CX296660
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296660 vs. ExPASy Swiss-Prot
Match: YTHD1_MOUSE (YTH domain family protein 1 OS=Mus musculus GN=Ythdf1 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.512e-23 Identity = 53/92 (57.61%), Postives = 66/92 (71.74%), Query Frame = -2 Query: 452 QDKWSGQFPVKWHIIKDVPNSQFRHIILEKNDNKPVTNSRDTQEVELEQGIEMLNIFKNYESYSSILDDFHFYEQRQKAMQ-ERKAGQQANR 724 QDKW G+F VKW +KDVPN+Q RHI LE NDNKPVTNSRDTQEV LE+ ++L I +Y+ +SI DDF YE+RQ+ + RK Q N+ Sbjct: 467 QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEEVVRKERQNRNK 558
BLAST of CX296660 vs. ExPASy Swiss-Prot
Match: YTHD2_MACFA (YTH domain family protein 2 OS=Macaca fascicularis GN=YTHDF2 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.022e-22 Identity = 50/88 (56.82%), Postives = 64/88 (72.73%), Query Frame = -2 Query: 461 QDKWSGQFPVKWHIIKDVPNSQFRHIILEKNDNKPVTNSRDTQEVELEQGIEMLNIFKNYESYSSILDDFHFYEQRQKAMQERKAGQQ 724 QDKW G+F V+W +KDVPNSQ RHI LE N+NKPVTNSRDTQEV LE+ ++L I +Y+ +SI DDF YE+RQ+ + K +Q Sbjct: 488 QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVKKERQ 575
BLAST of CX296660 vs. ExPASy Swiss-Prot
Match: YTHD2_HUMAN (YTH domain family protein 2 OS=Homo sapiens GN=YTHDF2 PE=1 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.022e-22 Identity = 50/88 (56.82%), Postives = 64/88 (72.73%), Query Frame = -2 Query: 461 QDKWSGQFPVKWHIIKDVPNSQFRHIILEKNDNKPVTNSRDTQEVELEQGIEMLNIFKNYESYSSILDDFHFYEQRQKAMQERKAGQQ 724 QDKW G+F V+W +KDVPNSQ RHI LE N+NKPVTNSRDTQEV LE+ ++L I +Y+ +SI DDF YE+RQ+ + K +Q Sbjct: 488 QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVKKERQ 575
BLAST of CX296660 vs. ExPASy Swiss-Prot
Match: YTHD2_BOVIN (YTH domain family protein 2 OS=Bos taurus GN=YTHDF2 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.022e-22 Identity = 50/88 (56.82%), Postives = 64/88 (72.73%), Query Frame = -2 Query: 461 QDKWSGQFPVKWHIIKDVPNSQFRHIILEKNDNKPVTNSRDTQEVELEQGIEMLNIFKNYESYSSILDDFHFYEQRQKAMQERKAGQQ 724 QDKW G+F V+W +KDVPNSQ RHI LE N+NKPVTNSRDTQEV LE+ ++L I +Y+ +SI DDF YE+RQ+ + K +Q Sbjct: 489 QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVKKERQ 576
BLAST of CX296660 vs. ExPASy Swiss-Prot
Match: YTHD1_HUMAN (YTH domain family protein 1 OS=Homo sapiens GN=YTHDF1 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.022e-22 Identity = 52/92 (56.52%), Postives = 66/92 (71.74%), Query Frame = -2 Query: 452 QDKWSGQFPVKWHIIKDVPNSQFRHIILEKNDNKPVTNSRDTQEVELEQGIEMLNIFKNYESYSSILDDFHFYEQRQKAMQ-ERKAGQQANR 724 QDKW G+F V+W +KDVPN+Q RHI LE NDNKPVTNSRDTQEV LE+ ++L I +Y+ +SI DDF YE+RQ+ + RK Q N+ Sbjct: 467 QDKWKGKFDVQWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIISSYKHTTSIFDDFAHYEKRQEEEEVVRKERQSRNK 558
BLAST of CX296660 vs. ExPASy Swiss-Prot
Match: YTHD3_PONAB (YTH domain family protein 3 OS=Pongo abelii GN=YTHDF3 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.743e-22 Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = -2 Query: 452 QDKWSGQFPVKWHIIKDVPNSQFRHIILEKNDNKPVTNSRDTQEVELEQGIEMLNIFKNYESYSSILDDFHFYEQRQKAMQERKAGQQANR 724 QDKW G+F VKW +KDVPN+Q RHI LE NDNKPVTNSRDTQEV LE+ ++L I ++ +SI DDF YE+RQ+ + + + N+ Sbjct: 494 QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQEEEEAMRRERNRNK 584
BLAST of CX296660 vs. ExPASy Swiss-Prot
Match: YTHD3_MOUSE (YTH domain family protein 3 OS=Mus musculus GN=Ythdf3 PE=1 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.743e-22 Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = -2 Query: 452 QDKWSGQFPVKWHIIKDVPNSQFRHIILEKNDNKPVTNSRDTQEVELEQGIEMLNIFKNYESYSSILDDFHFYEQRQKAMQERKAGQQANR 724 QDKW G+F VKW +KDVPN+Q RHI LE NDNKPVTNSRDTQEV LE+ ++L I ++ +SI DDF YE+RQ+ + + + N+ Sbjct: 494 QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQEEEEAMRRERNRNK 584
BLAST of CX296660 vs. ExPASy Swiss-Prot
Match: YTHD3_HUMAN (YTH domain family protein 3 OS=Homo sapiens GN=YTHDF3 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.743e-22 Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = -2 Query: 452 QDKWSGQFPVKWHIIKDVPNSQFRHIILEKNDNKPVTNSRDTQEVELEQGIEMLNIFKNYESYSSILDDFHFYEQRQKAMQERKAGQQANR 724 QDKW G+F VKW +KDVPN+Q RHI LE NDNKPVTNSRDTQEV LE+ ++L I ++ +SI DDF YE+RQ+ + + + N+ Sbjct: 494 QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQEEEEAMRRERNRNK 584 The following BLAST results are available for this feature:
BLAST of CX296660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296660 ID=CX296660; Name=CX296660; organism=Citrus clementina; type=EST; length=728bpback to top |