CX297494
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX297494 vs. ExPASy Swiss-Prot
Match: DGDG1_LOTJA (Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Lotus japonicus GN=DGD1 PE=2 SV=1) HSP 1 Score: 384.8 bits (987), Expect = 1.880e-106 Identity = 180/204 (88.24%), Postives = 194/204 (95.10%), Query Frame = 1 Query: 7 MTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYP-NVTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPKSVICNVHGVNPKFLQIGEKVATDRE 615 MTGTAVNPLFRAAYL+++E+Q VTLLVPWLCKSDQELVYP N+TF SPEEQE Y+RNWLEER+GFKADFKISFYPGKFS+ RRSIIPAGDT+QFIPSKDADIAILEEPEHLNWYHHG RWTDKFNHVVG+VHTNYLEYIKREKNGALQAF VKHINNWV RAYCDKVLRLSAATQDLPKSV+CNVHGVNPKFL+IGE +A +RE Sbjct: 327 MTGTAVNPLFRAAYLSQSEKQKVTLLVPWLCKSDQELVYPSNLTFTSPEEQEGYIRNWLEERIGFKADFKISFYPGKFSQARRSIIPAGDTAQFIPSKDADIAILEEPEHLNWYHHGTRWTDKFNHVVGIVHTNYLEYIKREKNGALQAFLVKHINNWVARAYCDKVLRLSAATQDLPKSVVCNVHGVNPKFLKIGESIAAERE 530
BLAST of CX297494 vs. ExPASy Swiss-Prot
Match: DGDG1_SOYBN (Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Glycine max GN=DGD1 PE=2 SV=1) HSP 1 Score: 383.645 bits (984), Expect = 4.188e-106 Identity = 181/204 (88.73%), Postives = 195/204 (95.59%), Query Frame = 1 Query: 7 MTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYP-NVTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPKSVICNVHGVNPKFLQIGEKVATDRE 615 MTGTAVNPLFRAAYL+++ +Q VTLLVPWLCKSDQELVYP N+TF SPEEQE Y+R+WLEER+GFKADFKISFYPGKFS+ RRSIIPAGDTSQFIPS+DADIAILEEPEHLNWYHHGKRWTDKFNHVVG+VHTNYLEYIKREKNGALQAF VKHINNWVTRAYC KVLRLSAATQDLPKSVICNVHGVNPKFL+IGEK+A +RE Sbjct: 324 MTGTAVNPLFRAAYLSQSAKQKVTLLVPWLCKSDQELVYPSNLTFTSPEEQEAYIRSWLEERIGFKADFKISFYPGKFSEARRSIIPAGDTSQFIPSRDADIAILEEPEHLNWYHHGKRWTDKFNHVVGIVHTNYLEYIKREKNGALQAFLVKHINNWVTRAYCHKVLRLSAATQDLPKSVICNVHGVNPKFLKIGEKIAAERE 527
BLAST of CX297494 vs. ExPASy Swiss-Prot
Match: DGDG1_ARATH (Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Arabidopsis thaliana GN=DGD1 PE=1 SV=1) HSP 1 Score: 382.489 bits (981), Expect = 9.331e-106 Identity = 179/205 (87.32%), Postives = 194/205 (94.63%), Query Frame = 1 Query: 7 MTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPN-VTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPKSVICNVHGVNPKFLQIGEKVATDREQ 618 MTGTAVNPLFRAAYLAK +Q+VTL+VPWLC+SDQELVYPN +TF SPEEQE+Y+R WLEER+GFKADFKISFYPGKFSKERRSI PAGDTSQFI SKDADIAILEEPEHLNWY+HGKRWTDKFNHVVG+VHTNYLEYIKREKNGALQAFFV H+NNWVTRAYCDKVLRLSAATQDLPKSV+CNVHGVNPKFL IGEK+A +R + Sbjct: 357 MTGTAVNPLFRAAYLAKAAKQSVTLVVPWLCESDQELVYPNNLTFSSPEEQESYIRKWLEERIGFKADFKISFYPGKFSKERRSIFPAGDTSQFISSKDADIAILEEPEHLNWYYHGKRWTDKFNHVVGIVHTNYLEYIKREKNGALQAFFVNHVNNWVTRAYCDKVLRLSAATQDLPKSVVCNVHGVNPKFLMIGEKIAEERSR 561
BLAST of CX297494 vs. ExPASy Swiss-Prot
