CX298468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_RHOCS (50S ribosomal protein L20 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=rplT PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.332e-32 Identity = 64/102 (62.75%), Postives = 82/102 (80.39%), Query Frame = -3 Query: 320 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNA 625 K++ KLAKG+RGR+ C RIA ERVEKAL+Y+YRDRRN+KRD R LWIQRINAG R HG+ Y FMHGL + I+++RKVLS+++ EP SFKALV+ ++ A Sbjct: 15 KKVLKLAKGYRGRSSKCYRIALERVEKALRYAYRDRRNRKRDFRGLWIQRINAGARLHGLTYSKFMHGLKRAGIEVDRKVLSDIAAREPESFKALVEQAQKA 116
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_EHRCJ (50S ribosomal protein L20 OS=Ehrlichia canis (strain Jake) GN=rplT PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.860e-32 Identity = 64/106 (60.38%), Postives = 84/106 (79.25%), Query Frame = -3 Query: 320 RMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNA 637 R K++ KLAKG+RGR+KNC RIA +RVEKALQY+YRDRRN+KR RSLWI RINA RQHG+ Y +F+HGL NI LNRKVL++++++ +FK +VDI++ A Sbjct: 11 RARHKKVIKLAKGYRGRSKNCYRIALQRVEKALQYAYRDRRNRKRFFRSLWIMRINAAARQHGLLYSDFIHGLSLANITLNRKVLADMAVNNQDNFKQIVDITKEA 116
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_EHRCR (50S ribosomal protein L20 OS=Ehrlichia chaffeensis (strain Arkansas) GN=rplT PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.500e-31 Identity = 62/106 (58.49%), Postives = 82/106 (77.36%), Query Frame = -3 Query: 320 RMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNA 637 R K++ KLAKG+RGR+KNC RIA +RVEKALQY+YRDRRN+KR RSLWI RINA RQHG+ Y +F+HGL N+ LNRKVL++++++ FK +VD+ + A Sbjct: 11 RARHKKVIKLAKGYRGRSKNCYRIALQRVEKALQYAYRDRRNRKRFFRSLWIMRINAAVRQHGLLYSDFIHGLSLANVTLNRKVLADMAVNHKDHFKQIVDLIKEA 116
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_EHRRW (50S ribosomal protein L20 OS=Ehrlichia ruminantium (strain Welgevonden) GN=rplT PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.796e-31 Identity = 60/106 (56.60%), Postives = 84/106 (79.25%), Query Frame = -3 Query: 320 RMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNA 637 R K++ KLAKG+RGR+KNC R+A +RVEKALQY+YRDRRN+KR RSLWI RINA RQ+G+ Y +F++GL NI LNRK+L+++++H +FK +VD+++ A Sbjct: 11 RARHKKVIKLAKGYRGRSKNCYRVALQRVEKALQYAYRDRRNRKRFFRSLWIMRINAAVRQYGLLYSDFIYGLSLANITLNRKILADMAVHNKDNFKQIVDLTKEA 116
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_EHRRG (50S ribosomal protein L20 OS=Ehrlichia ruminantium (strain Gardel) GN=rplT PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.796e-31 Identity = 60/106 (56.60%), Postives = 84/106 (79.25%), Query Frame = -3 Query: 320 RMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNA 637 R K++ KLAKG+RGR+KNC R+A +RVEKALQY+YRDRRN+KR RSLWI RINA RQ+G+ Y +F++GL NI LNRK+L+++++H +FK +VD+++ A Sbjct: 11 RARHKKVIKLAKGYRGRSKNCYRVALQRVEKALQYAYRDRRNRKRFFRSLWIMRINAAVRQYGLLYSDFIYGLSLANITLNRKILADMAVHNKDNFKQIVDLTKEA 116
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_MESSB (50S ribosomal protein L20 OS=Mesorhizobium sp. (strain BNC1) GN=rplT PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.722e-30 Identity = 61/108 (56.48%), Postives = 85/108 (78.70%), Query Frame = -3 Query: 302 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNAFPGNKN 625 K++ K AKGF GR KN IRIA++ VEK+LQY+YRDR+N+KR+ R+LWIQRINA TR+HG+ YG F+ GL K I+++RKVL+++++HEP +F ALV S+ + KN Sbjct: 15 KKVLKAAKGFYGRRKNTIRIAKQAVEKSLQYAYRDRKNRKRNFRALWIQRINAATREHGLTYGRFIDGLNKAGIEIDRKVLADMAVHEPQAFAALVAKSKASLEYLKN 122
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_WOLPP (50S ribosomal protein L20 OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=rplT PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.862e-30 Identity = 59/97 (60.82%), Postives = 76/97 (78.35%), Query Frame = -3 Query: 335 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVD 625 K++ KLAKG+RGRAKNC RIA +RVEKALQY+YRDRRN+KRD R LWI RINA R+HG+ YG FMHGL + LNRK+L+E++++ F L++ Sbjct: 15 KKVLKLAKGYRGRAKNCYRIALQRVEKALQYAYRDRRNRKRDFRGLWIIRINAAAREHGLTYGRFMHGLKLVGVDLNRKILAEMAVNHKDDFAKLIE 111
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_RHILO (50S ribosomal protein L20 OS=Rhizobium loti GN=rplT PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.414e-29 Identity = 60/108 (55.56%), Postives = 83/108 (76.85%), Query Frame = -3 Query: 302 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNAFPGNKN 625 K++ K AKGF GR KN IRIA++ VEK+LQY+YRDR+N+KR R+LWIQRINA T +HG+ YG F+ GL K I+++RK+LS++++HEP +F ALV ++ A KN Sbjct: 15 KKVLKAAKGFYGRRKNTIRIAKQAVEKSLQYAYRDRKNRKRSFRALWIQRINAATHEHGLTYGRFIDGLNKAGIEIDRKILSDMAIHEPQAFAALVAKAKVALEYLKN 122
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_ORITI (50S ribosomal protein L20 OS=Orientia tsutsugamushi (strain Ikeda) GN=rplT PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.414e-29 Identity = 60/109 (55.05%), Postives = 84/109 (77.06%), Query Frame = -3 Query: 320 KRERMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNA 646 K + K+I KLAKG+RGRAKNC RIA ++VEKALQYSYRDRRN+KR R+LWIQRINA RQ+ + Y F++GL + NI ++RKV+++L++H SF LV++++ + Sbjct: 8 KVNKNRHKKILKLAKGYRGRAKNCFRIAIQKVEKALQYSYRDRRNRKRQFRALWIQRINAAVRQYDITYSQFINGLKQANITVDRKVMADLAVHNADSFVHLVELTKKS 116
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_WOLWR (50S ribosomal protein L20 OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=rplT PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.847e-29 Identity = 61/97 (62.89%), Postives = 76/97 (78.35%), Query Frame = -3 Query: 335 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVD 625 K+I KLAKG+RGRAK+C RIA +RVEKALQY+YRDRR +KRD RSLWI RINA R+HG+ YG FMHGL I LNRK+L+E++++ F LV+ Sbjct: 15 KKILKLAKGYRGRAKSCYRIALQRVEKALQYAYRDRRTRKRDFRSLWIIRINAAAREHGLTYGRFMHGLTLAGIDLNRKILAEMAVNYKDDFAKLVE 111 The following BLAST results are available for this feature:
BLAST of CX298468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298468 ID=CX298468; Name=CX298468; organism=Citrus clementina; type=EST; length=714bpback to top |