CX296720
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296720 vs. ExPASy Swiss-Prot
Match: Y3800_DICDI (Ankyrin repeat, bromo and BTB domain-containing protein DDB_G0293800 OS=Dictyostelium discoideum GN=DDB_G0293800 PE=4 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.257e-17 Identity = 52/161 (32.30%), Postives = 75/161 (46.58%), Query Frame = 2 Query: 263 RHSSSVAESNQLMMSKPYRSSGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQELNKSLDIK 745 + ++S + S+ S P +SS ++ S SS + + + +K C ++ + F RPVDP+ IPDYF +I PMDLGT+K +LD N YS +F ADVRL F NA+ YN V K A+ L + D K Sbjct: 465 QQNTSSSSSSSTTSSTPSKSSSSTPSKSTSTSSSSSSSSSSSSSSSSNYSDSMNEKNLTF-------CKGLINGMFKKKTSLAFQRPVDPLAEGIPDYFDVIKHPMDLGTIKGKLDNNGYSTIKDFAADVRLMFENALTYNADSSPVWKHAKTLLNAFDQK 618
BLAST of CX296720 vs. ExPASy Swiss-Prot
Match: BRD2_RAT (Bromodomain-containing protein 2 OS=Rattus norvegicus GN=Brd2 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.866e-17 Identity = 44/108 (40.74%), Postives = 61/108 (56.48%), Query Frame = 2 Query: 419 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQELNK 730 P+ PK VT+Q V++K+L H W F +PVD +KL +PDY II +PMD+GT+K RL+ N Y + E + D F+N +YN P + MAQ L K Sbjct: 63 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEK 170 HSP 2 Score: 80.8777 bits (198), Expect = 8.393e-15 Identity = 50/126 (39.68%), Postives = 69/126 (54.76%), Query Frame = 2 Query: 377 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMM--HPA-GWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQELNKSLDIK 745 LP +++Q Q K+ K+ + H C+ ILK L+ H A W F +PVD L + DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+ V MA++L + + Sbjct: 330 LPDSQQQHQS------SKKGKLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 448
BLAST of CX296720 vs. ExPASy Swiss-Prot
Match: BRD2_MOUSE (Bromodomain-containing protein 2 OS=Mus musculus GN=Brd2 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.866e-17 Identity = 44/108 (40.74%), Postives = 61/108 (56.48%), Query Frame = 2 Query: 419 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQELNK 730 P+ PK VT+Q V++K+L H W F +PVD +KL +PDY II +PMD+GT+K RL+ N Y + E + D F+N +YN P + MAQ L K Sbjct: 63 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEK 170 HSP 2 Score: 80.8777 bits (198), Expect = 8.393e-15 Identity = 50/126 (39.68%), Postives = 69/126 (54.76%), Query Frame = 2 Query: 377 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMM--HPA-GWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQELNKSLDIK 745 LP +++Q Q K+ K+ + H C+ ILK L+ H A W F +PVD L + DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+ V MA++L + + Sbjct: 330 LPDSQQQHQS------SKKGKLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 448
BLAST of CX296720 vs. ExPASy Swiss-Prot
Match: BRD2_HUMAN (Bromodomain-containing protein 2 OS=Homo sapiens GN=BRD2 PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 6.866e-17 Identity = 44/108 (40.74%), Postives = 61/108 (56.48%), Query Frame = 2 Query: 419 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQELNK 730 P+ PK VT+Q V++K+L H W F +PVD +KL +PDY II +PMD+GT+K RL+ N Y + E + D F+N +YN P + MAQ L K Sbjct: 64 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEK 171 HSP 2 Score: 80.8777 bits (198), Expect = 8.393e-15 Identity = 50/126 (39.68%), Postives = 69/126 (54.76%), Query Frame = 2 Query: 377 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMM--HPA-GWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQELNKSLDIK 745 LP +++Q Q K+ K+ + H C+ ILK L+ H A W F +PVD L + DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+ V MA++L + + Sbjct: 331 LPDSQQQHQS------SKKGKLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 449
