CX296514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296514 vs. ExPASy Swiss-Prot
Match: EF104_ARATH (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF104 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.552e-31 Identity = 85/205 (41.46%), Postives = 110/205 (53.66%), Query Frame = 1 Query: 31 MASLNEASTLELISQYLLADQYFTSSIDHTHSFKNISNLPQSPSLFNNPXXXXXXXXXXXXXDRDNINSRNKPSSTLKQRKPACVKNVTIPQTTSFNLMSCSNVNDDADNPVAVKNKDPXXXXXXXXXXXXXXIEEKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNSAFRLRGSKAILNFPLEVGGTLDS 645 MA+ EA ++ ISQ+LL D + + DH PSLF N R N KP+STL QRKP + N+++ +T V+ K + EE+HYRGVRRRPWG+YAAEIRDPN+KG R+WLGT+DTAVEA +AYD +AF+LRG KAILNFPL+V T ++ Sbjct: 1 MATKQEALAIDFISQHLLTD-FVSMETDH-------------PSLFTNQLHNFHSETGP----RTITNQSPKPNSTLNQRKPP-LPNLSVSRT------------------VSTKTEKEE--------------EERHYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFPLDVRVTSET 154
BLAST of CX296514 vs. ExPASy Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.696e-29 Identity = 65/129 (50.39%), Postives = 84/129 (65.12%), Query Frame = 1 Query: 244 KPSSTLKQRKPACVKNVTIPQTTSFNLMSCSNVNDDADNPVAVKNKDPXXXXXXXXXXXXXXIEEKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNSAFRLRGSKAILNFPLEVG 630 +P + RKP +++P T + + N + PV+ + E+KHYRGVR+RPWG++AAEIRDPN++GSRVWLGTFDTA+EAA+AYD +AFRLRGSKAILNFPLEVG Sbjct: 110 EPELKSQIRKPPL--KISLPAKTEWIQFAAENTKPEVTKPVSEE-------------------EKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNFPLEVG 217
BLAST of CX296514 vs. ExPASy Swiss-Prot
Match: ERF5_NICSY (Ethylene-responsive transcription factor 5 OS=Nicotiana sylvestris GN=ERF5 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.133e-29 Identity = 89/229 (38.86%), Postives = 116/229 (50.66%), Query Frame = 1 Query: 31 MASLNEAST-LELISQYLLADQYF---------------------TSSIDHTHSFK---NISNLPQSPSL-----FNNPXXXXXXXXXXXXXDRDNINSRNKPSSTLKQRKPACVKNVTIPQTTSFNLMSCSNVNDDADNPVAVKNKDPXXXXXXXXXXXXXXIEEKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNSAFRLRGSKAILNFPLEV 627 MAS E ST L+LI Q+LL D F + S+D + SF+ N + QS +L FNN + S + ++ K+RKP+ N+ IP V + V + E+KHYRGVR+RPWG++AAEIRDPNRKG+RVWLGTFDTA+EAAKAYD +A++LRGSKAI+NFPLEV Sbjct: 1 MASPQENSTTLDLIRQHLLDDNVFLEHYCSETETTTLIYSQSSSSSESLDQSFSFEPTLNYATTAQSSNLEVSTFFNNSKTEFDSFEFGTIPNVSAARSSSLKQTSFKERKPSL--NIAIP------------VKQEVVQKVELA-----------------PTEKKHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAYKLRGSKAIVNFPLEV 198
BLAST of CX296514 vs. ExPASy Swiss-Prot
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.192e-28 Identity = 55/65 (84.62%), Postives = 64/65 (98.46%), Query Frame = 1 Query: 433 EEKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNSAFRLRGSKAILNFPLEV 627 E+KHYRGVR+RPWG++AAEIRDPNRKG+RVWLGTFDTA+EAAKAYD +AF+LRGSKAI+NFPLEV Sbjct: 141 EKKHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAFKLRGSKAIVNFPLEV 205
BLAST of CX296514 vs. ExPASy Swiss-Prot
Match: EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana GN=ERF105 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.365e-27 Identity = 53/66 (80.30%), Postives = 62/66 (93.94%), Query Frame = 1 Query: 433 EEKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNSAFRLRGSKAILNFPLEVG 630 +++HYRGVRRRPWG+YAAEIRDPN+KG RVWLGTFDTA+EAA+ YD +AF+LRGSKAILNFPLE G Sbjct: 68 DQRHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFPLEAG 133
