CX296749
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296749 vs. ExPASy Swiss-Prot
Match: PUB35_ARATH (U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35 PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 4.365e-27 Identity = 57/87 (65.52%), Postives = 74/87 (85.06%), Query Frame = 3 Query: 18 VYAYGMVILQLLTAKPAIAITHKVETAIDE-DNLAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLKEVAD 275 +Y++GM++LQLLTAKPAIA+TH VE+A+D D +ILD +AG+WPI+ET+ELAAL L C ELR KDRPDLK+Q+LP LE LK+VA+ Sbjct: 667 IYSFGMILLQLLTAKPAIALTHFVESAMDSNDEFLKILDQKAGNWPIEETRELAALALCCTELRGKDRPDLKDQILPALENLKKVAE 753
BLAST of CX296749 vs. ExPASy Swiss-Prot
Match: PUB52_ARATH (U-box domain-containing protein 52 OS=Arabidopsis thaliana GN=PUB52 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 5.701e-27 Identity = 58/87 (66.67%), Postives = 72/87 (82.76%), Query Frame = 3 Query: 18 VYAYGMVILQLLTAKPAIAITHKVETAIDED-NLAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLKEVAD 275 VY+ G+VILQL+TAKPAIAITH VE AI +D ILD +AG WPI +T+ELAALGL C E+RR+DRPDLK+Q++P LERL++VAD Sbjct: 676 VYSLGVVILQLITAKPAIAITHMVEEAIGDDAEFMAILDKKAGSWPISDTRELAALGLCCTEMRRRDRPDLKDQIIPALERLRKVAD 762
BLAST of CX296749 vs. ExPASy Swiss-Prot
Match: PUB53_ARATH (Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana GN=PUB53 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.304e-26 Identity = 56/89 (62.92%), Postives = 75/89 (84.27%), Query Frame = 3 Query: 18 VYAYGMVILQLLTAKPAIAITHKVETAID---EDNLAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLKEVAD 275 VYA+GM+ILQLLT + A+A+T+ VETA++ +D L +ILD +AG+WPI+ET++LAAL L C ELR KDRPDL++Q+LPVLE LK+VAD Sbjct: 648 VYAFGMIILQLLTGQQAMALTYTVETAMENNNDDELIQILDEKAGNWPIEETRQLAALALQCTELRSKDRPDLEDQILPVLESLKKVAD 736
BLAST of CX296749 vs. ExPASy Swiss-Prot
Match: PUB51_ARATH (U-box domain-containing protein 51 OS=Arabidopsis thaliana GN=PUB51 PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 3.824e-23 Identity = 47/87 (54.02%), Postives = 67/87 (77.01%), Query Frame = 3 Query: 18 VYAYGMVILQLLTAKPAIAITHKVETAIDEDN--LAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLKEVA 272 +YA+G+++LQL+TA+ A+ + H +E A+ + EILD AGDWP+KE KE+ +GL CAE+R++DRPDL ++LPVLERLKEVA Sbjct: 621 IYAFGIILLQLVTARSAMGLAHSIEKALRDQTGKFTEILDKTAGDWPVKEAKEMVMIGLRCAEMRKRDRPDLGKEILPVLERLKEVA 707
BLAST of CX296749 vs. ExPASy Swiss-Prot
Match: PUB34_ARATH (U-box domain-containing protein 34 OS=Arabidopsis thaliana GN=PUB34 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.776e-20 Identity = 46/86 (53.49%), Postives = 63/86 (73.26%), Query Frame = 3 Query: 18 VYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLKEVAD 275 +YA+G++ILQLLTA+ I VE A+ + L E+LD DWP+ ET+ELA +GL CAE R +DRPDLK++V+PVL+RL E A+ Sbjct: 628 LYAFGIIILQLLTARNPSGIVPAVENAVKKGTLTEMLDKSVTDWPLAETEELARIGLKCAEFRCRDRPDLKSEVIPVLKRLVETAN 713
BLAST of CX296749 vs. ExPASy Swiss-Prot
Match: PUB33_ARATH (U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 1.115e-14 Identity = 35/82 (42.68%), Postives = 58/82 (70.73%), Query Frame = 3 Query: 18 VYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLK 263 VY++G+++L+LLT +PA+ I+++V+ A+D L ++LD AGDWP + ++LA L L C E ++RPDL +V VLE ++ Sbjct: 663 VYSFGIILLRLLTGRPALRISNEVKYALDNGTLNDLLDPLAGDWPFVQAEQLARLALRCCETVSENRPDLGTEVWRVLEPMR 744
BLAST of CX296749 vs. ExPASy Swiss-Prot
Match: PUB32_ARATH (U-box domain-containing protein 32 OS=Arabidopsis thaliana GN=PUB32 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.686e-13 Identity = 33/82 (40.24%), Postives = 54/82 (65.85%), Query Frame = 3 Query: 18 VYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLK 263 +YA+G+++LQLLT +P I V+ A++ DN++ +LD AGDWP+ K+LA + + C + +RPDL VL ++R+K Sbjct: 634 IYAFGIILLQLLTRRPVSGILRDVKCALENDNISAVLDNSAGDWPVARGKKLANVAIRCCKKNPMNRPDLA-VVLRFIDRMK 714 The following BLAST results are available for this feature:
BLAST of CX296749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296749 ID=CX296749; Name=CX296749; organism=Citrus clementina; type=EST; length=277bpback to top |