CX295644
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295644 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1) HSP 1 Score: 375.941 bits (964), Expect = 1.064e-103 Identity = 165/226 (73.01%), Postives = 185/226 (81.86%), Query Frame = 3 Query: 9 TLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPV 686 TLRP+AIELT PP KPQWKQVF P + +T CWLW LAK H ++HDAGYHQL+SHWLRTH CTEPY+IA NRQLS MHPIYRLL PHFRYTMEIN ARQ+LVN GIIE+ F PGKY++E SS Y K WRFD E LP DLI RGLA ED +A HG++LTI DYPFANDGL LWDAIK+WVTDYV HYYPD+ L+ SDEELQ WW+E+R +GHGDKK EPWWPV Sbjct: 499 TLRPVAIELTCPPNINKPQWKQVFTPGYDATSCWLWNLAKTHAISHDAGYHQLISHWLRTHACTEPYIIAANRQLSAMHPIYRLLHPHFRYTMEINARARQSLVNGGGIIETCFWPGKYALELSSAVYGKLWRFDQEGLPADLIKRGLAEEDKTAEHGVRLTIPDYPFANDGLILWDAIKEWVTDYVKHYYPDEELITSDEELQGWWSEVRNIGHGDKKDEPWWPV 724
BLAST of CX295644 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1) HSP 1 Score: 349.747 bits (896), Expect = 8.165e-96 Identity = 159/226 (70.35%), Postives = 182/226 (80.53%), Query Frame = 3 Query: 6 GTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWP 683 GTLR +AIELTRP +PQW+QVF PS +T+ WLW++AKAHV AHDAG+H+L++HWLRTHC EPY+IA NRQLS MHPIY+LL PHFRYTM IN LAR L++A GIIE SFSP KYSME SSVAYDK WRFD EALP DL+ RG+A EDP+A HGL+L IEDYPFANDGL +WDAIK WV YV +YPD V DEELQA+WTE+RT GHGDKK PWWP Sbjct: 542 GTLRLLAIELTRPASPSQPQWRQVFTPSTDTTKSWLWRMAKAHVRAHDAGHHELITHWLRTHCAVEPYIIAANRQLSEMHPIYQLLHPHFRYTMRINALARSRLISAAGIIELSFSPQKYSMELSSVAYDKLWRFDMEALPADLVRRGMAEEDPTAEHGLRLAIEDYPFANDGLLIWDAIKTWVQAYVARFYPDADSVAGDEELQAFWTEVRTKGHGDKKDAPWWP 767
BLAST of CX295644 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2) HSP 1 Score: 348.206 bits (892), Expect = 2.376e-95 Identity = 159/226 (70.35%), Postives = 181/226 (80.09%), Query Frame = 3 Query: 6 GTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWP 683 GTL+ +AIELTRP +PQW+QVF PS +T WLW++AKAHV AHDAG+H+L++HWLRTHC EPY+IA NRQLS MHPIY+LL PHFRYTM IN AR AL++A GIIE SFSP KYSME SSVAYDK WRFD EALP DL+ RG+A EDP+A HGLKL IEDYPFANDGL +WDAIK WV YV +YPD V DEELQA+WTE+RT GHGDKK PWWP Sbjct: 525 GTLQLLAIELTRPASPSQPQWRQVFTPSTDATMSWLWRMAKAHVRAHDAGHHELITHWLRTHCAVEPYIIAANRQLSEMHPIYQLLRPHFRYTMRINARARSALISAGGIIERSFSPQKYSMELSSVAYDKLWRFDTEALPADLVRRGMAEEDPTAEHGLKLAIEDYPFANDGLLIWDAIKTWVQAYVARFYPDADSVAGDEELQAFWTEVRTKGHGDKKDAPWWP 750
