454 vs. ExPASy Swiss-Prot
Match: GLR31_ARATH (Glutamate receptor 3.1 OS=Arabidopsis thaliana GN=GLR3.1 PE=2 SV=2) HSP 1 Score: 183.341 bits (464), Expect = 1.209e-45 Identity = 101/193 (52.33%), Postives = 119/193 (61.66%), Query Frame = 1 Query: 43 EELSIPKSRLVALGSPEEYAIALENRTVAAVVDERPYIDLFLSDHCQFSVRGQEFTKSGWGFAFPRDSPLAIDMSTAILTLSENGELQRIHDKWLRKKAC--XXXXXXXXXXXXXXXXFRGLFLICGIXXXXXXXXXXXXXXRQFKK---YXXXXXXXXXXXXXXXXXLQTFLSFADEKVDRTKSKLKRKRED 606 +EL+I SRLV L SPEEYA AL+N TVAA+VDERPYIDLFLSD+C+F++RGQEFT+ GWGFAFPRDSPLA+DMSTAIL LSE GELQ+IHD+WL K C F G+FL+ GI R F K LQTFL+F DEK + TK +LKRKR + Sbjct: 710 DELNIASSRLVPLASPEEYANALQNGTVAAIVDERPYIDLFLSDYCKFAIRGQEFTRCGWGFAFPRDSPLAVDMSTAILGLSETGELQKIHDRWLSKSNCSSPHGSQSGDSEQLNVHSFWGMFLVVGIACLVALFIHFFKIIRDFCKDTPEVVVEEAIPSPKSSRLTKLQTFLAFVDEKEEETKRRLKRKRNN 902
BLAST of CX295454 vs. ExPASy Swiss-Prot
Match: GLR33_ARATH (Glutamate receptor 3.3 OS=Arabidopsis thaliana GN=GLR3.3 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.295e-39 Identity = 94/194 (48.45%), Postives = 110/194 (56.70%), Query Frame = 1 Query: 46 ELSIPKSRLVALGSPEEYAIALENRT----VAAVVDERPYIDLFLSDHCQFSVRGQEFTKSGWGFAFPRDSPLAIDMSTAILTLSENGELQRIHDKWLRKKACXXXXXXXXXXXXXXXXFRGLFLICGIXXXXXXXXXXXXXXRQFKK------YXXXXXXXXXXXXXXXXXLQTFLSFADEKVDRTKSKLKRK 597 EL+I +SRLV LG+PE YA AL++ VAA+VDERPY++LFLS +C + + GQEFTKSGWGFAFPRDSPLAID+STAIL L+ENG+LQRIHDKWL K AC F GLFLICG+ RQ K LQ FLS DEK + KRK Sbjct: 710 ELNISESRLVPLGTPEAYAKALKDGPSKGGVAAIVDERPYVELFLSSNCAYRIVGQEFTKSGWGFAFPRDSPLAIDLSTAILELAENGDLQRIHDKWLMKNACTLENAELESDRLHLKSFWGLFLICGVACLLALFLYFVQIIRQLYKKPTDDAIARDQQQNHDSSSMRSTRLQRFLSLMDEKEESKHESKKRK 903
BLAST of CX295454 vs. ExPASy Swiss-Prot
Match: GLR36_ARATH (Glutamate receptor 3.6 OS=Arabidopsis thaliana GN=GLR3.6 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.922e-39 Identity = 95/219 (43.38%), Postives = 124/219 (56.62%), Query Frame = 1 Query: 25 IRHEVIEELSIPKSRLVALGSPEEYAIALENRT----VAAVVDERPYIDLFLSDHCQFSVRGQEFTKSGWGFAFPRDSPLAIDMSTAILTLSENGELQRIHDKWLRKKACXXXXXXXXXXXXXXXXFRGLFLICGIXXXXXXXXXXXXXXRQF-KKYXXXXXXXXXXXXXXXXXLQTFLSFADEKVDRTKSKLKRKREDMPSNVYMIEAEPKNGSARIN 666 +R +I EL+I SRLV L SPEEY AL + VAAVVDER YI+LFLS+ C+F + GQEFTK+GWGFAFPR+SPLA+D+S AIL LSENG++QRI DKWL +KAC F GLF++CG+ RQF ++ + +FLSF EK + K++ R+R+ +E NGS+R N Sbjct: 693 VRDYLIHELNIHVSRLVPLRSPEEYDKALRDGPGKGGVAAVVDERAYIELFLSNRCEFGIVGQEFTKNGWGFAFPRNSPLAVDVSAAILQLSENGDMQRIRDKWLLRKACSLQGAEIEVDRLELKSFWGLFVVCGVACVLALAVYTVLMIRQFGQQCPEEAEGSIRRRSSPSARIHSFLSFVKEKEEDAKARSSRERQ--------LEDISANGSSRCN 903
