CX295778
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295778 vs. ExPASy Swiss-Prot
Match: NDUF3_XENTR (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Xenopus tropicalis GN=ndufaf3 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.883e-15 Identity = 39/107 (36.45%), Postives = 62/107 (57.94%), Query Frame = 1 Query: 361 YTDTGFTVNGVQYEGSLLCIGNLLLSWTPKKFSEITPNCLSIFQLVRPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNAASTYNILNEEGRIVAAALLP 681 Y+ GF +NG + G I +L W + +I LS+F ++ P EIL++G G +E ++P + +F+R G+ +E D+ NA +T+N L E RI AAAL+P Sbjct: 68 YSSQGFIINGDKVVGPCAVIPKAILQWNVGSYKDINLESLSLFHMLSPRIEILVVGTGDRVERLDPNILKFMRQKGVAVEVQDTANACATFNFLVSERRITAAALIP 174
BLAST of CX295778 vs. ExPASy Swiss-Prot
Match: NDUF3_RAT (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Rattus norvegicus GN=Ndufaf3 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.366e-14 Identity = 39/124 (31.45%), Postives = 66/124 (53.23%), Query Frame = 1 Query: 310 QINLIDNVPEDQLRFQGYTDTGFTVNGVQYEGSLLCIGNLLLSWTPKKFSEITPNCLSIFQLVRPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNAASTYNILNEEGRIVAAALLP 681 +I+L+ N + Y GFT+NG + G + ++ W +IT SIF ++ P EI+++G G E ++ ++ Q +R G+ +E D+ NA +T+N L EGR+ AAL+P Sbjct: 47 RISLLQNEFPQAVYIDSYNSRGFTINGNRVFGPCALLPQTVVQWNVGSHQDITEESFSIFWMLEPRIEIVVVGTGNKTERLHSQVLQAMRQRGIAVEIQDTPNACATFNFLCHEGRVTGAALIP 170
BLAST of CX295778 vs. ExPASy Swiss-Prot
Match: NDUF3_MOUSE (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Mus musculus GN=Ndufaf3 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.434e-13 Identity = 37/124 (29.84%), Postives = 68/124 (54.84%), Query Frame = 1 Query: 310 QINLIDNVPEDQLRFQGYTDTGFTVNGVQYEGSLLCIGNLLLSWTPKKFSEITPNCLSIFQLVRPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNAASTYNILNEEGRIVAAALLP 681 +I+L+ + + Y+ GFT+ G + G + + ++ W +IT S+F ++ P EI+++G G E ++P++ Q +R G+ +E D+ NA +T+N L EGR+ AAL+P Sbjct: 47 RISLLQSEFPQAVYIDSYSSRGFTICGNRVFGPCVLLPQTVVQWNVGSHQDITEESFSLFWMLEPRIEIVVVGTGNKTERLHPQVLQAMRQRGIAVEVQDTPNACATFNFLCHEGRVTGAALIP 170
BLAST of CX295778 vs. ExPASy Swiss-Prot
Match: NDUF3_BOVIN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Bos taurus GN=NDUFAF3 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13 Identity = 37/124 (29.84%), Postives = 65/124 (52.42%), Query Frame = 1 Query: 310 QINLIDNVPEDQLRFQGYTDTGFTVNGVQYEGSLLCIGNLLLSWTPKKFSEITPNCLSIFQLVRPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNAASTYNILNEEGRIVAAALLP 681 +I+L+ + Y+ GF VNG + G + ++ W + +IT S+F ++ P EI+++G G E + P + + +R G+ +E D+ NA +T+N L EGR+ AAL+P Sbjct: 46 RISLLQRESPLAMYIDSYSSRGFVVNGNRVFGPCALLPQSVVQWNVGSYQDITEESFSLFWMLEPRIEIVVVGTGDRTERLQPHVLRAMRQRGIAVEVQDTPNACATFNFLCHEGRVTGAALIP 169
BLAST of CX295778 vs. ExPASy Swiss-Prot
Match: NDUF3_HUMAN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Homo sapiens GN=NDUFAF3 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.250e-13 Identity = 37/124 (29.84%), Postives = 65/124 (52.42%), Query Frame = 1 Query: 310 QINLIDNVPEDQLRFQGYTDTGFTVNGVQYEGSLLCIGNLLLSWTPKKFSEITPNCLSIFQLVRPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNAASTYNILNEEGRIVAAALLP 681 +I+L+ + Y GF +NG + G + + ++ W +IT + S+F L+ P EI+++G G E + ++ Q +R G+ +E D+ NA +T+N L EGR+ AAL+P Sbjct: 46 RISLLQREAAQAMYIDSYNSRGFMINGNRVLGPCALLPHSVVQWNVGSHQDITEDSFSLFWLLEPRIEIVVVGTGDRTERLQSQVLQAMRQRGIAVEVQDTPNACATFNFLCHEGRVTGAALIP 169
BLAST of CX295778 vs. ExPASy Swiss-Prot
Match: NDUF3_DANRE (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Danio rerio GN=ndufaf3 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.250e-13 Identity = 37/107 (34.58%), Postives = 61/107 (57.01%), Query Frame = 1 Query: 361 YTDTGFTVNGVQYEGSLLCIGNLLLSWTPKKFSEITPNCLSIFQLVRPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNAASTYNILNEEGRIVAAALLP 681 Y+ GF +NG G + +L W S+I+ LS+F L+ P E+L+LG G E ++ E+ + ++ G+ +E D+ NA +T+N L+ E R+ AAAL+P Sbjct: 62 YSPRGFNINGNTVFGPCAVLPPAILQWNVGSHSDISVESLSLFYLLEPQIEVLVLGTGARTERLHAEVLEELKKRGIAVEVQDTPNACATFNFLSSEKRLAAAALIP 168 The following BLAST results are available for this feature:
BLAST of CX295778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295778 ID=CX295778; Name=CX295778; organism=Citrus clementina; type=EST; length=710bpback to top |