CX297675
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX297675 vs. ExPASy Swiss-Prot
Match: AMYB_HORVU (Beta-amylase OS=Hordeum vulgare GN=BMY1 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 2.457e-26 Identity = 53/97 (54.64%), Postives = 71/97 (73.20%), Query Frame = 1 Query: 58 KGKGVPVFVMMPLDSVTMSNTVNRKKAIDASLRALKSAGVEGVMMDVWWGLVERDQPGHYNWGGYSDLLEMAKRHGLKVQAVMSFHQCGGNVGDSVS 348 KG V V+VM+PLD+V+++N + + A LR L AGV+GVM+DVWWGLVE P Y+W Y L E+ ++ GLK+QA+MSFHQCGGNVGD+V+ Sbjct: 6 KGNYVQVYVMLPLDAVSVNNRFEKGDELRAQLRKLVEAGVDGVMVDVWWGLVEGKGPKAYDWSAYKQLFELVQKAGLKLQAIMSFHQCGGNVGDAVN 102
BLAST of CX297675 vs. ExPASy Swiss-Prot
Match: AMYB_HORSP (Beta-amylase OS=Hordeum spontaneum GN=BMY1 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 2.457e-26 Identity = 53/97 (54.64%), Postives = 71/97 (73.20%), Query Frame = 1 Query: 58 KGKGVPVFVMMPLDSVTMSNTVNRKKAIDASLRALKSAGVEGVMMDVWWGLVERDQPGHYNWGGYSDLLEMAKRHGLKVQAVMSFHQCGGNVGDSVS 348 KG V V+VM+PLD+V+++N + + A LR L AGV+GVM+DVWWGLVE P Y+W Y L E+ ++ GLK+QA+MSFHQCGGNVGD+V+ Sbjct: 6 KGNYVQVYVMLPLDAVSVNNRFEKGDELRAQLRKLVEAGVDGVMVDVWWGLVEGKGPKAYDWSAYKQLFELVQKAGLKLQAIMSFHQCGGNVGDAVN 102
BLAST of CX297675 vs. ExPASy Swiss-Prot
Match: AMYB_MAIZE (Beta-amylase OS=Zea mays GN=BMY1 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 3.923e-24 Identity = 48/93 (51.61%), Postives = 66/93 (70.97%), Query Frame = 1 Query: 70 VPVFVMMPLDSVTMSNTVNRKKAIDASLRALKSAGVEGVMMDVWWGLVERDQPGHYNWGGYSDLLEMAKRHGLKVQAVMSFHQCGGNVGDSVS 348 V V+VM+PLD +T+ NT ++ A L+ L AG +GVM+DVWWGLVE +PG Y+W Y + ++ + GLK+QA+MS HQCGGNVGD V+ Sbjct: 10 VQVYVMLPLDVITVDNTFEKEDETRAQLKKLTEAGADGVMIDVWWGLVEGKEPGVYDWSAYRQVFKLVQEAGLKLQAIMSCHQCGGNVGDVVN 102
BLAST of CX297675 vs. ExPASy Swiss-Prot
Match: AMYB_IPOBA (Beta-amylase OS=Ipomoea batatas GN=BMY1 PE=1 SV=4) HSP 1 Score: 109.768 bits (273), Expect = 6.692e-24 Identity = 46/100 (46.00%), Postives = 68/100 (68.00%), Query Frame = 1 Query: 46 GLQEKGKGVPVFVMMPLDSVTMSNTVNRKKAIDASLRALKSAGVEGVMMDVWWGLVERDQPGHYNWGGYSDLLEMAKRHGLKVQAVMSFHQCGGNVGDSV 345 G+ G V ++VM+PL V N K+ ++ L+ +K+ G +GVM+DVWWG++E P Y+W Y +L ++ K+ GLK+QA+MSFHQCGGNVGD+V Sbjct: 6 GVMPIGNYVSLYVMLPLGVVNADNVFPDKEKVEDELKQVKAGGCDGVMVDVWWGIIEAKGPKQYDWSAYRELFQLVKKCGLKIQAIMSFHQCGGNVGDAV 105
BLAST of CX297675 vs. ExPASy Swiss-Prot
Match: AMYB_VIGUN (Beta-amylase OS=Vigna unguiculata GN=BMY1 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.491e-23 Identity = 46/93 (49.46%), Postives = 66/93 (70.97%), Query Frame = 1 Query: 70 VPVFVMMPLDSVTMSNTVNRKKAIDASLRALKSAGVEGVMMDVWWGLVERDQPGHYNWGGYSDLLEMAKRHGLKVQAVMSFHQCGGNVGDSVS 348 VPV+VM+PL V+++N + + L L+ AGV+GVM+DVWWG++E+ P Y+W Y L ++ + GLK+QA+MSFHQCGGNVGD V+ Sbjct: 13 VPVYVMLPLGVVSVNNVFEDPEGLKEQLVQLREAGVDGVMVDVWWGIIEQKGPKQYDWSAYKSLFQLVQECGLKLQAIMSFHQCGGNVGDVVN 105
BLAST of CX297675 vs. ExPASy Swiss-Prot
