CX299943
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_FLAAN (Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala GN=GDCSH PE=2 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 1.930e-71 Identity = 128/162 (79.01%), Postives = 147/162 (90.74%), Query Frame = 1 Query: 37 MALRMWASSTANALRISCASKTPAFALSRCFSSVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENAAH 522 MALRMWASSTANALR+S A++ LSRCFSSVLDGLKYA+SHEWVKHEGSVAT+GITDHAQDHLGEVVFV+LPE G SV + GFG VESVKATSDVNSPISGE++EVN+KL+ETPGL+NSSPYE+GW+IKVKPS+PS+L+SLM + YTKFCEEE+AAH Sbjct: 1 MALRMWASSTANALRLSSATRPHFSPLSRCFSSVLDGLKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGLINSSPYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDAAH 162
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_FLAPR (Glycine cleavage system H protein, mitochondrial OS=Flaveria pringlei GN=GDCSH PE=2 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 1.251e-70 Identity = 126/162 (77.78%), Postives = 147/162 (90.74%), Query Frame = 1 Query: 37 MALRMWASSTANALRISCASKTPAFALSRCFSSVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENAAH 522 MALR+WASSTANALR+S A++ LSRCFSSVLDGLKYA+SHEWVKHEGSVAT+GITDHAQDHLGEVVFV+LPE G SV + GFG VESVKATSDVNSPISGE++EVN+KL+ETPGL+NSSPYE+GW+IKVKPS+PS+L+SLM + YTKFCEEE++AH Sbjct: 1 MALRIWASSTANALRLSSATRPHFSPLSRCFSSVLDGLKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGLINSSPYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDSAH 162
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_PEA (Glycine cleavage system H protein, mitochondrial OS=Pisum sativum GN=GDCSH PE=1 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 1.634e-70 Identity = 128/165 (77.58%), Postives = 147/165 (89.09%), Query Frame = 1 Query: 37 MALRMWASSTANALRISCASK---TPAFALSRCFSSVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENAAH 522 MALRMWASSTANAL++S +S+ +P F++SRCFS+VLDGLKYA SHEWVKHEGSVAT+GITDHAQDHLGEVVFVELPE G SV +G GFG VESVKATSDVNSPISGEVIEVNT LT PGL+NSSPYE+GW+IK+KP+SP +LESL+ + YTKFCEEE+AAH Sbjct: 1 MALRMWASSTANALKLSSSSRLHLSPTFSISRCFSNVLDGLKYAPSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVNTGLTGKPGLINSSPYEDGWMIKIKPTSPDELESLLGAKEYTKFCEEEDAAH 165
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH2_ARATH (Probable glycine cleavage system H protein 2, mitochondrial OS=Arabidopsis thaliana GN=At1g32470 PE=1 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 3.640e-70 Identity = 130/166 (78.31%), Postives = 151/166 (90.96%), Query Frame = 1 Query: 37 MALRMWASSTANALRISC-ASKT---PAFALSRCFSSVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENAAH 522 MALRMWASSTANAL++S ASK+ PAF++SRCFSSVL+GLKYA+SHEWVKHEGSVAT+GITDHAQDHLGEVVFVELPE +SV + FG VESVKATS++ SPISGEVIEVNTKLTE+PGL+NSSPYE+GW+IKVKPSSP++LE+LM P+ YTKFCEEE+AAH Sbjct: 1 MALRMWASSTANALKLSSSASKSHLLPAFSISRCFSSVLEGLKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEANSSVSKEKSFGAVESVKATSEILSPISGEVIEVNTKLTESPGLINSSPYEDGWMIKVKPSSPAELEALMGPKEYTKFCEEEDAAH 166
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_ORYSJ (Glycine cleavage system H protein, mitochondrial OS=Oryza sativa subsp. japonica GN=GDCSH PE=1 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 8.965e-69 Identity = 124/163 (76.07%), Postives = 146/163 (89.57%), Query Frame = 1 Query: 37 MALRMWASSTANALRISCASKT---PAFALSRCFSSVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENA 516 MALR+WASS ANAL+ISC+ T PA+++SR FS+VLDGLKY+SSHEWVK++GSVAT+GITDHAQ HLGEVVFVELPE GA V QGG FG VESVKATSD+NSPISGEV+EVN KL+ETPGL+NSSPYE+GW+IKVKPSSPS+L++L+DP YTK CEEE+A Sbjct: 1 MALRLWASSAANALKISCSGATRAAPAYSISRYFSTVLDGLKYSSSHEWVKNDGSVATIGITDHAQGHLGEVVFVELPEAGAKVSQGGAFGNVESVKATSDINSPISGEVVEVNDKLSETPGLINSSPYEDGWMIKVKPSSPSELDALLDPAKYTKHCEEEDA 163
