CX296644
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296644 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 1.825e-40 Identity = 69/112 (61.61%), Postives = 81/112 (72.32%), Query Frame = -3 Query: 386 KCGIAMEASYXXXXXXXXXXXXXXXXXXXXXPAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCTHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKP 721 KCGIA+E SY P VCDNYY+CP+S TCCC++EYG C+AWGCCPLE ATCCDDHYSCC H+YPICNV+ GTCLM+KD+PL V+AL+RT AKP Sbjct: 333 KCGIAVEPSYPLKKGENPPNPGPTPPSPTPPPTVCDNYYTCPDSTTCCCIYEYGKYCYAWGCCPLEGATCCDDHYSCCPHEYPICNVQQGTCLMAKDSPLAVKALKRTLAKP 444
BLAST of CX296644 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.112e-40 Identity = 67/119 (56.30%), Postives = 84/119 (70.59%), Query Frame = -3 Query: 365 KCGIAMEASYXXXXXXXXXXXXXXXXXXXXXPAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCTHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKPYWAHGNQ 721 KCGIA+E SY P CD+YY+CPESNTCCC+FEYG CFAWGCCPLEAATCCDD+YSCC H+YP+C++ GTCL+SK++P V+AL+R PA P+W+ G + Sbjct: 341 KCGIAIEPSYPIKNGENPPNPGPSPPSPIKPPTQCDSYYTCPESNTCCCLFEYGKYCFAWGCCPLEAATCCDDNYSCCPHEYPVCDLDQGTCLLSKNSPFSVKALKRKPATPFWSQGRK 459
BLAST of CX296644 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.715e-35 Identity = 63/119 (52.94%), Postives = 74/119 (62.18%), Query Frame = -3 Query: 362 CGIAMEASYXXXXXXXXXXXXXXXXXXXXXPAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCTHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKPYWAHGNQG 718 CG+A+E SY P CD Y C TCCC+ ++ SCF+WGCCPLE ATCC+DHYSCC HDYPICNVR GTC MSK NPLGV+A++R A+P A GN G Sbjct: 223 CGLAIEPSYPVKTGPNPPKPAPSPPSPVKPPTECDEYSQCAVGTTCCCILQFRRSCFSWGCCPLEGATCCEDHYSCCPHDYPICNVRQGTCSMSKGNPLGVKAMKRILAQPIGAFGNGG 341
BLAST of CX296644 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 5.506e-29 Identity = 59/117 (50.43%), Postives = 69/117 (58.97%), Query Frame = -3 Query: 389 KCGIAMEASYXXXXXXXXXXXXXXXXXXXXXPA------VCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCTHDYPICNVRAGTCLMSKDNPLGVRALRRTPAK 721 KCGIAM ASY P VCD+ +SCP +TCCC F + N C WGCCP+E ATCC DH SCC DYP+CN RAGTC SK++PL V+AL+RT AK Sbjct: 346 KCGIAMMASYPTKSGANPPKPSPTPPTPPTPPPPSAPDHVCDDNFSCPAGSTCCCAFGFRNLCLVWGCCPVEGATCCKDHASCCPPDYPVCNTRAGTCSASKNSPLSVKALKRTLAK 462
BLAST of CX296644 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.006e-22 Identity = 48/116 (41.38%), Postives = 58/116 (50.00%), Query Frame = -3 Query: 386 KCGIAMEASYXXXXXXXXXXXXXXXXXXXXXPAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCTHDYPICNVRAGTCLMSKDNPLGVRA----LRRTPAKP 721 KCGIAM ASY CD Y CP TCCC + N C WGCCP+E ATCC DH +CC +YP+CN +A TC SK++P +R R P +P Sbjct: 363 KCGIAMMASYPIKKGPNPKPSPPSPAPSPPQQ--CDRYSKCPAGTTCCCNYGIRNHCIVWGCCPVEGATCCKDHSTCCPKEYPVCNAKARTCSKSKNSPYNIRTPAAMARSVPEQP 476 The following BLAST results are available for this feature:
BLAST of CX296644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296644 ID=CX296644; Name=CX296644; organism=Citrus clementina; type=EST; length=723bpback to top |