BLAST of CX296514 vs. ExPASy Swiss-Prot
Match: EF103_ARATH (Ethylene-responsive transcription factor 6 OS=Arabidopsis thaliana GN=ERF6 PE=2 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 1.670e-26 Identity = 79/216 (36.57%), Postives = 101/216 (46.76%), Query Frame = 1 Query: 31 MASLNEASTLELISQYLLAD--------------QYFTSSIDHTHSFKNISNLPQSPSLFNNPXXXXXXXXXXXXXDRDNIN---SRNKPSSTLKQRKPACVKNVTIPQTTSFNLMSCSNVNDDADNPVAVKNKDPXXXXXXXXXXXXXXIEEKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNSAFRLRGSKAILNFPLEV 627 MA+ NE S L LI +YLL + FTS F P+ L N + N P T++ + +K + P T + + N + PV E++HYRGVR RPWG++AAEIRDP R+G+RVWLGTF+TA+EAA+AYD AFRLRGSKAILNFPLEV Sbjct: 1 MATPNEVSALFLIKKYLLDELSPLPTTATTNRWMNDFTSFDQTGFEFSEFETKPEIIDLVTPKPEIFDFDVKSEIPSESNDSFTFQSNPPRVTVQSNRKPPLK-IAPPNRTKWIQFATGNPKPELPVPVVAAE------------------EKRHYRGVRMRPWGKFAAEIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRLRGSKAILNFPLEV 197
BLAST of CX296514 vs. ExPASy Swiss-Prot
Match: EF107_ARATH (Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana GN=ERF107 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.758e-24 Identity = 46/66 (69.70%), Postives = 60/66 (90.91%), Query Frame = 1 Query: 433 EEKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNSAFRLRGSKAILNFPLEVG 630 E +HYRGVRRRPWG++AAEIRDP +KGSR+WLGTF++ ++AA+AYD +AF+LRG KA+LNFPL+ G Sbjct: 103 ETRHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNFPLDAG 168
BLAST of CX296514 vs. ExPASy Swiss-Prot
Match: EF106_ARATH (Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana GN=ERF106 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.758e-24 Identity = 46/67 (68.66%), Postives = 61/67 (91.04%), Query Frame = 1 Query: 430 IEEKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNSAFRLRGSKAILNFPLEVG 630 ++ +HYRGVRRRPWG++AAEIRDP +KGSR+WLGTF++ V+AA+AYD +AF+LRG KA+LNFPL+ G Sbjct: 105 VDARHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPLDAG 171
BLAST of CX296514 vs. ExPASy Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.120e-22 Identity = 56/128 (43.75%), Postives = 76/128 (59.38%), Query Frame = 1 Query: 244 KPSSTLKQRKPACVKNVTIPQTTSFNLMSCSNVNDDADNPVAVKNKDPXXXXXXXXXXXXXXIEEKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNSAFRLRGSKAILNFPLEV 627 +PSS+ + +V I SF + V + +PV+ + KHYRGVR+RPWG++AAEIRDP + G+RVWLGTF+TA +AA AYD +AFR+RGS+A+LNFPL V Sbjct: 96 EPSSSSSDEDRSSFPSVKIETPESFAAVDSVPVKKEKTSPVSAA---------------VTAAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRV 208
BLAST of CX296514 vs. ExPASy Swiss-Prot
Match: EF101_ARATH (Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana GN=ERF2 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.463e-22 Identity = 46/66 (69.70%), Postives = 59/66 (89.39%), Query Frame = 1 Query: 430 IEEKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNSAFRLRGSKAILNFPLEV 627 ++ KHYRGVR+RPWG++AAEIRDP + G+RVWLGTF+TA +AA AYD +AFR+RGS+A+LNFPL V Sbjct: 112 VKAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALLNFPLRV 177 The following BLAST results are available for this feature:
BLAST of CX296514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296514 ID=CX296514; Name=CX296514; organism=Citrus clementina; type=EST; length=661bpback to top |