CX296823

Overview
NameCX296823
Unique NameCX296823
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length381
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 7.749e-48
Identity = 87/124 (70.16%), Postives = 109/124 (87.90%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFE 373
            +E++GAL YLHSAAS PIYHRDIK+ NILLD++ RAKVSDFGTSRSV +DQTHLTT+V GTFGYVDPEYFQSS+FTEKSDVYSFGVVLVE+LTG+KP   + ++E++ L  +F++A+ ENR+ +
Sbjct:  520 IEIAGALSYLHSAASFPIYHRDIKTTNILLDERNRAKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTEKSDVYSFGVVLVELLTGEKPSSRVRSEENRGLAAHFVEAVKENRVLD 643          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 5.022e-47
Identity = 85/124 (68.55%), Postives = 108/124 (87.10%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFE 373
            VE++GAL YLHSAAS P+YHRD+K+ NILLD+KYRAKVSDFGTSRS+ VDQTHLTT V GTFGY+DPEYFQ+SQFT+KSDVYSFGVVLVE++TG+KP   +  +E++ LV +F +A+ +NR+ +
Sbjct:  525 VEIAGALAYLHSAASTPVYHRDVKTTNILLDEKYRAKVSDFGTSRSINVDQTHLTTLVAGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELITGEKPFSVMRPEENRGLVSHFNEAMKQNRVLD 648          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 1.119e-46
Identity = 85/126 (67.46%), Postives = 108/126 (85.71%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 379
            +E++GAL Y+HSAAS PIYHRDIK+ NILLD+KY AKVSDFGTSRSV +DQTHLTT V GTFGY+DPEYF SSQ+T+KSDVYSFGVVLVE++TG+KP+  I ++E + L  +FL+A+ ENR+ + +
Sbjct:  536 IEIAGALTYMHSAASFPIYHRDIKTTNILLDEKYGAKVSDFGTSRSVTIDQTHLTTMVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKPLSRIRSEEGRGLATHFLEAMKENRVIDII 661          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 2.493e-46
Identity = 84/126 (66.67%), Postives = 108/126 (85.71%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 379
            +E++GAL Y+HSAAS PI+HRDIK+ NILLD+KYRAKVSDFGTSRSV +DQTHLTT V GTFGY+DPEYF SSQ+T KSDVYSFGVVLVE++TG+KP+  + ++E + L  +FL+A+ ENR+ + +
Sbjct:  533 IEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVSDFGTSRSVTLDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPLSRVRSEEGRGLATHFLEAMKENRVIDII 658          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 4.252e-46
Identity = 83/124 (66.94%), Postives = 105/124 (84.68%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFE 373
            +E++GAL YLHSAAS PIYHRDIK+ NILLD+KY+ KVSDFGTSRSV +DQTHLTT+V GTFGYVDPEYFQSS+FT+KSDVYSFGVVLVE++TG+ P   + ++E++    +F+ A+ ENR  +
Sbjct:  528 IEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTDKSDVYSFGVVLVELITGKNPSSRVQSEENRGFAAHFVAAVKENRFLD 651          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 5.553e-46
Identity = 84/126 (66.67%), Postives = 108/126 (85.71%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 379
            ++++GAL YLHS+AS PIYHRD+KS NI+LD+KYRAKVSDFGTSR+V VD THLTT V GT GY+DPEYFQSSQFT+KSDVYSFGVVLVE++TG+K I  + + E+++L  YF+ A+ EN+LF+ +
Sbjct:  552 IDIAGALSYLHSSASSPIYHRDVKSTNIMLDEKYRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLVELITGEKSISFLRSQENRTLATYFILAMKENKLFDII 677          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 9.472e-46
Identity = 85/126 (67.46%), Postives = 105/126 (83.33%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 379
            VE++GAL Y+HSAAS PI+HRDIK+ NILLD+KYRAK+SDFGTSRSV  DQTHLTT V GTFGY+DPEYF SSQ+T KSDVYSFGVVLVE++TG+KP+  + ++E   L  YFL+A+ ENR  + +
