CX295621
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295621 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.956e-33 Identity = 84/201 (41.79%), Postives = 114/201 (56.72%), Query Frame = 2 Query: 71 LVDKSLITVS-YNGLQMHDLLQEMGRQIVRQESEKEPGKRSRLWDPKEIRRVLKHNKGTDAIEGIFLNLSKIKGINLDPGAFTNMSNLRLLKFYVPKFYEIEKLLSMSIEEQLSYSKVQLPKGLDCLPKILRYLHWDTYPLRTLPSNFKAKNLVELNLRFSKVEQLWEGEKACVPSSIQNFKYLSALSFEGCKSLRSFPAI 670 LVDKSL+T+S +N + M +Q GR+IVRQES PG RSRLW+ IR V ++ GT AIEGIFL++ +K + +P F M NLRLLK Y K E V P+GL+ LP LR LHW+ YPL +LP +F +NLVELNL S ++LW+G+KA ++ + + L + L P + Sbjct: 1092 LVDKSLLTISQHNLVDMLSFIQATGREIVRQESADRPGDRSRLWNADYIRHVFINDTGTSAIEGIFLDMLNLK-FDANPNVFEKMCNLRLLKLYCSKAEEKHG--------------VSFPQGLEYLPSKLRLLHWEYYPLSSLPKSFNPENLVELNLPSSCAKKLWKGKKARFCTTNSSLEKLKKMRLSYSDQLTKIPRL 1277
BLAST of CX295621 vs. ExPASy Swiss-Prot
Match: WRK52_ARATH (Probable WRKY transcription factor 52 OS=Arabidopsis thaliana GN=WRKY52 PE=2 SV=3) HSP 1 Score: 129.413 bits (324), Expect = 1.983e-29 Identity = 80/235 (34.04%), Postives = 128/235 (54.47%), Query Frame = 2 Query: 62 LDVLVDKSLITVSYNGLQMHDLLQEMGRQIVRQESEKEPGKRSRLWDPKEIRRVLKHNK---------------GTDAIEGIFLNLSKIKGINLDPGAFTNMSNLRLLKFYV--PKFYEIEKLLSMSIEEQLSYSKVQLPKG-LDCLPKILRYLHWDTYPLRTLPSNFKAKNLVELNLRFSKVEQLWEGEK---------ACVPSSIQNF------KYLSALSFEGCKSLRSFPA 667 +DVLVDK L+T+S N + +H L Q++GR+I+ E+ + +R RLW+P I+ +L++N+ G++ IEG+FL+ S ++ +L P AF NM NLRLLK Y P+ + + + P G L LP LR LHW+ YPL++LP NF ++LVE+N+ +S++++LW G K C + + + L + +GC L++FPA Sbjct: 424 IDVLVDKCLVTISENRVWLHKLTQDIGREIINGETVQIE-RRRRLWEPWSIKYLLEYNEHKANGEPKTTFKRAQGSEEIEGLFLDTSNLR-FDLQPSAFKNMLNLRLLKIYCSNPEVHPV----------------INFPTGSLHSLPNELRLLHWENYPLKSLPQNFDPRHLVEINMPYSQLQKLWGGTKNLEMLRTIRLCHSHHLVDIDDLLKAENLEVIDLQGCTRLQNFPA 640
BLAST of CX295621 vs. ExPASy Swiss-Prot
Match: WRK16_ARATH (Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.534e-29 Identity = 83/251 (33.07%), Postives = 133/251 (52.99%), Query Frame = 2 Query: 20 DIVTRILDDSGSHR---LDVLVDKSLITVSYNGLQMHDLLQEMGRQIVRQESEKEPGKRSRLWDPKEIRRVLKHNKGTD---------------AIEGIFLNLSKIKGINLDPGAFTNMSNLRLLKFYV--PKFYEIEKLLSMSIEEQLSYSKVQLPKGLDCLPKILRYLHWDTYPLRTLPSNFKAKNLVELNLRFSKVEQLWEGEK---------ACVPSSIQNF------KYLSALSFEGCKSLRSFPA 667 D V ++L+ G +DVLV+KSL+T+S N ++MH+L+Q++GRQI+ +E+ ++ +RSRLW+P I+ +L+ + + IEG+FL+ S + ++ AF NM NLRL K Y P+ + + L S L LP +LR LHW+ YPL+ LP NF +LVE+N+ +S++++LW G K C + + + L + +GC L+SFPA Sbjct: 400 DYVMQLLEGCGFFPHVGIDVLVEKSLVTISENRVRMHNLIQDVGRQIINRET-RQTKRRSRLWEPCSIKYLLEDKEQNENEEQKTTFERAQVPEEIEGMFLDTSNLS-FDIKHVAFDNMLNLRLFKIYSSNPEVHHVNNFLKGS---------------LSSLPNVLRLLHWENYPLQFLPQNFDPIHLVEINMPYSQLKKLWGGTKDLEMLKTIRLCHSQQLVDIDDLLKAQNLEVVDLQGCTRLQSFPA 633
BLAST of CX295621 vs. ExPASy Swiss-Prot
Match: Y4117_ARATH (Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana GN=At4g11170 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.192e-28 Identity = 81/207 (39.13%), Postives = 120/207 (57.97%), Query Frame = 2 Query: 53 SHRLDVLVDKSLITVSYNG-LQMHDLLQEMGRQIVRQESEKEPGKRSRLWDPKEIRRVLKHNKGTDAIEGIFLNLSKIK-GINLDPGAFTNMSNLRLLKFYVPKFYEIEKLLSMSIEEQLSYSKVQLP-KGLDCLPKILRYLHWDTYPLRTLPSNFKAKNLVELNLRFSKVEQLWEGEKACVPSSIQNFKYLSALSFEGCKSLRSFP 664 S L VL DKSLI NG ++MH LL+++G+++VR++S EPGKR L + KE VL +N GT + GI L++ +IK + + F M NL LKFY +S I++++ K+QLP +GL LP+ LR LHWD YPL PS+F+ + LVELN+ SK+++LW G +Q + L ++ ++L P Sbjct: 462 SFGLQVLADKSLIQKFENGRIEMHSLLRQLGKEVVRKQSIYEPGKRQFLMNAKETCGVLSNNTGTGTVLGISLDMCEIKEELYISEKTFEEMRNLVYLKFY----------MSSPIDDKMKV-KLQLPEEGLSYLPQ-LRLLHWDAYPLEFFPSSFRPECLVELNMSHSKLKKLWSG--------VQPLRNLRTMNLNSSRNLEILP 648
BLAST of CX295621 vs. ExPASy Swiss-Prot
Match: TMVRN_NICGU (TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.429e-19 Identity = 64/191 (33.51%), Postives = 95/191 (49.74%), Query Frame = 2 Query: 20 DIVTRILDD---SGSHRLDVLVDKSLITVS-YNGLQMHDLLQEMGRQIVRQESEKEPGKRSRLWDPKEIRRVLKHNKGTDAIEGIFLNLSKIKGINLDPGAFTNMSNLRLLKFYVPKFYEIEKLLSMSIEEQLSYSKVQLPKGLDCLPKILRYLHWDTYPLRTLPSNFKAKNLVELNLRFSKVEQLWEGEK 580 D + +IL+ + L +L+DKSL+ +S YN +QMHDL+Q+MG+ IV +K+PG+RSRLW KE+ V+ +N GT A+E I+++ S + A NM LR+ + + +D LP LR YP + PS F+ K LV L LR + + LW K Sbjct: 451 DYILQILESCHIGAEYGLRILIDKSLVFISEYNQVQMHDLIQDMGKYIVN--FQKDPGERSRLWLAKEVEEVMSNNTGTMAMEAIWVS-SYSSTLRFSNQAVKNMKRLRV----------------------FNMGRSSTHYAIDYLPNNLRCFVCTNYPWESFPSTFELKMLVHLQLRHNSLRHLWTETK 616 The following BLAST results are available for this feature:
BLAST of CX295621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295621 ID=CX295621; Name=CX295621; organism=Citrus clementina; type=EST; length=739bpback to top |