CX296273
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296273 vs. ExPASy Swiss-Prot
Match: UBIQ_WHEAT (Ubiquitin OS=Triticum aestivum PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.231e-20 Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 3 Query: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 296 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 48 HSP 2 Score: 82.0333 bits (201), Expect = 1.021e-15 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 3 Query: 27 GTRPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152 G PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 35 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CX296273 vs. ExPASy Swiss-Prot
Match: UBIQ_SOYBN (Ubiquitin OS=Glycine max GN=SUBI-1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.231e-20 Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 3 Query: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 296 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 48 HSP 2 Score: 82.0333 bits (201), Expect = 1.021e-15 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 3 Query: 27 GTRPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152 G PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 35 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CX296273 vs. ExPASy Swiss-Prot
Match: UBIQ_SOLTU (Ubiquitin OS=Solanum tuberosum GN=UBI3 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.231e-20 Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 3 Query: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 296 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 48 HSP 2 Score: 82.0333 bits (201), Expect = 1.021e-15 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 3 Query: 27 GTRPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152 G PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 35 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CX296273 vs. ExPASy Swiss-Prot
Match: UBIQ_SOLLC (Ubiquitin OS=Solanum lycopersicum GN=UBI3 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.231e-20 Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 3 Query: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 296 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 48 HSP 2 Score: 82.0333 bits (201), Expect = 1.021e-15 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 3 Query: 27 GTRPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152 G PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 35 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CX296273 vs. ExPASy Swiss-Prot
Match: UBIQ_PETCR (Ubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.231e-20 Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 3 Query: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 296 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 48 HSP 2 Score: 82.0333 bits (201), Expect = 1.021e-15 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 3 Query: 27 GTRPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152 G PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 35 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CX296273 vs. ExPASy Swiss-Prot
Match: UBIQ_PEA (Ubiquitin OS=Pisum sativum GN=PU1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.231e-20 Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 3 Query: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 296 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 48 HSP 2 Score: 82.0333 bits (201), Expect = 1.021e-15 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 3 Query: 27 GTRPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152 G PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 35 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CX296273 vs. ExPASy Swiss-Prot
Match: UBIQ_ORYSJ (Ubiquitin OS=Oryza sativa subsp. japonica GN=UBQ1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.231e-20 Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 3 Query: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 296 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 48 HSP 2 Score: 82.0333 bits (201), Expect = 1.021e-15 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 3 Query: 27 GTRPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152 G PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 35 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CX296273 vs. ExPASy Swiss-Prot
Match: UBIQ_NICSY (Ubiquitin OS=Nicotiana sylvestris GN=UBICEP52-7 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.231e-20 Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 3 Query: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 296 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 48 HSP 2 Score: 82.0333 bits (201), Expect = 1.021e-15 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 3 Query: 27 GTRPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152 G PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 35 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CX296273 vs. ExPASy Swiss-Prot
Match: UBIQ_MAIZE (Ubiquitin OS=Zea mays GN=UBF9 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.231e-20 Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 3 Query: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 296 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 48 HSP 2 Score: 82.0333 bits (201), Expect = 1.021e-15 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 3 Query: 27 GTRPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152 G PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 35 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CX296273 vs. ExPASy Swiss-Prot
Match: UBIQ_LUPPO (Ubiquitin OS=Lupinus polyphyllus PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.231e-20 Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 3 Query: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 296 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 48 HSP 2 Score: 82.0333 bits (201), Expect = 1.021e-15 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 3 Query: 27 GTRPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152 G PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 35 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76 The following BLAST results are available for this feature:
BLAST of CX296273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296273 ID=CX296273; Name=CX296273; organism=Citrus clementina; type=EST; length=298bpback to top |