BLAST of CX296720 vs. ExPASy Swiss-Prot
Match: BRD2_CANFA (Bromodomain-containing protein 2 OS=Canis familiaris GN=BRD2 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.866e-17 Identity = 44/108 (40.74%), Postives = 61/108 (56.48%), Query Frame = 2 Query: 419 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQELNK 730 P+ PK VT+Q V++K+L H W F +PVD +KL +PDY II +PMD+GT+K RL+ N Y + E + D F+N +YN P + MAQ L K Sbjct: 64 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEK 171 HSP 2 Score: 80.8777 bits (198), Expect = 8.393e-15 Identity = 50/126 (39.68%), Postives = 69/126 (54.76%), Query Frame = 2 Query: 377 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMM--HPA-GWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQELNKSLDIK 745 LP +++Q Q K+ K+ + H C+ ILK L+ H A W F +PVD L + DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+ V MA++L + + Sbjct: 331 LPDSQQQHQS------SKKGKLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 449
BLAST of CX296720 vs. ExPASy Swiss-Prot
Match: BRD2_BOVIN (Bromodomain-containing protein 2 OS=Bos taurus GN=BRD2 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.866e-17 Identity = 44/108 (40.74%), Postives = 61/108 (56.48%), Query Frame = 2 Query: 419 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQELNK 730 P+ PK VT+Q V++K+L H W F +PVD +KL +PDY II +PMD+GT+K RL+ N Y + E + D F+N +YN P + MAQ L K Sbjct: 64 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEK 171 HSP 2 Score: 80.8777 bits (198), Expect = 8.393e-15 Identity = 50/126 (39.68%), Postives = 69/126 (54.76%), Query Frame = 2 Query: 377 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMM--HPA-GWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQELNKSLDIK 745 LP +++Q Q K+ K+ + H C+ ILK L+ H A W F +PVD L + DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+ V MA++L + + Sbjct: 331 LPDSQQQHQS------SKKGKLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 449
BLAST of CX296720 vs. ExPASy Swiss-Prot
Match: BRDT_HUMAN (Bromodomain testis-specific protein OS=Homo sapiens GN=BRDT PE=1 SV=4) HSP 1 Score: 87.4261 bits (215), Expect = 8.967e-17 Identity = 42/101 (41.58%), Postives = 57/101 (56.44%), Query Frame = 2 Query: 428 KRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQELNK 730 K ++ + + V+LK L H W F RPVD +KL +PDY++II PMDL T+K RL+ Y+ + E + D FSN LYN P + MAQ L K Sbjct: 24 KNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEK 124 HSP 2 Score: 76.2554 bits (186), Expect = 2.067e-13 Identity = 59/206 (28.64%), Postives = 96/206 (46.60%), Query Frame = 2 Query: 140 ATEAVITKKKLKIKFGSQRIE---AVPGSQPCEYGQQQSHVENW---RHSSSVAESNQLMMSKPYRSSGGKKMIASEHSKER--SSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPA---GWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQEL 724 ATE V ++++ F I V G+ Q + V + ++ ++ + S + + +K +A KE ++LP +++Q V K K+ + H CS ILK ++ W F PVD L + +Y+ ++ PMDLGT+K ++D Y + +F ADVRL F N YNPP+ V MA+ L Sbjct: 167 ATEKVFKQQEIPSVFPKTSISPLNVVQGASVNSSSQTAAQVTKGVKRKADTTTPATSAVKASSEFSPTFTEKSVALPPIKENMPKNVLPDSQQQYNVV------KTVKVTEQLRH-CSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARML 365
BLAST of CX296720 vs. ExPASy Swiss-Prot
