CX300457

Overview
NameCX300457
Unique NameCX300457
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length453
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11037 contig Ccv1_Contig11037:1543..1995. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: P5CS_SOLLC (Delta-1-pyrroline-5-carboxylate synthetase OS=Solanum lycopersicum GN=PRO2 PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 5.007e-65
Identity = 117/149 (78.52%), Postives = 132/149 (88.59%), Query Frame = 3
Query:    6 STKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 452
            STKIPVLGHADGICHVYVDKSA++D+AK I +DAKIDYPAACNAMETLLVHKDLA NG LN+L+VELQ +GV L+GGP+AS LL IPE R F HEY+S+ CTVE+V+DV AAIDHIHQHGSAHTD I+ EDQ+VAE FL QVDSAAVFH
Sbjct:  502 STKIPVLGHADGICHVYVDKSADMDMAKRITVDAKIDYPAACNAMETLLVHKDLAQNGGLNDLIVELQTKGVSLYGGPKASSLLMIPEARTFRHEYSSLACTVEVVEDVYAAIDHIHQHGSAHTDSIITEDQEVAEVFLRQVDSAAVFH 650          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: P5CS_ACTDE (Delta-1-pyrroline-5-carboxylate synthetase OS=Actinidia deliciosa PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 2.326e-62
Identity = 113/150 (75.33%), Postives = 129/150 (86.00%), Query Frame = 3
Query:    3 ESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 452
            ESTKIPVLGHADGICHVYVDKSAN+D+AK +V+DAK DYPAACNAMETLLVHKDL  NG L+EL+VELQ +GV + GGPRAS LL IPE R  HHEY+S+ CT+EIVDDV AAIDHIH+HGSAHTD I+ ED +VAE FL QVDS++V H
Sbjct:  501 ESTKIPVLGHADGICHVYVDKSANMDMAKKVVLDAKTDYPAACNAMETLLVHKDLVQNGCLDELIVELQIKGVVIHGGPRASSLLHIPEARSLHHEYSSLACTIEIVDDVYAAIDHIHRHGSAHTDSIITEDHEVAEIFLRQVDSSSVLH 650          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: P5CS2_ARATH (Delta-1-pyrroline-5-carboxylate synthetase B OS=Arabidopsis thaliana GN=P5CSB PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 6.768e-62
Identity = 115/149 (77.18%), Postives = 126/149 (84.56%), Query Frame = 3
Query:    6 STKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 452
            STKIPVLGHADGICHVYVDKS  LD+AK IV DAK+DYPAACNAMETLLVHKDL  NG L++L+  LQ +GV L+GGPRAS  L IPET+ FHHEY+S  CTVEIV+DV  AIDHIHQHGSAHTDCIV ED +VAE FL QVDSAAVFH
Sbjct:  502 STKIPVLGHADGICHVYVDKSGKLDMAKRIVSDAKLDYPAACNAMETLLVHKDLEQNGFLDDLIYVLQTKGVTLYGGPRASAKLNIPETKSFHHEYSSKACTVEIVEDVYGAIDHIHQHGSAHTDCIVTEDSEVAEIFLRQVDSAAVFH 650          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: P5CS1_ARATH (Delta-1-pyrroline-5-carboxylate synthetase A OS=Arabidopsis thaliana GN=P5CSA PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 4.850e-60
Identity = 110/149 (73.83%), Postives = 124/149 (83.22%), Query Frame = 3
Query:    6 STKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 452
            +TKIPVLGHADGICHVYVDK+ + D+AK IV DAK+DYPAACNAMETLLVHKDL  N  LNEL+  LQ  GV L+GGPRASK+L IPE R F+HEY +  CTVE+V+DV  AIDHIH+HGSAHTDCIV ED +VAE FL QVDSAAVFH
Sbjct:  502 TTKIPVLGHADGICHVYVDKACDTDMAKRIVSDAKLDYPAACNAMETLLVHKDLEQNAVLNELIFALQSNGVTLYGGPRASKILNIPEARSFNHEYCAKACTVEVVEDVYGAIDHIHRHGSAHTDCIVTEDHEVAELFLRQVDSAAVFH 650          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: P5CS_MESCR (Delta-1-pyrroline-5-carboxylate synthetase OS=Mesembryanthemum crystallinum GN=P5CS PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 7.003e-59