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_ORYSI (Glycine cleavage system H protein, mitochondrial OS=Oryza sativa subsp. indica GN=GDCSH PE=2 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 8.965e-69 Identity = 124/163 (76.07%), Postives = 146/163 (89.57%), Query Frame = 1 Query: 37 MALRMWASSTANALRISCASKT---PAFALSRCFSSVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENA 516 MALR+WASS ANAL+ISC+ T PA+++SR FS+VLDGLKY+SSHEWVK++GSVAT+GITDHAQ HLGEVVFVELPE GA V QGG FG VESVKATSD+NSPISGEV+EVN KL+ETPGL+NSSPYE+GW+IKVKPSSPS+L++L+DP YTK CEEE+A Sbjct: 1 MALRLWASSAANALKISCSGATRAAPAYSISRYFSTVLDGLKYSSSHEWVKNDGSVATIGITDHAQGHLGEVVFVELPEAGAKVSQGGAFGNVESVKATSDINSPISGEVVEVNDKLSETPGLINSSPYEDGWMIKVKPSSPSELDALLDPAKYTKHCEEEDA 163
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_FLATR (Glycine cleavage system H protein, mitochondrial OS=Flaveria trinervia GN=GDCSH PE=2 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 3.407e-68 Identity = 126/163 (77.30%), Postives = 143/163 (87.73%), Query Frame = 1 Query: 37 MALRMWASSTANALRISCASKTPAFALSRCFSS--VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENAA 519 MALR+WASSTA ALR+S AS+ L RCFSS VLDGLKYA+SHEWVKHEGSVAT+GITDHAQDHLGEVVFVELPE G SV + GFG VESVKATSDVNSPISGE++EVN+KLT+TPGL+N SPYE+GW+IKVKPS+PS+L+SLM P+ YTKFCEEE AA Sbjct: 1 MALRIWASSTAKALRLSSASRPHFSPLFRCFSSAAVLDGLKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEVGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLTKTPGLINKSPYEDGWMIKVKPSNPSELDSLMGPKEYTKFCEEEGAA 163
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH1_ARATH (Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis thaliana GN=GDCSH PE=1 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 1.431e-66 Identity = 123/165 (74.55%), Postives = 143/165 (86.67%), Query Frame = 1 Query: 37 MALRMWASSTANALRISCA---SKTPAFALSRCFSSVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENAAH 522 MALRMWASSTANAL++S + S F+ SRCFS+VL+GLKYA+SHEWVKHEGSVAT+GIT HAQDHLGEVVFVELPE SV + FG VESVKATS++ SPISGE+IEVN KLTE+PGL+NSSPYE+GW+IKVKPSSP++LESLM P+ YTKFCEEE+AAH Sbjct: 1 MALRMWASSTANALKLSSSVSKSHLSPFSFSRCFSTVLEGLKYANSHEWVKHEGSVATIGITAHAQDHLGEVVFVELPEDNTSVSKEKSFGAVESVKATSEILSPISGEIIEVNKKLTESPGLINSSPYEDGWMIKVKPSSPAELESLMGPKEYTKFCEEEDAAH 165
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_MESCR (Glycine cleavage system H protein, mitochondrial OS=Mesembryanthemum crystallinum GN=GDCSH PE=2 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 1.582e-65 Identity = 123/163 (75.46%), Postives = 142/163 (87.12%), Query Frame = 1 Query: 37 MALRMWASSTANALRISCASKT---PAFALSRCFSSVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENA 516 MALRMWASS ANAL +SCA K+ PA +LSRCFS+VLDGLKYASSHEWVKH GSVAT+GITDHAQ HLG+VVF ELPE GA V G F VESVKATSDVNSPISGE++EVNTKL+++PGL+NSSPYEEGW++KVKPS+P++LESLM + YTKFCEEE+A Sbjct: 1 MALRMWASSAANALGVSCAPKSHLLPALSLSRCFSTVLDGLKYASSHEWVKHGGSVATIGITDHAQGHLGDVVFAELPEGGA-VSAGKPFASVESVKATSDVNSPISGEIVEVNTKLSDSPGLLNSSPYEEGWMVKVKPSNPAELESLMGSKEYTKFCEEEDA 162
BLAST of CX299943 vs. ExPASy Swiss-Prot
Match: GCSH_FLAPU (Glycine cleavage system H protein, mitochondrial (Fragment) OS=Flaveria pubescens GN=GDCSH PE=2 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 1.582e-65 Identity = 120/152 (78.95%), Postives = 137/152 (90.13%), Query Frame = 1 Query: 37 MALRMWASSTANALRISCASKTPAFALSRCFSSVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYT 492 MALRMWASSTANALR+S A++ LSRCFSSVLDGLKYA+SHEWVKHEGSVATVGITDHAQDHLGEVVFV+LPE G SV + GFG VESVKATSDVNSPISGE++EVN+KL+ETPGL+NSSPYE+GW+IKVKPS+PS+L+SLM + YT Sbjct: 1 MALRMWASSTANALRLSSATRPHYSPLSRCFSSVLDGLKYANSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGLINSSPYEDGWMIKVKPSNPSELDSLMGAKEYT 152 The following BLAST results are available for this feature:
BLAST of CX299943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 461
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299943 ID=CX299943; Name=CX299943; organism=Citrus clementina; type=EST; length=610bpback to top |