CX300496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300496 vs. ExPASy Swiss-Prot
Match: P2A01_ARATH (Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana GN=PP2A1 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.287e-26 Identity = 58/128 (45.31%), Postives = 83/128 (64.84%), Query Frame = 3 Query: 3 DENIEVVKLSHVCWMDVRGKFKISELSPGVMYEIVYVVKLTNAAFGWEAPVSLKLSLP-ADGKVQNRQVSLLEKPRGEWFELCVGNFLTETNNDGSESTAEVFFDFFEH-GGHWKSGLIIKAAVLRPK 380 +EN+E V L +VCW+D+ GKF L+PG++YE+V+ VKL + A+GW+ PV+LKL LP K Q ++VSL E PR +W ++ VG F+ E + G E+ F +EH G WK GL +K +RPK Sbjct: 123 NENVEAVGLKNVCWLDITGKFDTRNLTPGIVYEVVFKVKLEDPAYGWDTPVNLKLVLPNGKEKPQEKKVSLRELPRYKWVDVRVGEFVPEKSAAG-----EITFSMYEHAAGVWKKGLSLKGVAIRPK 245
BLAST of CX300496 vs. ExPASy Swiss-Prot
Match: P2A04_ARATH (Uncharacterized protein PHLOEM PROTEIN 2-LIKE A4 OS=Arabidopsis thaliana GN=PP2A4 PE=4 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.075e-19 Identity = 53/126 (42.06%), Postives = 70/126 (55.56%), Query Frame = 3 Query: 12 IEVVKLSHVCWMDVRGKFKISELSPGVMYEIVYVVKLTNAAFGWEAPVSLKLSLPADGK--VQNRQVSLLEKPRGEWFELCVGNFLTETNNDGSESTAEVFFDFFE-HGGHWKSGLIIKAAVLRPK 380 ++ L VCW+DV GKF EL+ YE+VYVVKL + A GW PV+LKL+LP DGK Q R + L E W ++ G F+T +N G E+ F +E WK GL +K +RPK Sbjct: 45 VDAAVLEAVCWLDVNGKFDTRELTLETTYEVVYVVKLEDTASGWNIPVNLKLTLP-DGKKRPQERSMCLKEHIGKRWIDISAGEFVTSPDNAG-----EISFSMYETKSCCWKRGLFVKCVEIRPK 164
BLAST of CX300496 vs. ExPASy Swiss-Prot
Match: P2A02_ARATH (Protein PHLOEM PROTEIN 2-LIKE A2 OS=Arabidopsis thaliana GN=PP2A2 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.250e-17 Identity = 49/128 (38.28%), Postives = 74/128 (57.81%), Query Frame = 3 Query: 3 DENIEVVKLSHVCWMDVRGKFKISELSPGVMYEIVYVVKLTNAAFGWEAPVSLKLSLP-ADGKVQNRQVSLLEKPRGEWFELCVGNFLTETNNDGSESTAEVFFDFFE-HGGHWKSGLIIKAAVLRPK 380 D EV K+ V W++V GKF+ +L+P +YE+V+VVKL ++A GW+ V+ KL LP + K + V+LLE R +W E+ G F+ + + ++ F E WKSGLI+K +RPK Sbjct: 72 DVRTEVAKMERVAWLEVVGKFETEKLTPNSLYEVVFVVKLIDSAKGWDFRVNFKLVLPTGETKERRENVNLLE--RNKWVEIPAGEFMISPEH----LSGKIEFSMLEVKSDQWKSGLIVKGVAIRPK 193
BLAST of CX300496 vs. ExPASy Swiss-Prot
Match: P2A05_ARATH (Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 6.860e-16 Identity = 49/125 (39.20%), Postives = 65/125 (52.00%), Query Frame = 3 Query: 12 IEVVKLSHVCWMDVRGKFKISELSPGVMYEIVYVVKLTNAAFGWEAPVSLKLSLPAD-GKVQNRQVSLLEKPRGEWFELCVGNFLTETNNDGSESTAEVFFDFFEHGGH-WKSGLIIKAAVLRPK 380 +E+ L W+DV GKF L+P YE+V+VVKL F WE V LKL LP K Q + V + + +W ++ VG F T N G E+ F +EH WKSGL +K +RPK Sbjct: 292 MEIAFLKSASWLDVAGKFDTRYLTPRTRYEVVFVVKL-EYTFEWETLVKLKLDLPNTWEKPQEQSVDMFDYISDQWLDIPVGEFTTSKKNVG-----EISFAMYEHECQLWKSGLFVKGVTIRPK 410
BLAST of CX300496 vs. ExPASy Swiss-Prot
Match: P2A07_ARATH (Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7 OS=Arabidopsis thaliana GN=PP2A7 PE=4 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.339e-11 Identity = 42/129 (32.56%), Postives = 67/129 (51.94%), Query Frame = 3 Query: 3 DENIEVVKLSHVCWMDVRGKFKISELSPGVMYEIVYVVKLTNAAFGWEAPVSLKLS-LPADG--KVQNRQVSLLEKPRGEWFELCVGNFLTETNNDGSESTAEVFFDFFEH-GGHWKSGLIIKAAVLRP 377 D IEV L+ V W+ + G F L+PG YE+V++V L + + GWE PV+L L + DG +Q R+ SL W ++ G + N + A++ F +++ KSGL++K +RP Sbjct: 206 DAAIEVAMLNEVHWLHMSGNFHTRNLTPGTKYEVVFLVSLDDTSSGWEQPVNLNLKVINPDGTESLQERETSLECHIGENWVDIQAGVLVAPPRN----AAAKMTFTMYQYVTSDRKSGLVVKGVAIRP 330
BLAST of CX300496 vs. ExPASy Swiss-Prot
Match: P2A06_ARATH (Protein PHLOEM PROTEIN 2-LIKE A6 OS=Arabidopsis thaliana GN=PP2A6 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.748e-11 Identity = 40/126 (31.75%), Postives = 63/126 (50.00%), Query Frame = 3 Query: 12 IEVVKLSHVCWMDVRGKFKISELSPGVMYEIVYVVKLTNAAFGWEAPVSLKLSL---PADGKVQNRQVSLLEKPRGEWFELCVGNFLTETNNDGSESTAEVFFDFFEHGGHW-KSGLIIKAAVLRP 377 IE+ L+ V W+ + G L+PG YE V+VVKL N A GWE PV+LKL + D +R +L + W ++ G F+ + A + F +++ + K GL++K +RP Sbjct: 269 IEIATLNKVYWLKIVGTITTENLTPGAKYEAVFVVKLENNASGWEQPVNLKLKVVQHDGDDDRVDRTENLNDYIGQNWVDILAGVFVVPPKT----TPATIIFTMYQYEDKYKKKGLVVKGVAIRP 390 The following BLAST results are available for this feature:
BLAST of CX300496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300496 ID=CX300496; Name=CX300496; organism=Citrus clementina; type=EST; length=620bpback to top |