Identity = 112/152 (73.68%), Postives = 127/152 (83.55%), Query Frame = 3
Query:    3 ESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL--LKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 452
            EST+IPVLGHADGICHVYVDKSAN+D+AK IV+DAK DYPAACNAMETLLVHKDLA NG LN+L+V+L+ EGV +FGGPR   L    I  T+ F+ EY+S  CTVEIVDDV AAI+HI+ HGSAHTDCI+AED KVAETFL  VDSAAV H
Sbjct:  498 ESTRIPVLGHADGICHVYVDKSANMDMAKRIVLDAKTDYPAACNAMETLLVHKDLAENGGLNDLIVDLRTEGVTMFGGPRIDALQEFNIQATQTFNREYSSPACTVEIVDDVYAAIEHINHHGSAHTDCIIAEDHKVAETFLQLVDSAAVLH 649          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: P5CS_ORYSJ (Delta-1-pyrroline-5-carboxylate synthetase OS=Oryza sativa subsp. japonica GN=P5CS PE=2 SV=2)

HSP 1 Score: 225.328 bits (573), Expect = 9.147e-59
Identity = 107/149 (71.81%), Postives = 128/149 (85.91%), Query Frame = 3
Query:    6 STKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 452
            STKIPVLGHADGICHVY+DKSA++D+AK+IV+DAKIDYPAACNAMETLLVHKDL  +  L++++V L+ EGV ++GGP A K L  P+   FHHEY+SM CTVE VDDV++AIDHIH++GSAHTDCIV  D KVAETFL +VDSAAVFH
Sbjct:  502 STKIPVLGHADGICHVYIDKSADMDMAKHIVMDAKIDYPAACNAMETLLVHKDLMKSPGLDDILVALKTEGVNIYGGPIAHKALGFPKAVSFHHEYSSMACTVEFVDDVQSAIDHIHRYGSAHTDCIVTTDDKVAETFLRRVDSAAVFH 650          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: P5CS_VIGAC (Delta-1-pyrroline-5-carboxylate synthetase OS=Vigna aconitifolia PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 2.661e-58
Identity = 108/149 (72.48%), Postives = 126/149 (84.56%), Query Frame = 3
Query:    6 STKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 452
            STKIPVLGHADGICHVYVDKSAN+++AK IV+DAK+DYPAACNAMETLL+HKDL   G L E++++L+ EGV L+GGP AS LL IP+   FHHEY+S+ CT EIVDDV AAIDHI+ +GSAHTD IVAED +VA  FL QVDSAAVFH
Sbjct:  503 STKIPVLGHADGICHVYVDKSANVEMAKRIVLDAKVDYPAACNAMETLLIHKDLIEKGWLKEIILDLRTEGVILYGGPVASSLLNIPQAHSFHHEYSSLACTAEIVDDVYAAIDHINLYGSAHTDSIVAEDNEVANVFLRQVDSAAVFH 651          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_TRIEI (Gamma-glutamyl phosphate reductase OS=Trichodesmium erythraeum (strain IMS101) GN=proA PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 3.500e-34
Identity = 77/153 (50.33%), Postives = 101/153 (66.01%), Query Frame = 3
Query:    3 ESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL---FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 452
            E+T+IPVLGHA+GICHVYVDK A++  A  I IDAK  YPAACNA ETLLVH D+A    L+E+  EL+   V L G     ++L   +      +  EY+ +V +V++VD + +AI HI+ +GS HTD I+ ED K AE FL Q+ SA VFH
Sbjct:  214 ENTQIPVLGHAEGICHVYVDKFADIQKAVKITIDAKTQYPAACNAAETLLVHTDVAAK-FLSEVFPELEKRQVELRGDRATQQILSSVKEATDLDWATEYSDLVLSVKVVDSLDSAIAHINNYGSGHTDAIITEDGKAAEIFLAQIGSAGVFH 365          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: P5CS_HUMAN (Delta-1-pyrroline-5-carboxylate synthetase OS=Homo sapiens GN=ALDH18A1 PE=1 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 3.500e-34
