CX300236
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300236 vs. ExPASy Swiss-Prot
Match: KCS21_ARATH (3-ketoacyl-CoA synthase 21 OS=Arabidopsis thaliana GN=KCS21 PE=2 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 1.529e-59 Identity = 107/193 (55.44%), Postives = 142/193 (73.58%), Query Frame = 1 Query: 4 TYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFGYVIQSYYESRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLGLDEYDLEPARMALHRFGN 582 T +N LA+VVSTE+MGP+WYCG+++SMMLSN LFR+GG S+LLTN K++A++KL +VR H GS+DEAY CC+Q+ED+ GHPGF T NLQVL+P++LP++E Y I +++ TS+ + A G GLNLK G++HFC+HPGGRA+I+G GK LGL E+D+EPARMALHRFGN Sbjct: 188 TRENALALVVSTETMGPHWYCGKDRSMMLSNCLFRAGGSSVLLTNAARFKNQALMKLVTVVRAHVGSDDEAYSCCIQMEDRDGHPGFLLTKYLKKAAARALTKNLQVLLPRVLPVKELIRYAI----VRALKRRTSAKREPASSGIGLNLKTGLQHFCIHPGGRAIIEGVGKSLGLTEFDIEPARMALHRFGN 376
BLAST of CX300236 vs. ExPASy Swiss-Prot
Match: KCS12_ARATH (3-ketoacyl-CoA synthase 12 OS=Arabidopsis thaliana GN=KCS12 PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 5.089e-55 Identity = 101/199 (50.75%), Postives = 138/199 (69.35%), Query Frame = 1 Query: 1 RTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFGYVIQSYYES-RIR----KSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLGLDEYDLEPARMALHRFGN 582 ++Y NKLA+V ++ES+ PNWY G +SM+L+N LFRSGGC++LLTN R+L+ KA+ KL C+VRTH G+ +E+Y CC+Q ED+QG GF F NL+V+ PKILP+ E ++++ + +IR K +++ P L AG+N K GIEHFC+H GG+AVIDG G L L+EYD+EPARM LHRFGN Sbjct: 183 KSYANKLALVATSESLSPNWYSGNNRSMILANCLFRSGGCAILLTNKRSLRKKAMFKLKCMVRTHHGAREESYNCCIQAEDEQGRVGFYLGKNLPKAATRAFVENLKVITPKILPVTELIRFMLKLLIKKIKIRQNPSKGSTNLPPGTPLKAGINFKTGIEHFCIHTGGKAVIDGIGHSLDLNEYDIEPARMTLHRFGN 381
BLAST of CX300236 vs. ExPASy Swiss-Prot
Match: KCS3_ARATH (3-ketoacyl-CoA synthase 3 OS=Arabidopsis thaliana GN=KCS3 PE=2 SV=2) HSP 1 Score: 206.838 bits (525), Expect = 6.221e-53 Identity = 101/200 (50.50%), Postives = 137/200 (68.50%), Query Frame = 1 Query: 1 RTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFGY----VIQSYYESRIRKSTSSTK--PEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLGLDEYDLEPARMALHRFGN 582 +TYKNKLA+VV++ES+ PNWY G +SM+L+N LFRSGGC++LLTN R+L +A+ KL CLVRTH G+ D+++ C+Q ED+ GH G F NL+V+ PKILP+ E + +++ S + ST+ T+ P+A + AG+N K GI+HFC+H GG+AVID G L L+EYDLEPARM LHRFGN Sbjct: 226 KTYKNKLALVVTSESLSPNWYSGNNRSMILANCLFRSGGCAVLLTNKRSLSRRAMFKLRCLVRTHHGARDDSFNACVQKEDELGHIGVHLDKTLPKAATRAFIDNLKVITPKILPVTELLRFMLCLLLKKLRSSPSKGSTNVTQAAPKAGVKAGINFKTGIDHFCIHTGGKAVIDAIGYSLDLNEYDLEPARMTLHRFGN 425
BLAST of CX300236 vs. ExPASy Swiss-Prot
Match: KCS1_ARATH (3-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana GN=KCS1 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.220e-32 Identity = 75/190 (39.47%), Postives = 108/190 (56.84%), Query Frame = 1 Query: 13 NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFGYVIQSYYESRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLGLDEYDLEPARMALHRFGN 582 N A+VVSTE++ NWY G ++SM+L N +FR GG ++LL+N R + K+ L +VRTH GS+D+ Y C Q ED++G G N+ L P +LPL EQ ++I S +++ K + + + K EHFC+H GGRAV+D K L L ++ +EP+RM LHRFGN Sbjct: 277 NSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAILLSNRRQDRKKSKYSLVNVVRTHKGSDDKNYNCVYQKEDERGTIGVSLARELMSVAGDALKTNITTLGPMVLPLSEQLMFLI-----SLVKRKMFKLKVKPYIP---DFKLAFEHFCIHAGGRAVLDEVQKNLDLKDWHMEPSRMTLHRFGN 458
BLAST of CX300236 vs. ExPASy Swiss-Prot
Match: KCS7_ARATH (3-ketoacyl-CoA synthase 7 OS=Arabidopsis thaliana GN=KCS7 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.033e-31 Identity = 73/194 (37.63%), Postives = 111/194 (57.22%), Query Frame = 1 Query: 1 RTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFGYVIQSYYESRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLGLDEYDLEPARMALHRFGN 582 + + + LA+V+S E++ PN Y G+ KSM+++N +FR GG ++LL+N + HKA KL ++RTH GS+ E+YE MQ D++G G +N+ L P++LP EQ Y+I S+ + + P N K EHFC+H GGRA+I+G K L LD+ D+E +R L+R+GN Sbjct: 198 KIHGDSLALVLSMEAVSPNGYRGKCKSMLIANTIFRMGGAAILLSNRKQDSHKAKYKLQHIIRTHVGSDTESYESVMQQVDEEGKVGVALSKQLVRVASKALKINVVQLGPRVLPYSEQLKYII-SFIQRKWGMHKEIYTP--------NFKKAFEHFCIHAGGRAIIEGVEKHLKLDKEDVEASRSTLYRYGN 382
BLAST of CX300236 vs. ExPASy Swiss-Prot
