CX295788
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295788 vs. ExPASy Swiss-Prot
Match: SR43C_ARATH (Signal recognition particle 43 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=CAO PE=1 SV=2) HSP 1 Score: 192.2 bits (487), Expect = 2.255e-48 Identity = 110/214 (51.40%), Postives = 135/214 (63.08%), Query Frame = 2 Query: 83 SLLLNQSLARLKLLPKIPPPTSQFLHIKPPQPHGKLHSTASFAI------XXXXXXXXXXXXXXDDE---SYGEVSKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDCIAKDVVAEYESPWWTXXXXXXXXXLKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGADLNHRDNSGGLTALHMAAGYVKPGCGELLLELGADAD 697 +L+++QSL+R+KL P +S P ++ AI DDE SYGEV+KIIGSR + MEYLIEWKDGH+PSWVP IA DVV+EYE+PWWT L +++E RDVDAVD +GRTALLFV+GLGS+ CVR+LAEAGADL+HRD GGLTALHMAAGYV+P E L+ELGAD + Sbjct: 12 ALVIHQSLSRIKLSPPKSSSSSSSAFSPESLPIRRIELCFRGAICAAVQRNYEETTSSVEEAEEDDESSSSYGEVNKIIGSRTAGEG-AMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE---DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIE 221
BLAST of CX295788 vs. ExPASy Swiss-Prot
Match: SR43C_ORYSJ (Probable signal recognition particle 43 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0131900 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.586e-36 Identity = 78/160 (48.75%), Postives = 101/160 (63.12%), Query Frame = 2 Query: 257 DDESYGEVSKIIGSRALED-----------ATGMEYLIEWKDGHAPSWVPQDCIAKDVVAEYESPWWTXXXXXXXXXLKEII-EAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGADLNHRDNS-GGLTALHMAAGYVKPGCGELLLELGADAD 697 DDE+YGEV +I+ SR +++ T EYL+EWKDGH PSW+P + IA DVVAEYE+PWWT + ++ + RD DA D GRTA+ F +GLGSE CVR LAEAGAD+ + + GGLT LH+A GY +P LLELGA+ + Sbjct: 63 DDEAYGEVDRIVSSRTIKNPVFAEDGSATTVTATEYLVEWKDGHEPSWIPAEAIAADVVAEYETPWWTAAKKADAAEITALLADETLRRDPDAEDAQGRTAMHFAAGLGSEECVRALAEAGADVGRPERAGGGLTPLHIAVGYGRPAAVRALLELGAEPE 222 The following BLAST results are available for this feature:
BLAST of CX295788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295788 ID=CX295788; Name=CX295788; organism=Citrus clementina; type=EST; length=699bpback to top |