CX296375

Overview
NameCX296375
Unique NameCX296375
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length412
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig695 contig Ccv1_Contig695:496..907. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: SCP40_ARATH (Serine carboxypeptidase-like 40 OS=Arabidopsis thaliana GN=SCPL40 PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 6.091e-37
Identity = 72/139 (51.80%), Postives = 94/139 (67.63%), Query Frame = 1
Query:    1 IREYDPCSDKYVNSYLNLAEVQAALHAKHTN----WTTCGDL--RWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYT-DXXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRAL 396
            IRE+DPCSD YV +YLN  EVQAALHA  T     W  C  +  +W DSP+TV+P I++L+  G+RVW++SGDTDGR+PVTS++YS+  +NL  +TAW+PWY                 F TVRGAGH VP+ QP+R+L
Sbjct:  346 IREFDPCSDHYVQAYLNRPEVQAALHANATKLPYEWQPCSSVIKKWNDSPTTVIPLIKELMGQGVRVWVFSGDTDGRIPVTSTKYSLKKMNLTAKTAWHPWYLGGEVGGYTEEYKGKLTFATVRGAGHQVPSFQPKRSL 484          
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: SCP24_ARATH (Serine carboxypeptidase 24 OS=Arabidopsis thaliana GN=SCPL24 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.149e-35
Identity = 70/141 (49.65%), Postives = 90/141 (63.83%), Query Frame = 1
Query:   10 YDPCSDKYVNSYLNLAEVQAALHAKHTN----WTTCGDL---RWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYTDXXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRALIMISS 411
            YDPC++ Y   Y N  +VQ A+HA  T     WT C D+    W DS  T+LP  ++L ASG+R+WI+SGDTD  VPVT++R+S++ LNLPV+T WYPWYTD              F TVRGAGH VP  +P+RALI+  S
Sbjct:  314 YDPCTESYAEKYFNRPDVQRAMHANVTGIRYKWTACSDVLIKTWKDSDKTMLPIYKELAASGLRIWIFSGDTDSVVPVTATRFSLSHLNLPVKTRWYPWYTDNQVGGWTEVYKGLTFATVRGAGHEVPLFEPKRALILFRS 454          
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: SCP22_ARATH (Serine carboxypeptidase-like 22 OS=Arabidopsis thaliana GN=SCPL22 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 3.342e-35
Identity = 69/144 (47.92%), Postives = 90/144 (62.50%), Query Frame = 1
Query:    7 EYDPCSDKYVNSYLNLAEVQAALHAKHT----NWTTCGDL-----RWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYTDXXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRALIMISS 411
            +YDPC++ Y   Y N  EVQ A+HA HT     WT C D       W DS +++LP  ++LIA+G+R+W+YSGDTD  +PVT++RYS+  LNL V+T WYPWY+               F TVRGAGH VP  QPQ ALI++ S
Sbjct:  310 QYDPCTENYAEIYYNRPEVQRAMHANHTAIPYKWTACSDSVFNNWNWRDSDNSMLPIYKELIAAGLRIWVYSGDTDSVIPVTATRYSLGKLNLRVKTRWYPWYSGNQVGGRTEVYEGLTFVTVRGAGHEVPFFQPQSALILLRS 453          
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: CBP23_HORVU (Serine carboxypeptidase II-3 OS=Hordeum vulgare GN=CXP;2-3 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 9.725e-35
Identity = 73/148 (49.32%), Postives = 92/148 (62.16%), Query Frame = 1
Query:    1 IREYDPCSDKYVNSYLNLAEVQAALHAKHTN----WTTCGDL--RWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYTD-----XXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRALIMISS 411
            I  +DPC+D YV +YLN  +VQ ALHA  T     W+ C D+  RW DS  TVLP IQ+L+ + IRVW+YSGDTDGRVPVTSSR S+N L LPV   W PW++                      TVRGAGH VP+ QP+RAL+++ +
