CX299661
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODF_SOYBN (Superoxide dismutase [Fe], chloroplastic OS=Glycine max GN=SODB PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.660e-25 Identity = 55/68 (80.88%), Postives = 60/68 (88.24%), Query Frame = 3 Query: 6 LLVVSTPNAVNPLVWD-YSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKAPAT 206 L+V+ +PNAVNPLVW Y PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSW++VS RLE AKA T Sbjct: 179 LVVLKSPNAVNPLVWGGYYPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWDAVSSRLEQAKALIT 246
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODF_NICPL (Superoxide dismutase [Fe], chloroplastic (Fragment) OS=Nicotiana plumbaginifolia GN=SODB PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.538e-23 Identity = 50/64 (78.12%), Postives = 57/64 (89.06%), Query Frame = 3 Query: 6 LLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 197 L +V TPNA NPLV Y+PLLTIDVWEHAYYLDFQNRRPDYIS+FM+KLVSWE+VS RL++A A Sbjct: 139 LALVKTPNAENPLVLGYTPLLTIDVWEHAYYLDFQNRRPDYISIFMEKLVSWEAVSSRLKAATA 202
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODF_ARATH (Superoxide dismutase [Fe], chloroplastic OS=Arabidopsis thaliana GN=SODB PE=1 SV=4) HSP 1 Score: 105.145 bits (261), Expect = 2.221e-22 Identity = 51/64 (79.69%), Postives = 53/64 (82.81%), Query Frame = 3 Query: 6 LLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 197 L VV TPNAVNPLV PLLTIDVWEHAYYLDFQNRRPDYI FM LVSWE+VS RLE+AKA Sbjct: 146 LKVVKTPNAVNPLVLGSFPLLTIDVWEHAYYLDFQNRRPDYIKTFMTNLVSWEAVSARLEAAKA 209
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODF_SYNY3 (Superoxide dismutase [Fe] OS=Synechocystis sp. (strain PCC 6803) GN=sodB PE=1 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 1.541e-15 Identity = 37/63 (58.73%), Postives = 48/63 (76.19%), Query Frame = 3 Query: 3 SLLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 191 +L V T NA NP+ +PLLT+DVWEHAYYLD+QNRRPDYI+ F+ KLV+W+ V+ L +A Sbjct: 137 TLKVTKTGNAENPMTAGQTPLLTMDVWEHAYYLDYQNRRPDYIADFLGKLVNWDFVAANLAAA 199
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODF_PLEBO (Superoxide dismutase [Fe] OS=Plectonema boryanum GN=sodB PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.541e-15 Identity = 37/60 (61.67%), Postives = 45/60 (75.00%), Query Frame = 3 Query: 3 SLLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 182 +L V TPNA NPLV PLLT+DVWEHAYYLDFQN RP +I F+D LV+W+ V++ L Sbjct: 138 TLKVTKTPNAENPLVHGQKPLLTLDVWEHAYYLDFQNARPAFIKNFLDNLVNWDFVAQNL 197
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODF_SYNE7 (Superoxide dismutase [Fe] OS=Synechococcus elongatus (strain PCC 7942) GN=sodB PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.858e-15 Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 3 Query: 3 SLLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 197 +L + T NA P+ +PLLTIDVWEHAYYLD+QNRRPDYIS F++KL +W+ S +A A Sbjct: 137 TLKITKTGNADTPIAHGQTPLLTIDVWEHAYYLDYQNRRPDYISTFVEKLANWDFASANYAAAIA 201
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODM_BACHD (Superoxide dismutase [Mn] OS=Bacillus halodurans GN=sodA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.458e-14 Identity = 35/63 (55.56%), Postives = 47/63 (74.60%), Query Frame = 3 Query: 6 LLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 194 L + STPN PL+ +P+L +DVWEHAYYL++QNRRPDYIS F + +V+W+ V+KR AK Sbjct: 141 LEITSTPNQDTPLMEGKTPILGLDVWEHAYYLNYQNRRPDYISAFWN-VVNWDEVAKRYNEAK 202
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODF_RHOCA (Superoxide dismutase [Fe] OS=Rhodobacter capsulatus GN=sodB PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.105e-13 Identity = 31/60 (51.67%), Postives = 46/60 (76.67%), Query Frame = 3 Query: 3 SLLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 182 +L + T N VNPL + + LL DVWEH+YY+DF+N+RP Y++ F+DKLV+WE+V+ R+ Sbjct: 141 ALKITKTENGVNPLCFGQTALLGCDVWEHSYYIDFRNKRPAYLTNFLDKLVNWENVASRM 200
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODM_BACCA (Superoxide dismutase [Mn] OS=Bacillus caldotenax GN=sodA PE=3 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 3.214e-13 Identity = 33/64 (51.56%), Postives = 48/64 (75.00%), Query Frame = 3 Query: 6 LLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 197 L + STPN +P++ +P+L +DVWEHAYYL +QNRRP+YI+ F + +V+W+ V+KR AKA Sbjct: 141 LEITSTPNQDSPIMEGKTPILGLDVWEHAYYLKYQNRRPEYIAAFWN-IVNWDEVAKRYSEAKA 203
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODM_STAS1 (Superoxide dismutase [Mn/Fe] OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=sodA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.198e-13 Identity = 34/64 (53.12%), Postives = 47/64 (73.44%), Query Frame = 3 Query: 3 SLLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 194 +L +V+TPN NPL +P+L +DVWEHAYYL +QN+RPDYIS F + +V+WE V + +AK Sbjct: 137 NLEIVTTPNQDNPLTEGKTPILGLDVWEHAYYLKYQNKRPDYISAFWN-VVNWEKVDELYNAAK 199 The following BLAST results are available for this feature:
BLAST of CX299661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299661 ID=CX299661; Name=CX299661; organism=Citrus clementina; type=EST; length=548bpback to top |