CX305572
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 4.880e-63 Identity = 105/150 (70.00%), Postives = 120/150 (80.00%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTARCNIATENPSDEQWKFFLEKPENALL 458 RGLA ED +A HG++ TI DYPFANDGL LWDAIK+WVTDYV HYYPD+ L+ SDE+LQ WW+E+R +GHGDKK EPWWPVLKT DLI ++TTI WVTSGHHA VNFGQY Y GYFPNRPTT R + TE+P+DE K F E PE LL Sbjct: 644 RGLAEEDKTAEHGVRLTIPDYPFANDGLILWDAIKEWVTDYVKHYYPDEELITSDEELQGWWSEVRNIGHGDKKDEPWWPVLKTQDDLIGVVTTIAWVTSGHHAAVNFGQYGYGGYFPNRPTTTRIRMPTEDPTDEALKEFYESPEKVLL 793
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2) HSP 1 Score: 196.052 bits (497), Expect = 6.187e-50 Identity = 90/150 (60.00%), Postives = 107/150 (71.33%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTARCNIATENPSD-EQWKFFLEKPENAL 455 RG+A EDP+A HGLK IEDYPFANDGL +WDAIK WV YV +YPD V DE+LQA+WTE+RT GHGDKK PWWP L +P+ L +TTIVWV + HHA VNFGQY + GYFPNRP+ AR + E P D + FL+ P+ AL Sbjct: 671 RGMAEEDPTAEHGLKLAIEDYPFANDGLLIWDAIKTWVQAYVARFYPDADSVAGDEELQAFWTEVRTKGHGDKKDAPWWPKLDSPESLAHTLTTIVWVAAAHHAAVNFGQYDFGGYFPNRPSIARTVMPVEEPVDGAAMERFLDNPDQAL 820
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 1.378e-49 Identity = 89/150 (59.33%), Postives = 107/150 (71.33%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTARCNIATENPSD-EQWKFFLEKPENAL 455 RG+A EDP+A HGL+ IEDYPFANDGL +WDAIK WV YV +YPD V DE+LQA+WTE+RT GHGDKK PWWP L +P+ L +TTIVWV + HHA VNFGQY + GYFPNRP+ AR + E P D + FL+ P+ AL Sbjct: 688 RGMAEEDPTAEHGLRLAIEDYPFANDGLLIWDAIKTWVQAYVARFYPDADSVAGDEELQAFWTEVRTKGHGDKKDAPWWPKLDSPESLAHTLTTIVWVAAAHHAAVNFGQYDFGGYFPNRPSIARTVMPVEEPVDGAAMERFLDNPDQAL 837
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 4.903e-47 Identity = 84/151 (55.63%), Postives = 106/151 (70.20%), Query Frame = 3 Query: 6 SRGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTARCNIATENPSDEQWKFFLEKPENALL 458 +RGLAV L+ I+DYP+A+DGL +W +IKQW +DYV+ YY V DE+L+AWW E+RT GH DKK EPWWPV T ++L++I+T I+WVTSGHHA VNFGQY Y GYFPNRPT R NI E D++ K F+ +PE LL Sbjct: 645 NRGLAVRRDDGE--LELAIKDYPYADDGLLIWGSIKQWASDYVDFYYKSDGDVAGDEELRAWWEEVRTKGHADKKDEPWWPVCDTKENLVQILTIIMWVTSGHHAAVNFGQYHYAGYFPNRPTVVRRNIPVEENRDDEMKKFMARPEEVLL 793
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 6.403e-47 Identity = 86/151 (56.95%), Postives = 108/151 (71.52%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTARCNIATENPSDEQWKFFLEKPENALLN 461 RG+AV +P+ L+ IEDYP+ANDGL +WDAIKQW YV HYYP + + DE+LQAWWTE+RT GH DK+ EPWWP L + ++L + + TI+WVTSGHHA VNFGQY GY PNRPT AR N+ TE D+ + F+E PE LL+ Sbjct: 677 RGMAVRNPNGE--LELAIEDYPYANDGLLVWDAIKQWALTYVQHYYPCAADIVDDEELQAWWTEVRTKGHADKQDEPWWPELDSHENLAQTLATIMWVTSGHHAAVNFGQYPMAGYIPNRPTMARRNMPTEIGGDDM-RDFVEAPEKVLLD 824
