CX295840
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295840 vs. ExPASy Swiss-Prot
Match: FLA2_ARATH (Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana GN=FLA2 PE=1 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.019e-49 Identity = 95/161 (59.01%), Postives = 121/161 (75.16%), Query Frame = 3 Query: 54 VLNSDEAEAPTPGPSGLNLTAIMAKQGCKAFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKYKNLTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVXXXXXXXXXXXXXXXXDEEPLVIYKINKVLLPIELFK 536 VL S EAEAPT PS L LT I+ KQGCKAF+D+L +TGA TF++ +DGGLTVFCP+D+ V FMPK+K+L+ A+K +L+LYHG PVYQSLQ L+S NG +NTLAT+G +K+DFTVQNDGE V D+EPL++YKI+KVLLP E++K Sbjct: 173 VLTSPEAEAPTASPSDLILTTILEKQGCKAFSDILKSTGADKTFQDTVDGGLTVFCPSDSAVGKFMPKFKSLSPANKTALVLYHGMPVYQSLQMLRSGNGAVNTLATEGNNKFDFTVQNDGEDVTLETDVVTAKVMGTLKDQEPLIVYKIDKVLLPREIYK 333
BLAST of CX295840 vs. ExPASy Swiss-Prot
Match: FLA1_ARATH (Fasciclin-like arabinogalactan protein 1 OS=Arabidopsis thaliana GN=FLA1 PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 9.558e-40 Identity = 84/162 (51.85%), Postives = 106/162 (65.43%), Query Frame = 3 Query: 54 VLNSDEAEAPTPGPSGLNLTAIMAKQGCKAFADLLIAT-GAHTTFEENLDGGLTVFCPTDAVVNDFMPKYKNLTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVXXXXXXXXXXXXXXXXDEEPLVIYKINKVLLPIELFK 536 VL S+ A APTP P+ +NLT IM+ GCK FA+ L+ GA T++E+L+GG+TVFCP D + F+PKYKNLT K + L + P Y S+ LKS+NG MNTLATDGA+K++ TVQNDGE V DE+PL IY +KVLLP ELFK Sbjct: 169 VLPSETAAAPTPAPAEMNLTGIMSAHGCKVFAETLLTNPGASKTYQESLEGGMTVFCPGDDAMKGFLPKYKNLTAPKKEAFLDFLAVPTYYSMAMLKSNNGPMNTLATDGANKFELTVQNDGEKVTLKTRINTVKIVDTLIDEQPLAIYATDKVLLPKELFK 330
BLAST of CX295840 vs. ExPASy Swiss-Prot
Match: FLA10_ARATH (Fasciclin-like arabinogalactan protein 10 OS=Arabidopsis thaliana GN=FLA10 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.340e-25 Identity = 64/154 (41.56%), Postives = 90/154 (58.44%), Query Frame = 3 Query: 78 APTPGPSGL-NLTAIMAKQGCKAFADLLIATGAHTTFEENLDGGLTVFCPTD-AVVNDFMPKYKNLTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVXXXXXXXXXXXXXXXXDEEPLVIYKINKVLLPIELF 533 AP P +G+ N+T ++ K GCK FA+LL+++G TFE ++ GLTVF P+D A +P NLT+A VSLL YH Y+ +LK++ ++TLAT+GA KYD T G+ V DE P+VI+ ++ VLLP ELF Sbjct: 180 APAPSSAGVSNITGLLEKAGCKTFANLLVSSGVIKTFESTVEKGLTVFAPSDEAFKARGVPDLTNLTQAEVVSLLEYHALAEYKPKGSLKTNKDAISTLATNGAGKYDLTTSTSGDEVILHTGVGPSRLADTVVDETPVVIFTVDNVLLPAELF 333
BLAST of CX295840 vs. ExPASy Swiss-Prot
Match: FLA8_ARATH (Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana GN=FLA8 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.254e-23 Identity = 60/153 (39.22%), Postives = 87/153 (56.86%), Query Frame = 3 Query: 78 APTPGPSGLNLTAIMAKQGCKAFADLLIATGAHTTFEENLDGGLTVFCPTD-AVVNDFMPKYKNLTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVXXXXXXXXXXXXXXXXDEEPLVIYKINKVLLPIELF 533 AP P S N+T ++ K GCK FA+LL+++G T+E ++ GLTVF P+D A + +P LT+A VSLL YH Y+ +LK++ ++TLAT+GA K+D T G+ V D P+VI+ ++ VLLP ELF Sbjct: 180 APAPSASLSNITGLLEKAGCKTFANLLVSSGVLKTYESAVEKGLTVFAPSDEAFKAEGVPDLTKLTQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLATNGAGKFDLTTSTSGDEVILHTGVAPSRLADTVLDATPVVIFTVDNVLLPAELF 332