BLAST of CX295644 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1) HSP 1 Score: 344.739 bits (883), Expect = 2.627e-94 Identity = 160/228 (70.18%), Postives = 181/228 (79.39%), Query Frame = 3 Query: 6 GTLRPIAIELTRPPMNGKPQWKQVFLPSWHS--TECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWP 683 GTLRPIAIELTRP KPQW+QVF P T WLW+LAKAH+LAHDAG HQLVSHWLRTH CTEPY+IA NRQLS MHP+YRLL PHFR+TMEIN AR L+NA GIIE SF PG+YS+E SSVAYD+QWRFD EALP+DLI RG+AV +P+ L+L IEDYP+ANDGL +WDAIKQW YV HYYP + + DEELQAWWTE+RT GH DK+ EPWWP Sbjct: 529 GTLRPIAIELTRPKSKKKPQWRQVFTPGCDGSVTGSWLWQLAKAHILAHDAGVHQLVSHWLRTHACTEPYIIAANRQLSQMHPVYRLLHPHFRFTMEINAQARAMLINAGGIIEGSFVPGEYSLELSSVAYDQQWRFDMEALPEDLIRRGMAVRNPNGE--LELAIEDYPYANDGLLVWDAIKQWALTYVQHYYPCAADIVDDEELQAWWTEVRTKGHADKQDEPWWP 754
BLAST of CX295644 vs. ExPASy Swiss-Prot
Match: LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1) HSP 1 Score: 331.643 bits (849), Expect = 2.301e-90 Identity = 158/230 (68.70%), Postives = 176/230 (76.52%), Query Frame = 3 Query: 6 GTLRPIAIELTRPPMNGKPQWKQVFLP----SWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWP 683 GTLRPIAIELTRP K QW++VF P S T W W+LAK HVL+HD GYHQLVSHWLRTHCC EPYVIA NRQLS MHPIYRLL PHFR+TMEIN AR L+ ADGIIE +FSPG++SME SS AYDKQWRFD EALP+DLI RG+AV L+L IEDYP+ANDGL +WDAIKQW +DYV HYYP + DEELQ WWTE+RT GH DK+ EPWWP Sbjct: 528 GTLRPIAIELTRPKSPHKQQWRKVFTPGSGYSGSVTGSWEWQLAKIHVLSHDTGYHQLVSHWLRTHCCVEPYVIAANRQLSQMHPIYRLLHPHFRFTMEINAQARGMLICADGIIEKTFSPGEFSMEISSAAYDKQWRFDMEALPEDLIRRGMAVRGEDGK--LELAIEDYPYANDGLLVWDAIKQWASDYVAHYYPCAVDIVDDEELQDWWTEVRTKGHPDKQDEPWWP 755
BLAST of CX295644 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1) HSP 1 Score: 330.102 bits (845), Expect = 6.695e-90 Identity = 153/227 (67.40%), Postives = 176/227 (77.53%), Query Frame = 3 Query: 6 GTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPV 686 GTL P+AIELTRP KPQWK+ F +TE WLWKLAKAHVL HD GYHQLVSHWLRTH C EPY+IATNRQLS MHP+YRLL PHFRYTMEIN LAR+AL+NADGIIE +F GKYS+E SSVAY W+F+ EALP+DLI+RGLAV L+L I+DYP+A+DGL +W +IKQW +DYV+ YY V DEEL+AWW E+RT GH DKK EPWWPV Sbjct: 500 GTLMPLAIELTRPQSPTKPQWKRAFTHGSDATESWLWKLAKAHVLTHDTGYHQLVSHWLRTHACVEPYIIATNRQLSRMHPVYRLLHPHFRYTMEINALAREALINADGIIEEAFLAGKYSIELSSVAYGAAWQFNTEALPEDLINRGLAVRRDDGE--LELAIKDYPYADDGLLIWGSIKQWASDYVDFYYKSDGDVAGDEELRAWWEEVRTKGHADKKDEPWWPV 724
BLAST of CX295644 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 4.350e-81 Identity = 132/226 (58.41%), Postives = 170/226 (75.22%), Query Frame = 3 Query: 6 GTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWP 683 GTL+P+AIEL+ PP K + K+V P +T W+W+LAKAHV ++DAG HQLV+HWLRTH C EP+++A +RQLS MHPI++LLDPH RYT+EIN LARQ+L++ADG+IE F+ G Y ME S+ AY WRFD E LP DLI RG+A+ D + PHGLKL IEDYP+ANDGL LW AI+ WV YV YYP+ +L+++D ELQ+W++E VGH D + WWP Sbjct: 522 GTLKPVAIELSLPPHGPKHRSKRVLTPPVDATSNWMWQLAKAHVSSNDAGVHQLVNHWLRTHACLEPFILAAHRQLSAMHPIFKLLDPHMRYTLEINALARQSLISADGVIEGGFTAGAYGMEMSAAAYKSSWRFDMEGLPADLIRRGMAIPDATQPHGLKLLIEDYPYANDGLLLWSAIQTWVRTYVERYYPNPNLIKTDSELQSWYSESINVGHADLRDADWWP 747
