CX296280
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_RALEH (1-aminocyclopropane-1-carboxylate deaminase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=acdS PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.082e-18 Identity = 53/132 (40.15%), Postives = 76/132 (57.58%), Query Frame = 3 Query: 243 HLTPIPSHVFSLGHFPTPIHKWNL--PNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISK 629 +L P H + G PTPIH + +L E++ KRDD SG+ GNK RKLE+++ D +AQGAD +++IGGIQSNH R A A +L L C L+ D GN+ + R++GA + L+S+ Sbjct: 2 NLKQFPRHSLTFG--PTPIHPLSRLSESLGGKVELYAKRDDCNSGLAFGGNKTRKLEYVIPDVLAQGADTLVSIGGIQSNHTRQVAAIAAHLGLKCVLVQENWVNYSDAVYDRVGNIQMSRIMGADVRLVSE 131
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_THEMA (Putative 1-aminocyclopropane-1-carboxylate deaminase OS=Thermotoga maritima GN=TM_0225 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.666e-17 Identity = 48/123 (39.02%), Postives = 74/123 (60.16%), Query Frame = 3 Query: 288 PTPIHKWNLPNLPHNTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSV 656 PTP+ + + +++KRDDL+ + SGNK+RKLE+L+ +A+ +GA + T GG+QSNH RA A ++ L L LR + + L GNLL++ L+GA I +S EEY +I + Sbjct: 9 PTPVQFLKRLSEKYGFNIYVKRDDLTELVGSGNKIRKLEYLLWEALKKGATTVFTCGGLQSNHARATAYVSRRYGLKPVLFLRKGEKV------LNGNLLLDILLGAEIVEVSPEEYERIDEI 125
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_PYRHO (Putative 1-aminocyclopropane-1-carboxylate deaminase OS=Pyrococcus horikoshii GN=PH0054 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.481e-17 Identity = 46/107 (42.99%), Postives = 70/107 (65.42%), Query Frame = 3 Query: 291 TPIHKWNLPNLPHN--TEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVG 605 TPI LPN+ +V++KRDDL+G+ + GNK+RKLE+L+ DA+++GAD +IT+G + SNH +AAK L LD L+LR + L GN L+++++G Sbjct: 22 TPIQY--LPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGADVVITVGAVHSNHAFVTGLAAKKLGLDAILVLRGKE-------ELKGNYLLDKIMG 119
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_PYRAB (Putative 1-aminocyclopropane-1-carboxylate deaminase OS=Pyrococcus abyssi GN=PYRAB00630 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.547e-17 Identity = 44/90 (48.89%), Postives = 63/90 (70.00%), Query Frame = 3 Query: 336 EVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVG 605 +V++KRDDL+G+ + GNK+RKLEFL+ DA+++G D +ITIG + SNH A+AAK L L LILR +V L GN L+++L+G Sbjct: 37 DVYVKRDDLTGLGIGGNKIRKLEFLLGDALSRGCDTVITIGAVHSNHAFVTALAAKKLGLGAVLILRGEEV-------LKGNYLLDKLMG 119
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: DCYD_SERP5 (D-cysteine desulfhydrase OS=Serratia proteamaculans (strain 568) GN=dcyD PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.566e-16 Identity = 45/110 (40.91%), Postives = 65/110 (59.09%), Query Frame = 3 Query: 291 TPIHKWNLPNLPHNTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 TP+ K + + E+++KRDD++ M + GNK+RKLEFL ADA+ QGAD ++T G IQSNH R A A L L C +L +++ GN L+ L A +E+ Sbjct: 20 TPLEKLSRLSDYLGREIYIKRDDVTPMAMGGNKLRKLEFLAADALRQGADTLVTAGAIQSNHVRQTAAVAAKLGLHCVALLENPIDTQEENYLTNGNRLLLGLFNAQVEM 129
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_BURCC (1-aminocyclopropane-1-carboxylate deaminase OS=Burkholderia cenocepacia (strain MC0-3) GN=acdS PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.566e-16 Identity = 50/131 (38.17%), Postives = 74/131 (56.49%), Query Frame = 3 Query: 243 HLTPIPSHVFSLGHFPTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELIS 626 +L P + + G PTPI K +L E++ KR+D SG+ GNK RKLE+L+ DA+AQGAD +++IGG+QSN R A A +L + C L+ D GN+ + R++GA + L+S Sbjct: 2 NLQRFPRYPLTFG--PTPIQPLKRLSAHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLVPDALAQGADTLVSIGGVQSNQTRQVAAVAAHLGMKCVLVQEHWVNYEDPVYDRVGNIQLSRMMGADVRLVS 130
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_BRAJA (1-aminocyclopropane-1-carboxylate deaminase OS=Bradyrhizobium japonicum GN=acdS PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.566e-16 Identity = 44/115 (38.26%), Postives = 68/115 (59.13%), Query Frame = 3 Query: 288 PTPIHKWNL--PNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELI 623 PTPI K +L N E++ KR+D SG+ GNK+RKLE+++ DA+A AD +++IGG+QSNH R A A + + C L+ D GN+++ R++GA + L+ Sbjct: 14 PTPIEKLERLSKHLGGNVEIYAKREDCNSGLAYGGNKLRKLEYIIPDAIASNADTLVSIGGVQSNHTRMIAAVAAKIGMKCRLVQEAWVPHEDAVYDRVGNIMLSRIMGADVRLV 128
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_BURTA (1-aminocyclopropane-1-carboxylate deaminase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=acdS PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.575e-16 Identity = 50/130 (38.46%), Postives = 72/130 (55.38%), Query Frame = 3 Query: 243 HLTPIPSHVFSLGHFPTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELI 623 +L P + + G PTPI K +L E++ KRDD SG+ GNK RKLE+L+ DA+AQG D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L+ Sbjct: 2 NLQKFPRYPLTFG--PTPIQPLKRLSAHLGGKVELYAKRDDCNSGLAFGGNKTRKLEYLIPDALAQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYHDAVYDRVGNIQMSRMMGADVRLV 129
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_BURP1 (1-aminocyclopropane-1-carboxylate deaminase OS=Burkholderia pseudomallei (strain 1710b) GN=acdS PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.575e-16 Identity = 50/130 (38.46%), Postives = 72/130 (55.38%), Query Frame = 3 Query: 243 HLTPIPSHVFSLGHFPTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELI 623 +L P + + G PTPI K +L E++ KRDD SG+ GNK RKLE+L+ DA+AQG D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L+ Sbjct: 2 NLQKFPRYPLTFG--PTPIQPLKRLSAHLGGKVELYAKRDDCNSGLAFGGNKTRKLEYLIPDALAQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYHDAVYDRVGNIQMSRMMGADVRLV 129
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: DCYD_SALTY (D-cysteine desulfhydrase OS=Salmonella typhimurium GN=dcyD PE=3 SV=3) HSP 1 Score: 83.1889 bits (204), Expect = 1.463e-15 Identity = 53/128 (41.41%), Postives = 72/128 (56.25%), Query Frame = 3 Query: 243 HLTPIPSHVFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 HLT P F +G PTP+ LP L E+++KRDD++ + + GNK+RKLEFL+ADA+ +GAD +IT G IQSNH R A A L L C +L ++ GN L+ L IE+ Sbjct: 5 HLTRFPRLEF-IGA-PTPLEY--LPRLSDYLGREIYIKRDDVTPIAMGGNKLRKLEFLVADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEM 128 The following BLAST results are available for this feature:
BLAST of CX296280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296280 ID=CX296280; Name=CX296280; organism=Citrus clementina; type=EST; length=696bpback to top |