BLAST of CX295840 vs. ExPASy Swiss-Prot
Match: FLA4_ARATH (Fasciclin-like arabinogalactan protein 4 OS=Arabidopsis thaliana GN=FLA4 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.898e-12 Identity = 55/159 (34.59%), Postives = 81/159 (50.94%), Query Frame = 3 Query: 84 TPGPSGLNLTAIMAK-QGCKAFADLLIATGAHTTFEENLDG-GLTVFCPTDAVVNDFMPKYKNLTEA---HKVSLLLYHGTPVYQSLQTLKS-SNGVMNTLATD--GASKYDFTVQN-DGEIVXXXXXXXXXXXXXXXXDEEPLVIYKINKVLLPIELF 533 +P P+G+NLT I+ LL+A+G T FE + G G+TVF PTD+ +D +P NL K +L +H Y +L +L+S +N V TLAT+ GA Y + +G IV D+ P+ ++ ++KVLLP ELF Sbjct: 200 SPPPAGINLTQILINGHNFNVALSLLVASGVITEFENDERGAGITVFVPTDSAFSD-LPSNVNLQSLPAEQKAFVLKFHVLHSYYTLGSLESITNPVQPTLATEEMGAGSYTLNISRVNGSIVTINSGVVLAVVTQTAFDQNPVSVFGVSKVLLPKELF 357
BLAST of CX295840 vs. ExPASy Swiss-Prot
Match: FLA11_ARATH (Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana GN=FLA11 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.101e-11 Identity = 50/168 (29.76%), Postives = 81/168 (48.21%), Query Frame = 3 Query: 54 VLNSDEAEAPTPGPSG-LNLTAIMAKQG-CKAFADLLIATGA----HTTFEENLDGGLTVFCPTDAVVNDFMPKYKN-LTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGAS-KYDFTVQNDGEIVXXXXXXXXXXXXXXXXDEEPLVIYKINKVLLPIELF 533 V+ + +AP PGPSG N+TAI+ K G F LL +T A +T + GLTVF PTD N N L++ KV L+ +H P ++ ++ + + T A DG + K+ + + G V ++ L +Y++++VLLP+ +F Sbjct: 18 VIATTYGQAPAPGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQAGDGQNGKFPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMF 185
BLAST of CX295840 vs. ExPASy Swiss-Prot
Match: FLA7_ARATH (Fasciclin-like arabinogalactan protein 7 OS=Arabidopsis thaliana GN=FLA7 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.204e-11 Identity = 48/159 (30.19%), Postives = 73/159 (45.91%), Query Frame = 3 Query: 78 APTPGPSGLNLTAIMAKQG-CKAFADLLIATGAHTTFEE---NLDGGLTVFCPTD-AVVNDFMPKYKNLTEAHKVSLLLYHGTPVYQSLQTLK--SSNGVMNTLATDGASKYDFTVQNDGEIVXXXXXXXXXXXXXXXXDEEPLVIYKINKVLLPIELF 533 AP P P +NLT +++ G F D L++TG TF+ N + G+T+F P D A P NLT+ L+L+H P Y SL K S +G ++T A +Y + V +P+ +Y++N+VLLP +F Sbjct: 37 APAPAPENVNLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNLTKDQLKQLVLFHALPHYYSLSEFKNLSQSGPVSTFA---GGQYSLKFTDVSGTVRIDSLWTRTKVSSSVFSTDPVAVYQVNRVLLPEAIF 192 The following BLAST results are available for this feature:
BLAST of CX295840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295840 ID=CX295840; Name=CX295840; organism=Citrus clementina; type=EST; length=744bpback to top |