Match: DGDG2_SOYBN (Digalactosyldiacylglycerol synthase 2, chloroplastic OS=Glycine max GN=DGD2 PE=2 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 3.023e-80 Identity = 134/198 (67.68%), Postives = 162/198 (81.82%), Query Frame = 1 Query: 7 MTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPN-VTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPKSVICNVHGVNPKFLQIGEK 597 +TGTAVNPLFRAAYLAK+ +++VTL++PWL DQ LVYPN +TF SP E E Y+ WLEERVGF + F I FYPGKFS+++RSI+ GD S+ IP K ADIA+LEEPEHL WYHHGKRW KF V+G++HTNYLEY+KREKNG +QAF +K++NNWV YC KV+RLSAATQD S+ICNVHGVNPKFL+IG+K Sbjct: 18 LTGTAVNPLFRAAYLAKSGERDVTLVIPWLSLKDQRLVYPNNITFASPSEHEKYICQWLEERVGFTSGFSIQFYPGKFSRDKRSILAVGDISEIIPDKVADIAVLEEPEHLTWYHHGKRWKTKFRLVIGIIHTNYLEYVKREKNGVMQAFLLKYLNNWVVSIYCHKVIRLSAATQDYTGSIICNVHGVNPKFLEIGKK 215
BLAST of CX297494 vs. ExPASy Swiss-Prot
Match: DGDG2_LOTJA (Digalactosyldiacylglycerol synthase 2, chloroplastic OS=Lotus japonicus GN=DGD2 PE=2 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 3.948e-80 Identity = 132/198 (66.67%), Postives = 163/198 (82.32%), Query Frame = 1 Query: 7 MTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPN-VTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPKSVICNVHGVNPKFLQIGEK 597 +TGTAVNPLFRAAYL+K +++VTL++PWL DQ LVYPN +TF SP E E Y+R WLEERVGF + F I FYPGKFS+++RSI+ GD S+ IP K+ADIA+LEEPEHL W+HHGKRW KF V+G++HTNYLEY+KREKNG +QAF +K++NNWV YC KV+RLSAATQD S++CNVHGVNPKFL+IG+K Sbjct: 18 LTGTAVNPLFRAAYLSKDGERDVTLVIPWLSLKDQALVYPNNITFASPSEHEKYIRQWLEERVGFTSGFSIKFYPGKFSRDKRSILAVGDISEVIPDKEADIAVLEEPEHLTWFHHGKRWKTKFRLVIGIIHTNYLEYVKREKNGQMQAFLLKYLNNWVVGIYCHKVIRLSAATQDYSGSIVCNVHGVNPKFLEIGKK 215
BLAST of CX297494 vs. ExPASy Swiss-Prot
Match: DGDG2_ARATH (Digalactosyldiacylglycerol synthase 2, chloroplastic OS=Arabidopsis thaliana GN=DGD2 PE=2 SV=1) HSP 1 Score: 290.041 bits (741), Expect = 6.302e-78 Identity = 128/196 (65.31%), Postives = 163/196 (83.16%), Query Frame = 1 Query: 7 MTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPN-VTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPKSVICNVHGVNPKFLQIG 591 +TGTAVNPLFRAAYLA ++ VTL++PWL Q+LVYPN +TF SP EQE Y+R WLEERV F+ F+I FYPGKF+ ++RSI+P GD S IP ++ADIA+LEEPEHL W+HHG++W KFN+V+G+VHTNYLEY+KREK G ++AFF+K++N+WV YC KV+RLSAATQ+ PKS++CNVHGVNPKFL+IG Sbjct: 20 LTGTAVNPLFRAAYLANDGERRVTLVIPWLTLKHQKLVYPNSITFSSPSEQEAYVRQWLEERVSFRLAFEIRFYPGKFAIDKRSILPVGDISDAIPDEEADIAVLEEPEHLTWFHHGQKWKTKFNYVIGIVHTNYLEYVKREKQGRVKAFFLKYLNSWVVGIYCHKVIRLSAATQEYPKSIVCNVHGVNPKFLEIG 215 The following BLAST results are available for this feature:
BLAST of CX297494 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX297494 ID=CX297494; Name=CX297494; organism=Citrus clementina; type=EST; length=620bpback to top |