CX300460
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300460 vs. ExPASy Swiss-Prot
Match: VA714_ARATH (Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana GN=VAMP714 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.067e-39 Identity = 84/118 (71.19%), Postives = 88/118 (74.58%), Query Frame = 1 Query: 1 MNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSCRS 354 MNDEFSRVLHQQMEFFSSNPS DTLNRVRGEVSEIR++MVENIEKI+ERGDRIELLVDKTATMQD +FHFRKQSKRLRRALWMKN PSCRS Sbjct: 104 MNDEFSRVLHQQMEFFSSNPSVDTLNRVRGEVSEIRSVMVENIEKIMERGDRIELLVDKTATMQDSSFHFRKQSKRLRRALWMKNAKLLVLLTCLIVFLLYIIIASFCGGITLPSCRS 221
BLAST of CX300460 vs. ExPASy Swiss-Prot
Match: VA713_ARATH (Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana GN=VAMP713 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.015e-26 Identity = 50/85 (58.82%), Postives = 72/85 (84.71%), Query Frame = 1 Query: 1 MNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 255 MNDEFSRVL QQMEF+S++P+AD ++R++GE+S++R +M+ENI+K+L+RG+R+ELLVDKT MQ F FRKQ++R R +W +N Sbjct: 104 MNDEFSRVLSQQMEFYSNDPNADRMSRIKGEMSQVRNVMIENIDKVLDRGERLELLVDKTENMQGNTFRFRKQARRYRTIMWWRN 188
BLAST of CX300460 vs. ExPASy Swiss-Prot
Match: VA712_ARATH (Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana GN=VAMP712 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.146e-25 Identity = 48/85 (56.47%), Postives = 73/85 (85.88%), Query Frame = 1 Query: 1 MNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 255 MNDEFSRVL+QQ+E++S++P+ADT++R++GE++++R +M+ENI+ IL+RG+R+ELLVDKTA MQ F FRKQ++R +W +N Sbjct: 103 MNDEFSRVLNQQIEYYSNDPNADTISRIKGEMNQVRDVMIENIDNILDRGERLELLVDKTANMQGNTFRFRKQTRRFNNTVWWRN 187
BLAST of CX300460 vs. ExPASy Swiss-Prot
Match: VA711_ARATH (Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana GN=VAMP711 PE=2 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 4.354e-25 Identity = 47/85 (55.29%), Postives = 73/85 (85.88%), Query Frame = 1 Query: 1 MNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 255 MN+EFSRVL QQ++++S++P+AD +NR++GE++++R +M+ENI+K+L+RG+R+ELLVDKTA MQ F FRKQ++R R +W +N Sbjct: 103 MNEEFSRVLSQQIDYYSNDPNADRINRIKGEMNQVRGVMIENIDKVLDRGERLELLVDKTANMQGNTFRFRKQARRFRSNVWWRN 187
BLAST of CX300460 vs. ExPASy Swiss-Prot
Match: VAM7B_DICDI (Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum GN=vamp7B PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.335e-15 Identity = 36/86 (41.86%), Postives = 61/86 (70.93%), Query Frame = 1 Query: 1 MNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIE-KILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 255 MN +FSR L M+ +S+ DT++R E+ E++ I+V +I ++L+RG++IE+LV++T T+ +F F+KQSK+L+ A+W KN Sbjct: 102 MNSDFSRTLENLMDHYSNTTRVDTMSRTMAEIDEVKNILVSDIAPQLLKRGEKIEMLVERTDTLNQQSFKFKKQSKQLKCAMWWKN 187
BLAST of CX300460 vs. ExPASy Swiss-Prot
Match: VA726_ARATH (Putative vesicle-associated membrane protein 726 OS=Arabidopsis thaliana GN=VAMP726 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 2.648e-14 Identity = 35/86 (40.70%), Postives = 60/86 (69.77%), Query Frame = 1 Query: 1 MNDEFSRVLHQQMEFFSSNPSA-DTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 255 +N EF L + M++ + +P L++V+ +V+E++ +M+ENIEK+L+RG++IELLVDKT ++ A FR Q +++R LW +N Sbjct: 106 LNKEFGSKLKEHMQYCADHPEEISKLSKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKMKRKLWFEN 191
BLAST of CX300460 vs. ExPASy Swiss-Prot
Match: VA722_ARATH (Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana GN=VAMP722 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 4.516e-14 Identity = 36/86 (41.86%), Postives = 58/86 (67.44%), Query Frame = 1 Query: 1 MNDEFSRVLHQQMEFFSSNPSA-DTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 255 +N EF L + M++ +P L +V+ +VSE++ +M+ENIEK+L+RG++IELLVDKT ++ A FR Q ++RR +W +N Sbjct: 106 LNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTQMRRKMWFQN 191
BLAST of CX300460 vs. ExPASy Swiss-Prot
Match: VAMP7_MOUSE (Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 7.704e-14 Identity = 37/85 (43.53%), Postives = 55/85 (64.71%), Query Frame = 1 Query: 1 MNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 255 MN EFS VL Q++ S N S D + + +V E++ IMV NI+ + +RG+R+ELL+DKT + D + F+ S+ L RA+ MKN Sbjct: 102 MNSEFSSVLAAQLKHHSENKSLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKN 186
BLAST of CX300460 vs. ExPASy Swiss-Prot
Match: VA727_ARATH (Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana GN=VAMP727 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 7.704e-14 Identity = 33/86 (38.37%), Postives = 64/86 (74.42%), Query Frame = 1 Query: 1 MNDEFSRVLHQQMEFFSSNPSA-DTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 255 ++ EF +L + M++ S+P L++++ +++E++ IM++NIEK+L+RG++IELLVDKT +Q A F++Q ++LRR +W+++ Sbjct: 125 LDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIELLVDKTENLQFQADSFQRQGRQLRRKMWLQS 210
BLAST of CX300460 vs. ExPASy Swiss-Prot
Match: VAMP7_RAT (Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.314e-13 Identity = 36/85 (42.35%), Postives = 55/85 (64.71%), Query Frame = 1 Query: 1 MNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 255 MN EFS VL Q++ S N S D + + +V E++ IMV NI+ + +RG+R+ELL+DKT + D + F+ S+ L RA+ +KN Sbjct: 102 MNSEFSSVLAAQLKHHSENQSLDRVTETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCVKN 186 The following BLAST results are available for this feature:
BLAST of CX300460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300460 ID=CX300460; Name=CX300460; organism=Citrus clementina; type=EST; length=591bpback to top |