Sbjct:  353 IDNFDPCTDYYVEAYLNRPDVQKALHANVTRLDHPWSACSDVLTRWVDSAKTVLPIIQELMKNSIRVWVYSGDTDGRVPVTSSRLSVNQLQLPVAAKWRPWFSSTKGAGEVGGYIVQYKGDLSLVTVRGAGHEVPSYQPRRALVLVQN 500          
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: SCP34_ARATH (Serine carboxypeptidase-like 34 OS=Arabidopsis thaliana GN=SCPL34 PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 8.232e-34
Identity = 65/138 (47.10%), Postives = 90/138 (65.22%), Query Frame = 1
Query:   10 YDPCSDKYVNSYLNLAEVQAALHAKHTN----WTTCGDLR--WTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYTDXXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRALIMI 405
            YDPC+ +Y   Y+N  +VQ ALHA  TN    WT C D    W+D+P+++LPT++ L+++G+RVW++SGDTDGR+PVT++RYS+  L L +   W PWYT               F TVRGAGH VPT +P+ AL +I
Sbjct:  348 YDPCASEYTEKYMNRKDVQEALHANVTNISYPWTHCSDTVSFWSDAPASMLPTLRTLVSAGLRVWVFSGDTDGRIPVTATRYSLKKLGLKIVQDWTPWYTKLQVGGWTVEYDGLMFVTVRGAGHQVPTFKPREALQLI 485          
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: CBP2_WHEAT (Serine carboxypeptidase 2 OS=Triticum aestivum GN=CBP2 PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 5.336e-33
Identity = 63/139 (45.32%), Postives = 89/139 (64.03%), Query Frame = 1
Query:   10 YDPCSDKYVNSYLNLAEVQAALHAKHTN-----WTTCGDL---RWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYTDXXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRALIM 402
            YDPC+++Y  +Y N  +VQ ALHA  T      W TC D     W D+P ++LP  ++LIA+G+R+W++SGDTD  VP+T++RYSI AL LP  T+WYPWY D                +VRGAGH VP ++P++AL++
Sbjct:  288 YDPCTERYSTAYYNRRDVQMALHANVTGAMNYTWATCSDTINTHWHDAPRSMLPIYRELIAAGLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVL 426          
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: SCP32_ARATH (Serine carboxypeptidase-like 32 OS=Arabidopsis thaliana GN=SCPL32 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 9.102e-33
Identity = 69/143 (48.25%), Postives = 84/143 (58.74%), Query Frame = 1
Query:   10 YDPCSDKYVNSYLNLAEVQAALHAKH----TNWTTCGD-----LRWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYTDXXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRALIMISS 411
            +DPC D Y   + N A+VQ ALHA       NWT C D       WTDS  +VLP  ++LIA G RVW+YSGDTDGRVPV S+RY IN L LP++TAW PWY +              F T RGAGH VP+ +P  +L   S+
Sbjct:  310 FDPCLDDYAKVFYNRADVQKALHATDGVHLKNWTICNDDILNHWNWTDSKRSVLPIYKKLIAGGFRVWVYSGDTDGRVPVLSTRYCINKLELPIKTAWRPWYHETQVSGWFQEYEGLTFATFRGAGHDVPSFKPSESLAFFSA 452          
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: CBP21_HORVU (Serine carboxypeptidase II-1 (Fragment) OS=Hordeum vulgare GN=CXP;2-1 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.553e-32
Identity = 65/138 (47.10%), Postives = 87/138 (63.04%), Query Frame = 1
Query:    4 REYDPCSDKYVNSYLNLAEVQAALHAKHT----NWTTCGDL---RWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYTDXXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRAL 396
            R YDPC+++Y   Y NL EVQ A  A  T    +WT C D+    W DSP ++LP  ++LIA+GIR+W++SGD D  VP+T++RYSI+AL LP  T WYPWY +                T+RGAGH VP ++PQ+AL
Sbjct:  165 RGYDPCTEQYSTKYYNLPEVQKAFRANVTGIPYSWTACSDVLSDHWKDSPRSMLPIYRELIAAGIRIWVFSGDADSVVPLTATRYSIDALYLPTVTNWYPWYDEEEVAGWCQVYKGLTLVTIRGAGHEVPLHRPQQAL 302          
