CX300164

Overview
NameCX300164
Unique NameCX300164
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length394
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300164 vs. ExPASy Swiss-Prot
Match: ENPL_CATRO (Endoplasmin homolog OS=Catharanthus roseus GN=HSP90 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.804e-18
Identity = 52/96 (54.17%), Postives = 60/96 (62.50%), Query Frame = 1
Query:    1 K*LRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNINPXXXXXXXXXXXXXXXXXXMKESSAAKEDVDTEYSGKDEL 288
            K LRERVVKD ED  V+QTA+L+YQTALMESGF LNDPK+FAS IY +VKSSL I+P                    ESSAA++        KDEL
Sbjct:  722 KELRERVVKDAEDESVKQTARLMYQTALMESGFMLNDPKEFASSIYDSVKSSLKISPDATVEEEDDTEEAEAESGTTESSAAEDAGAETLDLKDEL 817          
BLAST of CX300164 vs. ExPASy Swiss-Prot
Match: ENPL_ARATH (Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.873e-16
Identity = 38/57 (66.67%), Postives = 49/57 (85.96%), Query Frame = 1
Query:    1 K*LRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNINP 171
            K L++R+  DPED  V++TAQL+YQTAL+ESGF L DPKDFA+RIY++VKS LNI+P
Sbjct:  718 KELKDRIASDPEDESVKETAQLMYQTALIESGFILTDPKDFAARIYNSVKSGLNISP 774          
BLAST of CX300164 vs. ExPASy Swiss-Prot
Match: ENPL_HORVU (Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.089e-13
Identity = 34/57 (59.65%), Postives = 48/57 (84.21%), Query Frame = 1
Query:    1 K*LRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNINP 171
            K LR++V +D +  G++QTA+L+YQTALMESGF+L DPKDFAS IY +V+ SL+++P
Sbjct:  715 KELRDKVAQDSDSEGLKQTARLVYQTALMESGFNLPDPKDFASSIYRSVQKSLDLSP 771          
The following BLAST results are available for this feature:
BLAST of CX300164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ENPL_CATRO4.804e-1854.17Endoplasmin homolog OS=Catharanthus roseus GN=HSP9... [more]
ENPL_ARATH5.873e-1666.67Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD... [more]
ENPL_HORVU2.089e-1359.65Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionC07007A04SK SaltLeaf1 Citrus clementina cDNA clone C07007A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300164 ID=CX300164; Name=CX300164; organism=Citrus clementina; type=EST; length=394bp
AAATAGCTCCGGGAGAGAGTCGTGAAGGACCCTGAGGATGCGGGTGTCCA
GCAAACAGCCCAACTCATTTACCAGACGGCACTCATGGAGAGTGGCTTTT
CGCTCAATGATCCCAAGGATTTTGCCTCCCGAATTTACAGCACGGTGAAA
TCTAGTCTTAACATTAACCCTGATGCAGCTGTTGAGGAGGAAGATGATGT
AGAAGAGACTGATGCTGACACTGAAATGAAAGAATCTTCGGCTGCCAAAG
AGGACGTGGATACAGAGTATTCTGGCAAGGATGAGTTGTAGATTGCCTAA
TAAAAGCATGGGCAACAACATCCCAGTTTCTTAGGAAAGCATAAACGCTC
TGCATAGTGCGTTCATTTCCAGTTTTGGAAACTTTGGTGAAAAA
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