CX300598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B1_MEDTR (Probable histone H2B.1 OS=Medicago truncatula PE=3 SV=3) HSP 1 Score: 171.785 bits (434), Expect = 9.859e-43 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 3 Query: 18 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 61 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B3_MEDTR (Probable histone H2B.3 OS=Medicago truncatula PE=3 SV=3) HSP 1 Score: 171.4 bits (433), Expect = 1.288e-42 Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 3 Query: 18 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 YKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 51 YKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 138
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B_GOSHI (Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV=3) HSP 1 Score: 170.629 bits (431), Expect = 2.196e-42 Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 3 Query: 18 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 60 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B_CAPAN (Histone H2B OS=Capsicum annuum GN=HIS2B PE=2 SV=3) HSP 1 Score: 170.629 bits (431), Expect = 2.196e-42 Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 3 Query: 18 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 YKIYIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 58 YKIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 145
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B9_ARATH (Histone H2B.9 OS=Arabidopsis thaliana GN=At5g02570 PE=1 SV=3) HSP 1 Score: 170.629 bits (431), Expect = 2.196e-42 Identity = 88/91 (96.70%), Postives = 88/91 (96.70%), Query Frame = 3 Query: 9 T*AYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 T YKIYIFKVLKQVHPDIGIS KAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 42 TETYKIYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 132
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B3_SOLLC (Histone H2B.3 (Fragment) OS=Solanum lycopersicum GN=H2B-3 PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 2.196e-42 Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 3 Query: 18 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 50 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 137
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B1_ARATH (Histone H2B.1 OS=Arabidopsis thaliana GN=At1g07790 PE=1 SV=3) HSP 1 Score: 170.629 bits (431), Expect = 2.196e-42 Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 3 Query: 18 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 61 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B3_ARATH (Histone H2B.3 OS=Arabidopsis thaliana GN=At2g28720 PE=1 SV=3) HSP 1 Score: 169.859 bits (429), Expect = 3.747e-42 Identity = 87/91 (95.60%), Postives = 89/91 (97.80%), Query Frame = 3 Query: 9 T*AYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 T YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 61 TETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B11_ARATH (Histone H2B.11 OS=Arabidopsis thaliana GN=At5g59910 PE=1 SV=5) HSP 1 Score: 169.474 bits (428), Expect = 4.893e-42 Identity = 86/88 (97.73%), Postives = 88/88 (100.00%), Query Frame = 3 Query: 18 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 63 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
BLAST of CX300598 vs. ExPASy Swiss-Prot
Match: H2B8_ARATH (Histone H2B.8 OS=Arabidopsis thaliana GN=At3g53650 PE=1 SV=3) HSP 1 Score: 169.088 bits (427), Expect = 6.391e-42 Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 3 Query: 18 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 281 YKIYIFKVLKQVHPDIGIS KAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGEL+KHAVSEGTKAVTKFTSS Sbjct: 51 YKIYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELSKHAVSEGTKAVTKFTSS 138 The following BLAST results are available for this feature:
BLAST of CX300598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300598 ID=CX300598; Name=CX300598; organism=Citrus clementina; type=EST; length=426bpback to top |