CX296676
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296676 vs. ExPASy Swiss-Prot
Match: RK31_ARATH (50S ribosomal protein L31, chloroplastic OS=Arabidopsis thaliana GN=RPL31 PE=1 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 2.012e-42 Identity = 84/129 (65.12%), Postives = 97/129 (75.19%), Query Frame = 2 Query: 8 SARGTFFQIKPSAPILPTRKVKNCAATGSGYRTRA-------VTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLSEIMEIPVLKGEIVLP 373 S +F QI P P L RK A G R +TCRKK++HP+F+EDAKVYCNGELVMTTGGT+KEYVVDVWSGNH FYLG RSA++VDADQVEKFR++F GLSEIMEIPVLKGEI++P Sbjct: 4 SLPNSFLQISPCVPSLQLRKPVMAAVKGGKQSVRRSSNTVVQITCRKKELHPEFHEDAKVYCNGELVMTTGGTKKEYVVDVWSGNHPFYLGNRSALMVDADQVEKFRKRFAGLSEIMEIPVLKGEIIMP 132
BLAST of CX296676 vs. ExPASy Swiss-Prot
Match: RL31_SYNP6 (50S ribosomal protein L31 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rpmE PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.606e-15 Identity = 39/67 (58.21%), Postives = 48/67 (71.64%), Query Frame = 2 Query: 125 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGL 325 K DIHPQ+Y +AKVYCNGE VMT G TQ E VDVWSGNH FY G + + + +VE+F +K+G L Sbjct: 3 KADIHPQWYPEAKVYCNGEEVMTVGSTQPELHVDVWSGNHPFYTGTQKIIDTEG-RVERFLRKYGML 68
BLAST of CX296676 vs. ExPASy Swiss-Prot
Match: RL31_SYNE7 (50S ribosomal protein L31 OS=Synechococcus elongatus (strain PCC 7942) GN=rpmE PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.606e-15 Identity = 39/67 (58.21%), Postives = 48/67 (71.64%), Query Frame = 2 Query: 125 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGL 325 K DIHPQ+Y +AKVYCNGE VMT G TQ E VDVWSGNH FY G + + + +VE+F +K+G L Sbjct: 3 KADIHPQWYPEAKVYCNGEEVMTVGSTQPELHVDVWSGNHPFYTGTQKIIDTEG-RVERFLRKYGML 68
BLAST of CX296676 vs. ExPASy Swiss-Prot
Match: RL31_PROMA (50S ribosomal protein L31 OS=Prochlorococcus marinus GN=rpmE PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.577e-15 Identity = 37/65 (56.92%), Postives = 48/65 (73.85%), Query Frame = 2 Query: 125 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFG 319 KKDIHP +Y DAKV CNGE+VMTTG TQ E VDVWSGNH F+ G + + + +V++F +K+G Sbjct: 3 KKDIHPNWYPDAKVICNGEVVMTTGSTQPEIHVDVWSGNHPFFTGTQKILDTEG-RVDRFMRKYG 66
BLAST of CX296676 vs. ExPASy Swiss-Prot
Match: RL31_THEEB (50S ribosomal protein L31 OS=Thermosynechococcus elongatus (strain BP-1) GN=rpmE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.102e-15 Identity = 36/67 (53.73%), Postives = 52/67 (77.61%), Query Frame = 2 Query: 125 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDAD-QVEKFRQKFGG 322 K +IHPQ+Y +AKVYC+GE++MT G T+ E VD+WSGNH F+ G + +VDA+ +VE+FR+K+ G Sbjct: 3 KPNIHPQWYPEAKVYCDGEVIMTVGSTKPELHVDIWSGNHPFFTGTQK--IVDAEGRVERFRRKYSG 67
BLAST of CX296676 vs. ExPASy Swiss-Prot
Match: RL31_NOSP7 (50S ribosomal protein L31 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rpmE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.102e-15 Identity = 36/65 (55.38%), Postives = 48/65 (73.85%), Query Frame = 2 Query: 125 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFG 319 K DIHP++Y DAKVYCNG++VMT G T+ E VDVWSGNH FY G + + + +VE+F +K+G Sbjct: 3 KADIHPKWYPDAKVYCNGQVVMTIGSTKPELHVDVWSGNHPFYTGTQKIIDTEG-RVERFLRKYG 66
BLAST of CX296676 vs. ExPASy Swiss-Prot
Match: RL31_ANAVT (50S ribosomal protein L31 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rpmE PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.041e-14 Identity = 35/65 (53.85%), Postives = 48/65 (73.85%), Query Frame = 2 Query: 125 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFG 319 K DIHP++Y +AKVYCNG++VMT G T+ E VDVWSGNH FY G + + + +VE+F +K+G Sbjct: 3 KSDIHPKWYPEAKVYCNGQVVMTVGSTKPELHVDVWSGNHPFYTGTQKIIDTEG-RVERFLRKYG 66
BLAST of CX296676 vs. ExPASy Swiss-Prot
Match: RL31_ANASP (50S ribosomal protein L31 OS=Anabaena sp. (strain PCC 7120) GN=rpmE PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.041e-14 Identity = 35/65 (53.85%), Postives = 48/65 (73.85%), Query Frame = 2 Query: 125 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFG 319 K DIHP++Y +AKVYCNG++VMT G T+ E VDVWSGNH FY G + + + +VE+F +K+G Sbjct: 3 KSDIHPKWYPEAKVYCNGQVVMTVGSTKPELHVDVWSGNHPFYTGTQKIIDTEG-RVERFLRKYG 66
BLAST of CX296676 vs. ExPASy Swiss-Prot
Match: RL31_ACAM1 (50S ribosomal protein L31 OS=Acaryochloris marina (strain MBIC 11017) GN=rpmE PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.041e-14 Identity = 35/65 (53.85%), Postives = 49/65 (75.38%), Query Frame = 2 Query: 125 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFG 319 K DIHP++Y +AKVYC+GE+VMT G TQ+E VDVWSGNH F+ G + + + +VE+F +K+G Sbjct: 3 KPDIHPKWYPEAKVYCDGEVVMTVGSTQEELHVDVWSGNHPFFTGTQKIIDTEG-RVERFMRKYG 66
BLAST of CX296676 vs. ExPASy Swiss-Prot
Match: RL31_SYNP2 (50S ribosomal protein L31 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rpmE PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.359e-14 Identity = 36/68 (52.94%), Postives = 49/68 (72.06%), Query Frame = 2 Query: 125 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLS 328 K DIHP++Y DAKV CNGE+VMT G TQ E V++WSGNH FY G + + + +V++F +K+G LS Sbjct: 3 KADIHPEWYPDAKVICNGEVVMTIGSTQPEINVEIWSGNHPFYTGTQKIIDTEG-RVDRFLRKYGMLS 69 The following BLAST results are available for this feature:
BLAST of CX296676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296676 ID=CX296676; Name=CX296676; organism=Citrus clementina; type=EST; length=558bpback to top |