BLAST of CX295644 vs. ExPASy Swiss-Prot
Match: LOXX_SOYBN (Seed lipoxygenase OS=Glycine max GN=LOX1.4 PE=1 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 5.681e-81 Identity = 140/228 (61.40%), Postives = 172/228 (75.44%), Query Frame = 3 Query: 6 GTLRPIAIELTRPPMNGKPQWKQ--VFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWP 683 GTL+P+AIEL++P +G + V LP+ + +W LAKAHV+ +D+GYHQLVSHWL TH EP+ IATNR LSV+HPIY+LL PH+R T+ INGLARQ+L+NADGIIE SF PGKYS+E SS Y K W F +ALP DL+ RGLA+EDPSAPHGL+L IEDYP+A DGL++WDAIK WV +YV+ YYP + V+ D ELQAWW E GHGD K +PWWP Sbjct: 467 GTLKPLAIELSKPHPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSHWLNTHAVMEPFAIATNRHLSVLHPIYKLLYPHYRDTININGLARQSLINADGIIEKSFLPGKYSIEMSSSVY-KNWVFTDQALPADLVKRGLAIEDPSAPHGLRLVIEDYPYAVDGLEIWDAIKTWVHEYVSLYYPTDAAVQQDTELQAWWKEAVEKGHGDLKEKPWWP 693
BLAST of CX295644 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2) HSP 1 Score: 297.745 bits (761), Expect = 3.682e-80 Identity = 136/228 (59.65%), Postives = 168/228 (73.68%), Query Frame = 3 Query: 3 AGTLRPIAIELTRPPMN-GKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWP 683 AGTL+PIAIEL+ PP G+P+ +V P + +T WLW LAKAHV ++DAG HQLV+HWLRTH EP+++A +R +S MHPI++LL PH RYT+EIN LARQ+L+NADG+IES F+PG S E S+ Y WRFD E LP DLI RG+AVED + PHG++L IEDYP+ANDGL LW AI+ WV YV YYPD V+ D ELQ W+ E VGHGD +H PWWP Sbjct: 515 AGTLKPIAIELSLPPAKPGEPRPSKVLTPPYDATSNWLWMLAKAHVSSNDAGVHQLVNHWLRTHATMEPFILAAHRHMSAMHPIFKLLHPHMRYTLEINALARQSLINADGVIESCFTPGPVSGEISAAYYRNHWRFDLEGLPSDLIRRGVAVEDATQPHGVRLLIEDYPYANDGLLLWSAIRSWVESYVQLYYPDAGTVQCDLELQGWYHESIHVGHGDLRHAPWWP 742
BLAST of CX295644 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2) HSP 1 Score: 297.36 bits (760), Expect = 4.809e-80 Identity = 136/228 (59.65%), Postives = 168/228 (73.68%), Query Frame = 3 Query: 3 AGTLRPIAIELTRPPM-NGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWP 683 AGTL+PIAIEL PPM +G + K+VF P +T WLW+LAKAHV ++DAG HQL++HWLRTH C EP++IA +RQ+S MHPI++LL PH RYT++IN LARQ L+N DG+IES F+PG ME S+ AY + WR D E LP DLI RG+AVEDPS PHGL+L IEDYP+A DGL LW AI +W YV YYP V++D ELQ+W+ E GH DK+ PWWP Sbjct: 501 AGTLKPIAIELCLPPMTDGCKRAKRVFTPPADATSNWLWQLAKAHVCSNDAGVHQLINHWLRTHACMEPFIIAAHRQMSAMHPIFKLLKPHMRYTLKINALARQILINGDGVIESGFTPGNVCMEMSAFAYRELWRLDQEGLPADLIRRGMAVEDPSQPHGLRLLIEDYPYAADGLLLWSAISRWCEAYVAAYYPSDEAVQADYELQSWYAEAVQSGHADKRGAPWWP 728 The following BLAST results are available for this feature:
BLAST of CX295644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295644 ID=CX295644; Name=CX295644; organism=Citrus clementina; type=EST; length=686bpback to top |