BLAST of CX295454 vs. ExPASy Swiss-Prot
Match: GLR31_ORYSJ (Glutamate receptor 3.1 OS=Oryza sativa subsp. japonica GN=GLR3.1 PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.534e-32 Identity = 86/200 (43.00%), Postives = 105/200 (52.50%), Query Frame = 1 Query: 43 EELSIPKSRLVALGSPEEYAIALE----NRTVAAVVDERPYIDLFLSDHCQFSVRGQEFTKSGWGFAFPRDSPLAIDMSTAILTLSENGELQRIHDKWL---RKKACXXXXXXXXXXXXXXXXFRGLFLICGIXXXXXXXXXXXXXXRQFKKY--------XXXXXXXXXXXXXXXXXLQTFLSFADEKVDRTKSKLKRK 597 +EL + SRL ALGSPEEY AL+ VAA+VDERPYI+LFL + +F+V G EFTKSGWGFAFPRDSPL++D+STAIL LSENG+LQRIHDKWL F LFLICG+ Q+ ++ LQ+FLSFAD + + K K Sbjct: 711 QELGVAHSRLKALGSPEEYKKALDLGPSKGGVAAIVDERPYIELFLYQNPKFAVVGSEFTKSGWGFAFPRDSPLSVDLSTAILELSENGDLQRIHDKWLASDMSSMSQASELDQDPDRLDVYSFSALFLICGLACIFALAIHACNLFYQYSRHAAEEDPAALQPSASDGSRSLSRRSKLQSFLSFADRREADIRRAAKEK 910
BLAST of CX295454 vs. ExPASy Swiss-Prot
Match: GLR34_ARATH (Glutamate receptor 3.4 OS=Arabidopsis thaliana GN=GLR3.4 PE=2 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.343e-28 Identity = 71/137 (51.82%), Postives = 89/137 (64.96%), Query Frame = 1 Query: 28 RHEVIEELSIPKSRLVALGSPEEYAIALENRT----VAAVVDERPYIDLFLSD-HCQFSVRGQEFTKSGWGFAFPRDSPLAIDMSTAILTLSENGELQRIHDKWLR-KKACXXXXXXXXXXXXXXXXFRGLFLICGI 420 R+ +I EL+I SR+V L E+Y AL+ VAA+VDE PYI++ L++ +C+F GQEFT++GWGFAF RDSPLA+DMSTAIL LSE GEL++IH KWL K C F GLFLICGI Sbjct: 731 RNYLINELNILPSRIVPLKDEEQYLSALQRGPNAGGVAAIVDELPYIEVLLTNSNCKFRTVGQEFTRTGWGFAFQRDSPLAVDMSTAILQLSEEGELEKIHRKWLNYKHECSMQISNSEDSQLSLKSFWGLFLICGI 867
BLAST of CX295454 vs. ExPASy Swiss-Prot
Match: GLR35_ARATH (Glutamate receptor 3.5 OS=Arabidopsis thaliana GN=GLR3.5 PE=2 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 1.064e-25 Identity = 65/134 (48.51%), Postives = 83/134 (61.94%), Query Frame = 1 Query: 37 VIEELSIPKSRLVALGSPEEYAIALENRT----VAAVVDERPYIDLFLSD-HCQFSVRGQEFTKSGWGFAFPRDSPLAIDMSTAILTLSENGELQRIHDKWLR-KKACXXXXXXXXXXXXXXXXFRGLFLICGI 420 ++ EL+I SR++ L EEY AL+ VAA+VDE PYI LS+ +C+F GQEFT++GWGFAF RDSPLA+DMSTAIL L+E G+L++I KWL C F GLFLICG+ Sbjct: 727 LVNELNIAPSRIIPLKDEEEYLSALQRGPRGGGVAAIVDELPYIKALLSNSNCKFRTVGQEFTRTGWGFAFQRDSPLAVDMSTAILQLAEEGKLEKIRKKWLTYDHECTMQISDTENYQISVQSFWGLFLICGV 860
BLAST of CX295454 vs. ExPASy Swiss-Prot