Sbjct:  532 VEIAGALSYMHSAASFPIFHRDIKTTNILLDEKYRAKISDFGTSRSVATDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPMSRVRSEEGIGLATYFLEAMKENRAVDII 657          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 5.197e-44
Identity = 84/126 (66.67%), Postives = 104/126 (82.54%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 379
            V+++GAL YLHSAAS PIYHRDIKS NI+LD+K+RAKVSDFGTSR+V VD THLTT V GT GY+DPEYFQSSQFT+KSDVYSFGVVL E++TG+K +  + + E ++L  YF  A+ ENRL + +
Sbjct:  538 VDIAGALSYLHSAASSPIYHRDIKSTNIMLDEKHRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLAELITGEKSVSFLRSQEYRTLATYFTLAMKENRLSDII 663          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 1.512e-43
Identity = 86/127 (67.72%), Postives = 101/127 (79.53%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAIN-TDEDKSLVGYFLQAINENRLFEAL 379
            V++SGA  YLH+AA  PIYHRDIKS NILLD+KYRAKVSDFGTSRSV +D TH TT + GT GYVDPEY+ SS FTEKSDVYSFGVVLVE++TG+KP+  ++ T E   L  YF  A+ ENRLFE +
Sbjct:  558 VDISGAFSYLHTAACSPIYHRDIKSTNILLDEKYRAKVSDFGTSRSVSIDHTHWTTVISGTVGYVDPEYYGSSHFTEKSDVYSFGVVLVELITGEKPVITLSETQEITGLADYFRLAMRENRLFEII 684          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 1.512e-43
Identity = 84/127 (66.14%), Postives = 103/127 (81.10%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAI-NTDEDKSLVGYFLQAINENRLFEAL 379
            V+++GAL YLHSAAS PIYHRDIKS NILLD+KYR KVSDFGTSRSV +D TH TT + GT GYVDPEY+ SSQ+T+KSDVYSFGVVLVE++TG+KP+  + N+ E + L  +F  A+ ENR FE +
Sbjct:  555 VDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRTKVSDFGTSRSVTIDHTHWTTVISGTVGYVDPEYYGSSQYTDKSDVYSFGVVLVELITGEKPVITVSNSQEIRGLADHFRVAMKENRFFEIM 681          
The following BLAST results are available for this feature:
BLAST of CX296823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
WAKLB_ARATH7.749e-4870.16Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
WAKLI_ARATH5.022e-4768.55Wall-associated receptor kinase-like 22 OS=Arabido... [more]
WAKLE_ARATH1.119e-4667.46Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
WAKLA_ARATH2.493e-4666.67Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
WAKLD_ARATH4.252e-4666.94Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
WAKLH_ARATH5.553e-4666.67Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
WAKLC_ARATH9.472e-4667.46Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
WAKLJ_ARATH5.197e-4466.67Wall-associated receptor kinase-like 10 OS=Arabido... [more]
WAKLL_ARATH1.512e-4367.72Putative wall-associated receptor kinase-like 13 O... [more]
WAKLK_ARATH1.512e-4366.14Putative wall-associated receptor kinase-like 11 O... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05803C02SK FerrChloL1 Citrus clementina cDNA clone C05803C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296823 ID=CX296823; Name=CX296823; organism=Citrus clementina; type=EST; length=381bp
TGTAGAAGTTTCAGGTGCTCTTTTCTACTTGCATTCAGCTGCTTCCATCC
CTATTTATCATCGAGACATCAAGTCCGCAAACATACTTTTGGACGATAAA
TATCGAGCCAAAGTTTCGGATTTTGGAACTTCAAGATCTGTTATGGTTGA
TCAAACTCATTTGACCACAAAAGTTCAAGGAACTTTTGGATACGTAGATC
CAGAGTATTTTCAGTCAAGTCAATTCACTGAAAAAAGTGATGTTTATAGT
TTTGGAGTAGTTCTTGTTGAGATTTTAACTGGACAGAAACCTATTCGTGC
AATCAACACTGATGAAGACAAAAGTTTAGTGGGATATTTTCTCCAAGCAA
TTAACGAGAACCGTTTGTTTGAAGCCCTTGA
back to top