CX299956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299956 vs. ExPASy Swiss-Prot
Match: YG41_SCHPO (Uncharacterized RNA-binding protein C23E6.01c OS=Schizosaccharomyces pombe GN=SPBC23E6.01c PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.112e-16 Identity = 38/62 (61.29%), Postives = 48/62 (77.42%), Query Frame = 1 Query: 4 VSDEDLREPFSQFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGRN 189 VS+E+L+ F FGEI+ VKIP GKGCGFVQF NR+ AE+A+ +LQG +G +RLSWGRN Sbjct: 314 VSEEELKYLFQNFGEIVYVKIPPGKGCGFVQFVNRQSAEIAINQLQGYPLGNSRIRLSWGRN 375
BLAST of CX299956 vs. ExPASy Swiss-Prot
Match: CSX1_SCHPO (RNA-binding post-transcriptional regulator csx1 OS=Schizosaccharomyces pombe GN=csx1 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.087e-12 Identity = 30/63 (47.62%), Postives = 45/63 (71.43%), Query Frame = 1 Query: 1 DVSDEDLREPFSQFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGRN 189 ++S++DL+ F FG IL++KIP GKGCGFVQ++ + AE A+ +QG +G +RL+WG N Sbjct: 307 NLSEKDLQVCFQPFGRILNIKIPFGKGCGFVQYSEKSAAEKAINTMQGALVGTSHIRLAWGHN 369
BLAST of CX299956 vs. ExPASy Swiss-Prot
Match: NAM8_YEAST (Protein NAM8 OS=Saccharomyces cerevisiae GN=NAM8 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.353e-11 Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = 1 Query: 4 VSDEDLREPFSQFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGRN 189 V++++LR F FG I+ VKIPVGK CGFVQ+ +R AE A+ +QG I VRLSWGR+ Sbjct: 324 VTEDELRAYFQPFGTIVYVKIPVGKCCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
BLAST of CX299956 vs. ExPASy Swiss-Prot
Match: NGR1_YEAST (Negative growth regulatory protein NGR1 OS=Saccharomyces cerevisiae GN=NGR1 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.014e-11 Identity = 32/56 (57.14%), Postives = 39/56 (69.64%), Query Frame = 1 Query: 19 LREPFSQFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGR 186 LR F FG IL+V+IP GK CGFV+F R DAE ++Q LQG +G +RLSWGR Sbjct: 376 LRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGLQGFIVGGSPIRLSWGR 431 The following BLAST results are available for this feature:
BLAST of CX299956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299956 ID=CX299956; Name=CX299956; organism=Citrus clementina; type=EST; length=622bpback to top |