Match: YCK2_SCHPO (Bromodomain-containing protein C1450.02 OS=Schizosaccharomyces pombe GN=SPCC1450.02 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.171e-16 Identity = 53/165 (32.12%), Postives = 85/165 (51.52%), Query Frame = 2 Query: 269 SSSVAESNQLMMSKPYRSSGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSL---MMHPAGWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQELNKSLDIKMES 754 ++ V +S Q S + ++S + +S P K + V+ K +R K + + CS +LK L + F +PVDP+ D PDYF +I +PMDL T++++L++N YS +EF +D+ L F+N YNPP VH M ++L K E+ Sbjct: 198 AAPVKKSKQKSASTAPPRTRRNSSVSSTSASVAASTAP--KAASPAVLPEGKPRRRKNNSQMRF-CSTVLKELYKRQYESFAFPFYQPVDPVACDCPDYFDVIKEPMDLSTIQSKLNKNEYSTLEEFESDILLMFNNCFTYNPPGTPVHVMGRQLENVFKEKWEA 359 HSP 2 Score: 75.8702 bits (185), Expect = 2.700e-13 Identity = 50/165 (30.30%), Postives = 81/165 (49.09%), Query Frame = 2 Query: 257 NWRHSSSVAESNQLMMSKPYRSSGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQELNKSLDIKME 751 N + S + N+ +S+ SSG + +E +P K++ + ++ K + M C I++ L F PVDP+K +IPDY +I+ PMDLGT++ +L YSV EF+ D+ L FSN LYN E V M + L + + +++ Sbjct: 31 NIQSSDGHNDENEESLSRKRDSSGAT---VGDLKQEEKESMP--KKEPEPTVK--KIRGSGMPPPQQKYCLAIVRQLKRTKNSAPFKVPVDPIKQNIPDYPTIVKNPMDLGTIEKKLTSYEYSVPQEFIDDMNLMFSNCFLYNGTESPVGSMGKALQEVFERQLK 188
BLAST of CX296720 vs. ExPASy Swiss-Prot
Match: BRD4_MOUSE (Bromodomain-containing protein 4 OS=Mus musculus GN=Brd4 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.530e-16 Identity = 47/138 (34.06%), Postives = 70/138 (50.72%), Query Frame = 2 Query: 329 GKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQELNK 730 G + S+ S ++ P A P+ P + T+Q V+LK+L H W F +PVD +KL++PDY+ II PMD+GT+K RL+ N Y + E + D F+N +YN P + MA+ L K Sbjct: 18 GDGLETSQMSTTQAQAQPQPANAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEK 155 HSP 2 Score: 77.0258 bits (188), Expect = 1.212e-13 Identity = 46/125 (36.80%), Postives = 68/125 (54.40%), Query Frame = 2 Query: 389 KRQAQEVIEGPKDKRPKMDRGVTHQ---CSVILKSLMM--HPA-GWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQELNKSLDIK 745 K ++V + + P+ ++ Q CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y + EF ADVRL FSN YNPP+ V MA++L +++ Sbjct: 330 KPPKKDVPDSQQHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMR 454
BLAST of CX296720 vs. ExPASy Swiss-Prot
Match: BRD4_HUMAN (Bromodomain-containing protein 4 OS=Homo sapiens GN=BRD4 PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.530e-16 Identity = 47/138 (34.06%), Postives = 70/138 (50.72%), Query Frame = 2 Query: 329 GKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQELNK 730 G + S+ S ++ P A P+ P + T+Q V+LK+L H W F +PVD +KL++PDY+ II PMD+GT+K RL+ N Y + E + D F+N +YN P + MA+ L K Sbjct: 18 GDGLETSQMSTTQAQAQPQPANAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEK 155 HSP 2 Score: 77.7962 bits (190), Expect = 7.105e-14 Identity = 47/125 (37.60%), Postives = 68/125 (54.40%), Query Frame = 2 Query: 389 KRQAQEVIEGPKDKRPKMDRGVTHQ---CSVILKSLMM--HPA-GWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQELNKSLDIK 745 K ++V + + P+ V+ Q CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y + EF ADVRL FSN YNPP+ V MA++L +++ Sbjct: 329 KPPKKDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMR 453 The following BLAST results are available for this feature:
BLAST of CX296720 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296720 ID=CX296720; Name=CX296720; organism=Citrus clementina; type=EST; length=754bpback to top |