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOX1_SOLTU (Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 2.433e-46 Identity = 80/150 (53.33%), Postives = 105/150 (70.00%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTARCNIATENPSDEQWKFFLEKPENALL 458 RG+AVED S+PHG++ IEDYP+A DGL++W AIK WVTDY + YY + D +LQAWW E+R VGHGDKK+EPWWP ++TP++LI+ TTI+W+ S HA VNFGQY Y GY PNRPT +R + P +++ P+ A L Sbjct: 611 RGVAVEDSSSPHGVRLLIEDYPYAVDGLEIWSAIKSWVTDYCSFYYGSDEEILKDNELQAWWKELREVGHGDKKNEPWWPEMETPQELIDSCTTIIWIASALHAAVNFGQYPYAGYLPNRPTVSRRFM--PEPGTPEYEELKRNPDKAFL 758
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOXA_SOLLC (Lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 2.060e-45 Identity = 78/150 (52.00%), Postives = 105/150 (70.00%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTARCNIATENPSDEQWKFFLEKPENALL 458 RG+AVED S+PHG++ I+DYP+A DGL++W AIK WVTDY + YY + D +LQAWW E+R VGHGDKK+EPWW ++TP++LI+ TTI+W+ S HA VNFGQY Y GY PNRPT +R + P +++ + P+ A L Sbjct: 610 RGVAVEDSSSPHGVRLLIDDYPYAVDGLEIWSAIKSWVTDYCSFYYGSNEEILKDNELQAWWKEVREVGHGDKKNEPWWAEMETPQELIDSCTTIIWIASALHAAVNFGQYPYAGYLPNRPTVSRKFM--PEPGTPEYEELKKNPDKAFL 757
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOX5_ARATH (Lipoxygenase 5, chloroplastic OS=Arabidopsis thaliana GN=LOX5 PE=1 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 2.974e-44 Identity = 74/125 (59.20%), Postives = 95/125 (76.00%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTAR 383 RG+AVEDP++ +G+K IEDYPFA DGL++W AIK WVT+Y YY + VQ+D ++Q+WWTE+RT GHGDK+HE WWP ++T DLIE T I+W+ S HA VNFGQY Y G+ PNRPT +R Sbjct: 631 RGVAVEDPNSDNGVKLLIEDYPFAVDGLEIWSAIKTWVTEYCTFYYNNDKTVQTDTEIQSWWTELRTKGHGDKRHESWWPSMQTRDDLIETCTIIIWIASALHAAVNFGQYPYAGFLPNRPTVSR 755
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOXX_SOYBN (Seed lipoxygenase OS=Glycine max GN=LOX1.4 PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 4.295e-43 Identity = 81/150 (54.00%), Postives = 101/150 (67.33%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTARCNIATENPSDEQWKFFLEKPENALL 458 RGLA+EDPSAPHGL+ IEDYP+A DGL++WDAIK WV +YV+ YYP + VQ D +LQAWW E GHGD K +PWWP ++T +DLI+ + IVW S HA VNFGQY Y G NRPT AR I E ++ ++ P+ A L Sbjct: 614 RGLAIEDPSAPHGLRLVIEDYPYAVDGLEIWDAIKTWVHEYVSLYYPTDAAVQQDTELQAWWKEAVEKGHGDLKEKPWWPKMQTTEDLIQSCSIIVWTASALHAAVNFGQYPYGGLILNRPTLARRFIPAE--GTPEYDEMVKNPQKAYL 761
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOXB_PHAVU (Lipoxygenase (Fragment) OS=Phaseolus vulgaris PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 7.326e-43 Identity = 71/125 (56.80%), Postives = 95/125 (76.00%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTAR 383 RG+AV+DPSAPHG+K IEDYP+A+DGL++WDAIK WV +YV YY ++Q D +LQAWW E+ VGHGD K +PWWP +++ ++L+E+ TT++W+ S HA VNFGQY Y G NRPT +R Sbjct: 496 RGVAVKDPSAPHGVKLVIEDYPYASDGLEIWDAIKSWVVEYVAFYYKSDEVLQQDSELQAWWKELVQVGHGDLKDKPWWPKMQSRENLVEVSTTLIWIASALHAAVNFGQYPYGGLILNRPTISR 620 The following BLAST results are available for this feature:
BLAST of CX305572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CX305572 ID=CX305572; Name=CX305572; organism=Citrus clementina; type=EST; length=463bpback to top |