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: SCP23_ARATH (Putative serine carboxypeptidase-like 23 OS=Arabidopsis thaliana GN=SCPL23 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 3.459e-32
Identity = 63/142 (44.37%), Postives = 89/142 (62.68%), Query Frame = 1
Query:    7 EYDPCSDKYVNSYLNLAEVQAALHAKHTN----WTTCGDL---RWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYTDXXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRALIMISS 411
            EYDPC++ Y   Y N  +VQ A+HA  T+    WT C  +    W DS  ++LP  ++L A+G+R+W++SGDTD  VPVT +R +++ LNLPV+T WYPWY++              F T+RGAGH VP  QP+RAL ++ S
Sbjct:  302 EYDPCTESYAEIYYNRPDVQRAMHANLTSIPYKWTLCNMVVNNNWKDSEFSMLPIYKELTAAGLRIWVFSGDTDAVVPVTGTRLALSKLNLPVKTPWYPWYSEKQVGGWTEVYEGLTFATIRGAGHEVPVLQPERALTLLRS 443          
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: SCP30_ARATH (Putative serine carboxypeptidase-like 30 OS=Arabidopsis thaliana GN=SCPL30 PE=2 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 1.006e-31
Identity = 67/141 (47.52%), Postives = 84/141 (59.57%), Query Frame = 1
Query:   10 YDPCSDKYVNSYLNLAEVQAALHAKH----TNWTTCGDL---RWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYTDXXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRALIMISS 411
            YDPC D YV  Y N A+VQ ALHA       NW+ C       WT    +VLP  Q+LIA G+R+W+YSGDTDG +PV  +RYS+NAL LP++TAW PWY +              F T RGAGH VP+ +P  +L  IS+
Sbjct:  333 YDPCLDDYVKVYYNRADVQKALHASDGVNLKNWSICNMEIFHNWTYVVQSVLPIYQKLIAGGLRIWVYSGDTDGCIPVLGTRYSLNALGLPIKTAWRPWYHEKQVSGWVQEYDGLTFATFRGAGHTVPSFKPSSSLAFISA 473          
The following BLAST results are available for this feature:
BLAST of CX296375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
SCP40_ARATH6.091e-3751.80Serine carboxypeptidase-like 40 OS=Arabidopsis tha... [more]
SCP24_ARATH1.149e-3549.65Serine carboxypeptidase 24 OS=Arabidopsis thaliana... [more]
SCP22_ARATH3.342e-3547.92Serine carboxypeptidase-like 22 OS=Arabidopsis tha... [more]
CBP23_HORVU9.725e-3549.32Serine carboxypeptidase II-3 OS=Hordeum vulgare GN... [more]
SCP34_ARATH8.232e-3447.10Serine carboxypeptidase-like 34 OS=Arabidopsis tha... [more]
CBP2_WHEAT5.336e-3345.32Serine carboxypeptidase 2 OS=Triticum aestivum GN=... [more]
SCP32_ARATH9.102e-3348.25Serine carboxypeptidase-like 32 OS=Arabidopsis tha... [more]
CBP21_HORVU1.553e-3247.10Serine carboxypeptidase II-1 (Fragment) OS=Hordeum... [more]
SCP23_ARATH3.459e-3244.37Putative serine carboxypeptidase-like 23 OS=Arabid... [more]
SCP30_ARATH1.006e-3147.52Putative serine carboxypeptidase-like 30 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionC05139G09SK FerrChloL1 Citrus clementina cDNA clone C05139G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296375 ID=CX296375; Name=CX296375; organism=Citrus clementina; type=EST; length=412bp
ATCAGAGAATATGACCCCTGCTCCGACAAGTACGTTAATTCCTATTTAAA
CCTTGCCGAGGTGCAAGCAGCTCTTCATGCGAAACATACCAACTGGACAA
CTTGCGGCGACTTGAGATGGACCGACAGCCCATCAACTGTGCTTCCAACA
ATACAGCAGCTGATAGCAAGTGGAATTAGGGTGTGGATATACAGCGGTGA
CACAGATGGGCGAGTCCCAGTGACATCCTCTAGATACTCCATCAATGCTC
TGAACCTTCCGGTTGAAACTGCTTGGTACCCATGGTACACTGATGGTGAG
GTTGGTGGATATGTGCTCGGGTACAAGGGAGTGGTATTCACTACTGTTAG
AGGGGCAGGGCATATGGTTCCTACTAACCAGCCACAGCGAGCTCTCATCA
TGATCTCATCTT
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