Match: AMYB_WHEAT (Beta-amylase OS=Triticum aestivum GN=BMY1 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.947e-23 Identity = 49/93 (52.69%), Postives = 64/93 (68.82%), Query Frame = 1 Query: 70 VPVFVMMPLDSVTMSNTVNRKKAIDASLRALKSAGVEGVMMDVWWGLVERDQPGHYNWGGYSDLLEMAKRHGLKVQAVMSFHQCGGNVGDSVS 348 V V+VM+PLD V++ N + I A L+ L AGV+GVM+DVWWGLVE P Y+W Y + ++ GLK+QA+MSFHQCGGNVGD V+ Sbjct: 10 VQVYVMLPLDVVSVDNKFEKGDEIRAQLKKLTEAGVDGVMIDVWWGLVEGKGPKAYDWSAYKQVFDLVHEAGLKLQAIMSFHQCGGNVGDVVN 102
BLAST of CX297675 vs. ExPASy Swiss-Prot
Match: AMYB_MEDSA (Beta-amylase OS=Medicago sativa GN=BMY1 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.947e-23 Identity = 45/93 (48.39%), Postives = 66/93 (70.97%), Query Frame = 1 Query: 70 VPVFVMMPLDSVTMSNTVNRKKAIDASLRALKSAGVEGVMMDVWWGLVERDQPGHYNWGGYSDLLEMAKRHGLKVQAVMSFHQCGGNVGDSVS 348 VPV+VM+PL + ++N + L L++AGV+GVM+DVWWG++E+ P Y+W Y L ++ ++ GLK+QA+MSFHQCGGNVGD V+ Sbjct: 13 VPVYVMLPLGVINVNNVFEDPDGLKEQLVQLRAAGVDGVMIDVWWGIIEQKGPKEYDWSAYKSLFQLVQKCGLKLQAIMSFHQCGGNVGDVVN 105
BLAST of CX297675 vs. ExPASy Swiss-Prot
Match: AMYB_TRIRP (Beta-amylase OS=Trifolium repens GN=BMY1 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 3.321e-23 Identity = 45/93 (48.39%), Postives = 65/93 (69.89%), Query Frame = 1 Query: 70 VPVFVMMPLDSVTMSNTVNRKKAIDASLRALKSAGVEGVMMDVWWGLVERDQPGHYNWGGYSDLLEMAKRHGLKVQAVMSFHQCGGNVGDSVS 348 VPV+VM+PL + ++N + L L++AGV+GVM+DVWWG++E+ P Y+W Y L ++ + GLK+QA+MSFHQCGGNVGD V+ Sbjct: 13 VPVYVMLPLGVINVNNVFEDPDGLKEQLVQLRAAGVDGVMVDVWWGIIEQKGPKEYDWSAYKSLFQLVQECGLKLQAIMSFHQCGGNVGDVVT 105
BLAST of CX297675 vs. ExPASy Swiss-Prot
Match: AMYB_ARATH (Beta-amylase OS=Arabidopsis thaliana GN=BMY1 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 5.665e-23 Identity = 48/94 (51.06%), Postives = 65/94 (69.15%), Query Frame = 1 Query: 70 VPVFVMMPLDSVTMSNTVNRKKAIDASLRALKS-AGVEGVMMDVWWGLVERDQPGHYNWGGYSDLLEMAKRHGLKVQAVMSFHQCGGNVGDSVS 348 VPV+VM+PL V + N + ++ L+ LK AGV+GVM+DVWWG++E P Y+W Y L ++ R GLK+QA+MSFHQCGGNVGD V+ Sbjct: 14 VPVYVMLPLGVVNVENVFADPETLETQLKRLKEEAGVDGVMVDVWWGIIESKGPKQYDWTAYKTLFQLIARLGLKIQAIMSFHQCGGNVGDIVT 107
BLAST of CX297675 vs. ExPASy Swiss-Prot
Match: AMYB_SOYBN (Beta-amylase OS=Glycine max GN=BMY1 PE=1 SV=3) HSP 1 Score: 103.219 bits (256), Expect = 6.263e-22 Identity = 45/93 (48.39%), Postives = 62/93 (66.67%), Query Frame = 1 Query: 70 VPVFVMMPLDSVTMSNTVNRKKAIDASLRALKSAGVEGVMMDVWWGLVERDQPGHYNWGGYSDLLEMAKRHGLKVQAVMSFHQCGGNVGDSVS 348 VPV+VM+PL V + N + L L++AGV+GVM+DVWWG++E P Y+W Y L ++ + GL +QA+MSFHQCGGNVGD V+ Sbjct: 13 VPVYVMLPLGVVNVDNVFEDPDGLKEQLLQLRAAGVDGVMVDVWWGIIELKGPKQYDWRAYRSLFQLVQECGLTLQAIMSFHQCGGNVGDIVN 105 The following BLAST results are available for this feature:
BLAST of CX297675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CX297675 ID=CX297675; Name=CX297675; organism=Citrus clementina; type=EST; length=484bpback to top |