Identity = 69/147 (46.94%), Postives = 99/147 (67.35%), Query Frame = 3
Query:   15 IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKI--PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVF 449
            IPV+GH++GICH+YVD  A++D    +V D+K +YPAACNA+ETLL+H+DL      ++++  L+ E V +  GP+ +  L     E +    EY  +   +E+VD+V+ AIDHIH++GS+HTD IV ED+  AE FL  VDSA VF
Sbjct:  574 IPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEYPAACNALETLLIHRDLLRTPLFDQIIDMLRVEQVKIHAGPKFASYLTFSPSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVF 720          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_SYNPW (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain WH7803) GN=proA PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 5.970e-34
Identity = 73/153 (47.71%), Postives = 102/153 (66.67%), Query Frame = 3
Query:    3 ESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL---FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 452
            ++T+IPVLGHADGICH+YVD +A+LD A  + +D+K  YPAACNA+ETLLVH+ +A +  L+  +   +  GV +  G  AS  L +PE+     +  EY  +   V++VDD+ AA DHI + GS HT+CIV ED   A+ FL  +DSA V+H
Sbjct:  218 DNTRIPVLGHADGICHLYVDAAADLDKAVRVALDSKTQYPAACNAIETLLVHRSVAAS-FLSAAIPAFRDAGV-VLRGDAASVALGVPESATEADWRTEYLDLTLAVKVVDDLAAAADHIRRFGSRHTECIVTEDAAAADRFLSSIDSAGVYH 368          
The following BLAST results are available for this feature:
BLAST of CX300457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
P5CS_SOLLC5.007e-6578.52Delta-1-pyrroline-5-carboxylate synthetase OS=Sola... [more]
P5CS_ACTDE2.326e-6275.33Delta-1-pyrroline-5-carboxylate synthetase OS=Acti... [more]
P5CS2_ARATH6.768e-6277.18Delta-1-pyrroline-5-carboxylate synthetase B OS=Ar... [more]
P5CS1_ARATH4.850e-6073.83Delta-1-pyrroline-5-carboxylate synthetase A OS=Ar... [more]
P5CS_MESCR7.003e-5973.68Delta-1-pyrroline-5-carboxylate synthetase OS=Mese... [more]
P5CS_ORYSJ9.147e-5971.81Delta-1-pyrroline-5-carboxylate synthetase OS=Oryz... [more]
P5CS_VIGAC2.661e-5872.48Delta-1-pyrroline-5-carboxylate synthetase OS=Vign... [more]
PROA_TRIEI3.500e-3450.33Gamma-glutamyl phosphate reductase OS=Trichodesmiu... [more]
P5CS_HUMAN3.500e-3446.94Delta-1-pyrroline-5-carboxylate synthetase OS=Homo... [more]
PROA_SYNPW5.970e-3447.71Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]

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Properties
Property NameValue
Genbank descriptionC07010D12SK SaltLeaf1 Citrus clementina cDNA clone C07010D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300457 ID=CX300457; Name=CX300457; organism=Citrus clementina; type=EST; length=453bp
AGGAGTCAACAAAAATTCCTGTACTTGGTCATGCTGATGGAATTTGTCAT
GTTTATGTTGATAAATCGGCTAACCTTGATGTGGCAAAGAACATTGTTAT
TGATGCGAAGATAGACTATCCTGCAGCCTGCAATGCTATGGAAACTCTTC
TGGTACACAAGGATTTAGCATGCAATGGTGCACTCAATGAGCTTGTTGTA
GAACTTCAACATGAAGGTGTCGGTTTATTTGGCGGACCAAGAGCAAGTAA
ATTACTAAAAATTCCTGAGACACGCTTATTCCATCATGAGTACAACTCAA
TGGTTTGTACGGTTGAAATTGTGGACGATGTGCGTGCTGCTATTGACCAT
ATTCATCAACATGGAAGTGCCCATACTGATTGCATTGTTGCAGAAGATCA
AAAAGTTGCTGAAACATTTTTATGTCAAGTTGACAGTGCTGCAGTATTTC
ATA
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