CX296364

Overview
NameCX296364
Unique NameCX296364
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length226
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14138 contig Ccv1_Contig14138:309..534. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX296364 vs. ExPASy Swiss-Prot
Match: DNJ10_ARATH (Chaperone protein dnaJ 10 OS=Arabidopsis thaliana GN=ATJ10 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 1.529e-19
Identity = 48/56 (85.71%), Postives = 52/56 (92.86%), Query Frame = -1 
Query:   29 HEVLSDPAQRQAYDAYGKSGISTEAIIDPAAIFAMLFGSELFEDYIGQLAMASVAS 196
            ++VLSD  QRQAYDA GKSGIST+AIIDPAAIFAMLFGSELFE YIGQLAMAS+AS
Sbjct:   55 YQVLSDSGQRQAYDACGKSGISTDAIIDPAAIFAMLFGSELFEGYIGQLAMASMAS 110
The following BLAST results are available for this feature:
BLAST of CX296364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DNJ10_ARATH1.529e-1985.71Chaperone protein dnaJ 10 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionC05139F08SK FerrChloL1 Citrus clementina cDNA clone C05139F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296364 ID=CX296364; Name=CX296364; organism=Citrus clementina; type=EST; length=226bp
GAGGCCTCGCGCCGAATTCGGCAAGAGGAGAAGCCACTGAAGCCATGGCA
AGCTGACCTATATAATCCTCAAAAAGCTCACTTCCAAAAAGCATCGCGAA
GATTGCTGCAGGATCAATAATTGCTTCAGTTGAGATTCCTGATTTCCCAT
AAGCATCATATGCTTGCCGTTGGGCTGGATCACTCAATACCTCGTGCCGA
ATTCGGCACGGGGGGGGGGGCCCGGT
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