CX299958
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299958 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 1.291e-19 Identity = 54/115 (46.96%), Postives = 68/115 (59.13%), Query Frame = -3 Query: 215 GKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGLGETIRKIKNHPNRATQQRKGVGKTPAPRDKK*N-------TWGNNPRPNLEC 538 GK YYGRGP+Q++ N NY AG+ IGFDGL P+ VA+D ISFKTALW+WM VH ++QG G TIR I N A + GK P + + N +G +P NL C Sbjct: 178 GKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMNNVHQVMSQGFGATIRAI----NGALECN---GKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 285
BLAST of CX299958 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.906e-19 Identity = 54/115 (46.96%), Postives = 67/115 (58.26%), Query Frame = -3 Query: 215 GKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGLGETIRKIKNHPNRATQQRKGVGKTPAPRDKK*N-------TWGNNPRPNLEC 538 GK YYGRGP+Q++ N NY AG+ IGFDGL P+ VA+D ISFKTALW+WM VH + QG G TIR I N A + GK P + + N +G +P NL C Sbjct: 181 GKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWMNNVHQVMLQGFGATIRAI----NGALECN---GKNPGAVNARVNYYKDYCRQFGVDPGGNLYC 288
BLAST of CX299958 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.906e-19 Identity = 44/69 (63.77%), Postives = 52/69 (75.36%), Query Frame = -3 Query: 329 KFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGLGETIRKI 535 K Y+GRGPIQL+ N NY AG A FDGL +PETV+ D V+SFKTALWYWM++V +NQG G TIR I Sbjct: 164 KGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWMQHVRPVINQGFGATIRAI 232
BLAST of CX299958 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.408e-19 Identity = 52/115 (45.22%), Postives = 67/115 (58.26%), Query Frame = -3 Query: 215 GKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGLGETIRKIKNHPNRATQQRKGVGKTPAPRDKK*NTW-------GNNPRPNLEC 538 G+ YYGRGP+Q++ N NY AGRAIGFDGL P VARD V++FK ALW+WM VH + QG G T R ++ RA + G PA + + + G +P PNL C Sbjct: 162 GQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNSVHGVVPQGFGATTRAMQ----RALECG---GNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 269
BLAST of CX299958 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.093e-18 Identity = 43/70 (61.43%), Postives = 51/70 (72.86%), Query Frame = -3 Query: 329 GKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGLGETIRKI 538 GK YYGRGP+QL+ N NY AG+AIGFDGL +PE VA D SFK A+W+WM VHS +NQG G T + I Sbjct: 181 GKKYYGRGPLQLSWNYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMTNVHSVMNQGFGATTKAI 250
BLAST of CX299958 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.435e-18 Identity = 46/89 (51.69%), Postives = 56/89 (62.92%), Query Frame = -3 Query: 284 GKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGLGETIRKIKN----HPNRATQQRKGVG 538 G+ YYGRGP+Q++ N NY AGR IGF+GL P VA+D VI+FKTALW+WM VH + QG G TIR I + N Q VG Sbjct: 173 GQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWMNNVHGVMPQGFGATIRAINGALECNGNNPAQMNARVG 261
BLAST of CX299958 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.153e-18 Identity = 49/110 (44.55%), Postives = 62/110 (56.36%), Query Frame = -3 Query: 215 GKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSAL--NQGLGETIRKIKNHPNRATQQRKGVGKTPAPRDKK*NTWGNNPRPNLEC 538 GK YYGRGP+Q++ N NY AG++IGFDGL P+ VAR V++F+TALWYW VH A QG G TIR I + V A + +G +P NL C Sbjct: 162 GKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTNNVHDAFVSGQGFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQQFGVDPGSNLTC 271
BLAST of CX299958 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 2.692e-17 Identity = 43/73 (58.90%), Postives = 53/73 (72.60%), Query Frame = -3 Query: 329 KFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMR----YVHSALNQGLGETIRKI 535 K Y+GRGP+QL+ N NYIDAG+ + FDGLN P+ V RD +ISFKT+LW+W+R YV NQG G TIR I Sbjct: 140 KEYFGRGPMQLSWNYNYIDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWIRKGVQYVILDPNQGFGATIRII 212
BLAST of CX299958 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 3.639e-14 Identity = 36/52 (69.23%), Postives = 41/52 (78.85%), Query Frame = -3 Query: 383 GKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM 538 GK YYGRGPIQ++ N NY GRAIG D LN+P+ VA D VISFKTALW+WM Sbjct: 173 GKQYYGRGPIQISWNYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWM 224
BLAST of CX299958 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 8.106e-14 Identity = 42/108 (38.89%), Postives = 56/108 (51.85%), Query Frame = -3 Query: 215 GKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGLGETIRKIKNHPNRATQQRKGVGKTPAPRDKK*NTWGNNPRPNLEC 538 GK Y+GRGPIQL+ N NY G+++ + L PE V+ + ++F+T LW+WM V LNQG G TIR I + RD G +P PNL C Sbjct: 162 GKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRPVLNQGFGATIRAINGMECNGGNSGAVNARIRYYRDYC-GQLGVDPGPNLSC 268 The following BLAST results are available for this feature:
BLAST of CX299958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299958 ID=CX299958; Name=CX299958; organism=Citrus clementina; type=EST; length=540bpback to top |