Match: KCS14_ARATH (Probable 3-ketoacyl-CoA synthase 14 OS=Arabidopsis thaliana GN=KCS14 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.033e-31 Identity = 73/190 (38.42%), Postives = 105/190 (55.26%), Query Frame = 1 Query: 13 NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFGYVIQSYYESRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLGLDEYDLEPARMALHRFGN 582 N A++VSTE+M + Y G ++SM++ N LFR GG +++L+N + ++ +L +VRTH GS+D+ Y C Q ED +G G NL L P +LPL E+ +++ R S P+ K +HFC+H GGRA++D KGLGL E+DLEP+RM LHRFGN Sbjct: 208 NTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIVRTHKGSSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPD--------FKLCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGN 389
BLAST of CX300236 vs. ExPASy Swiss-Prot
Match: KCS13_ARATH (3-ketoacyl-CoA synthase 13 OS=Arabidopsis thaliana GN=HIC PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.033e-31 Identity = 73/190 (38.42%), Postives = 105/190 (55.26%), Query Frame = 1 Query: 13 NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFGYVIQSYYESRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLGLDEYDLEPARMALHRFGN 582 N A++VSTE+M + Y G ++SM++ N LFR GG +++L+N + ++ +L +VRTH GS+D+ Y C Q ED +G G NL L P +LPL E+ +++ R S P+ K +HFC+H GGRA++D KGLGL E+DLEP+RM LHRFGN Sbjct: 215 NTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIVRTHKGSSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDSLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPD--------FKLCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGN 396
BLAST of CX300236 vs. ExPASy Swiss-Prot
Match: KCS5_ARATH (3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana GN=KCS5 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.947e-30 Identity = 74/194 (38.14%), Postives = 108/194 (55.67%), Query Frame = 1 Query: 1 RTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFGYVIQSYYESRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLGLDEYDLEPARMALHRFGN 582 + + N AI++STE + PN+Y G E++M+L N LFR GG ++LL+N R+ + +A KL LVRTH G++D++Y C M+ ED+ G+ G N+ + P +LP EQ + S I + + K + + + K EHFC+H GGRAVID K L L +E +RM LHRFGN Sbjct: 235 QVHPNSNAIIISTEIITPNYYKGNERAMLLPNCLFRMGGAAILLSNRRSDRWRAKYKLCHLVRTHRGADDKSYNCVMEQEDKNGNVGINLSKDLMTIAGEALKANITTIGPLVLPASEQL-----LFLSSLIGRKIFNPKWKPYIP---DFKQAFEHFCIHAGGRAVIDELQKNLQLSGEHVEASRMTLHRFGN 420
BLAST of CX300236 vs. ExPASy Swiss-Prot
Match: KCS20_ARATH (Probable 3-ketoacyl-CoA synthase 20 OS=Arabidopsis thaliana GN=KCS20 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.544e-30 Identity = 74/196 (37.76%), Postives = 106/196 (54.08%), Query Frame = 1 Query: 1 RTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFGYVIQSYY--ESRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLGLDEYDLEPARMALHRFGN 582 + ++ LA++VSTE++ +WY G+++SM+L+N LFR G ++L+++N + A +L +VR + +D AY C Q D G MNL L P +LP EQF YVIQ + +I +S SS P N K EHFC+H GGRAVI L L + D+EP++M LHRFGN Sbjct: 202 QAHRGSLALIVSTEALNTHWYIGKDRSMLLTNCLFRMGAAAVLMSSNDHDRDNAKYELLHVVRKNKAKDDRAYRCIYQDIDSDEKQGVSITKDVISVAGDMLKMNLTSLGPLVLPYLEQFQYVIQHILCKKLKIYESNSSYTP--------NFKTAFEHFCIHTGGRAVIQAMEMNLKLTKVDIEPSKMTLHRFGN 389
BLAST of CX300236 vs. ExPASy Swiss-Prot
Match: KCS8_ARATH (3-ketoacyl-CoA synthase 8 OS=Arabidopsis thaliana GN=KCS8 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.322e-30 Identity = 73/198 (36.87%), Postives = 108/198 (54.55%), Query Frame = 1 Query: 1 RTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFGYVI----QSYYESRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLGLDEYDLEPARMALHRFGN 582 + ++N AIVVSTE++ N Y G+ KSM+++N LFR GG ++LL+N +++A +L VR H GS+D ++EC Q ED+ G G +N+ L P +LPL+E+ + I + Y++ +R T + K EHFC+H GGRA+ID K L L +E +RM LHRFGN Sbjct: 228 QVHRNTYAIVVSTENITQNLYLGKNKSMLVTNCLFRVGGAAVLLSNRSRDRNRAKYELVHTVRIHTGSDDRSFECATQEEDEDGIIGVTLTKNLPMVAARTLKINIATLGPLVLPLKEKLAFFITFVKKKYFKPELRNYTP------------DFKLAFEHFCIHAGGRALIDELEKNLKLSPLHVEASRMTLHRFGN 413 The following BLAST results are available for this feature:
BLAST of CX300236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300236 ID=CX300236; Name=CX300236; organism=Citrus clementina; type=EST; length=583bpback to top |