Match: GLR37_ARATH (Glutamate receptor 3.7 OS=Arabidopsis thaliana GN=GLR3.7 PE=2 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 2.008e-24 Identity = 80/219 (36.53%), Postives = 105/219 (47.95%), Query Frame = 1 Query: 49 LSIPKSRLVALGSPEEYAIALENRT-----VAAVVDERPYIDLFLSDHCQFSVRGQEFTKSGWGFAFPRDSPLAIDMSTAILTLSENGELQRIHDKWLRKKAC-XXXXXXXXXXXXXXXXFRGLFLICGIXXXXXXXXXXXXXXRQFKKY--------XXXXXXXXXXXXXXXXXLQTFLSFADEKVDRTKSKLKRKRE--DMPSNVYMIEAE---PKN 648 L + +SRLV L S EEY AL+ VAA+VDE PYI+LFL++ F + G+ F GWGFAF RDSPLAIDMSTAIL LSE +LQ I KWL K C F+GL+L+C RQF +Y + F+ F DEK + K +R + + PS+V ++A+ P+N Sbjct: 703 LGMARSRLVPLDSTEEYEKALKLGPTNWGGVAAIVDELPYIELFLAERTGFKIVGEPFMHRGWGFAFKRDSPLAIDMSTAILKLSETRKLQEIRKKWLCKTNCAGKSNWNPEPNQLHLKSFKGLYLVCIAITVSAFLVFVLRMIRQFVRYRRMERTSSMPRASWSASPTLRLRELVFDFVEFVDEKEEAIKRMFRRSDDSNNNPSHVGEVQADTEVPRN 921
BLAST of CX295454 vs. ExPASy Swiss-Prot
Match: GLR28_ARATH (Glutamate receptor 2.8 OS=Arabidopsis thaliana GN=GLR2.8 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.460e-14 Identity = 45/121 (37.19%), Postives = 67/121 (55.37%), Query Frame = 1 Query: 64 SRLVALGSPEEYAIALENRTVAAVVDERPYIDLFLSDHC-QFSVRGQEFTKSGWGFAFPRDSPLAIDMSTAILTLSENGELQRIHDKW-LRKKACXXXXXXXXXXXXXXXXFRGLFLICGI 420 S+L GS EE L N +++A DE Y+ LS +C ++++ F +G+GFAFPR+SPL D+S AIL +++ E+Q I +KW +++ C F GLFLI GI Sbjct: 706 SKLKPFGSSEECHALLSNGSISAAFDEVAYLRAILSQYCSKYAIVEPTFKTAGFGFAFPRNSPLTGDVSKAILNVTQGDEMQHIENKWFMKQNDCPDPKTALSSNRLSLRSFWGLFLIAGI 826
BLAST of CX295454 vs. ExPASy Swiss-Prot
Match: GLR27_ARATH (Glutamate receptor 2.7 OS=Arabidopsis thaliana GN=GLR2.7 PE=2 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 5.129e-12 Identity = 44/131 (33.59%), Postives = 66/131 (50.38%), Query Frame = 1 Query: 34 EVIEELSIPKSRLVALGSPEEYAIALENRTVAAVVDERPYIDLFLSDHC-QFSVRGQEFTKSGWGFAFPRDSPLAIDMSTAILTLSENGELQRIHDKWLRK-KACXXXXXXXXXXXXXXXXFRGLFLICGI 420 E+++ +S+L GS E N T+ A DE YI + LS + ++++ F +G+GF FP+ SPL D+S AIL +++ E+Q I +KW +K C F GLFLI GI Sbjct: 701 ELLKSQGFDESQLKPFGSAVECDELFSNGTITASFDEVAYIKVILSQNSSKYTMVEPSFKTAGFGFVFPKKSPLTDDVSRAILNVTQGEEMQHIENKWFKKPNNCPDLNTSLSSNHLSLSSFWGLFLIAGI 831 The following BLAST results are available for this feature:
BLAST of CX295454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295454 ID=CX295454; Name=CX295454; organism=Citrus clementina; type=EST; length=757bpback to top |