CX305786
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX305786 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 1.151e-35 Identity = 69/110 (62.73%), Postives = 80/110 (72.73%), Query Frame = -3 Query: 9 GDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDP--NYPC 332 GD G L II + F+ LL++RND RCPA FYTY+AFI AAK FP FGN+G++ MRKREIAAF QT HETTGGWPDAP G YAWGYC+ +E+ YCDP NY C Sbjct: 84 GDDGYLSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEINC--QPYCDPSSNYQC 191
BLAST of CX305786 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 5.713e-35 Identity = 67/110 (60.91%), Postives = 81/110 (73.64%), Query Frame = -3 Query: 9 GDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPC 332 G G+L IISR F+D+L++RND CPAR FYTYDAFI AAK+FP FG +G+ RK+EIAAFF QT HETTGGW AP G Y+WGYCF +E SS+YC P+ +PC Sbjct: 66 GPTGDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQN-PSSNYCSPSAEWPC 174
BLAST of CX305786 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.171e-34 Identity = 65/107 (60.75%), Postives = 82/107 (76.64%), Query Frame = -3 Query: 9 GELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPC 323 G++G++I+R MF D+L++RN+ CP + FYTYDAFI AAKAFP FG +G+ T RKREIAAF AQT HETTGGW AP G YAWGYC+ RE G+ + YC P+ +PC Sbjct: 63 GDIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGA-YCVPSAQWPC 168
BLAST of CX305786 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.835e-34 Identity = 66/108 (61.11%), Postives = 81/108 (75.00%), Query Frame = -3 Query: 9 GGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPC 326 GG+LG IIS MF+ +L++RND C + FY+Y+AFI AA++FP FG SG+ T RKREIAAFFAQT HETTGGW AP G YAWGYC+ RE G + DYC P+ +PC Sbjct: 72 GGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQG-SPGDYCTPSGQWPC 178
BLAST of CX305786 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 2.835e-34 Identity = 66/108 (61.11%), Postives = 81/108 (75.00%), Query Frame = -3 Query: 9 GGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPC 326 GG+LG IIS MF+ +L++RND C + FY+Y+AFI AA++FP FG SG+ T RKREIAAFFAQT HETTGGW AP G YAWGYC+ RE G + DYC P+ +PC Sbjct: 77 GGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQG-SPGDYCTPSGQWPC 183
BLAST of CX305786 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 143.28 bits (360), Expect = 3.703e-34 Identity = 65/110 (59.09%), Postives = 81/110 (73.64%), Query Frame = -3 Query: 9 GDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPC 332 G G+L IIS F+D+L++RND CPAR FYTY+AFI AAK+FP FG +G+ RK+E+AAFF QT HETTGGW AP G Y+WGYCF +E A SDYC+P+ +PC Sbjct: 81 GPTGDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPA-SDYCEPSATWPC 189
BLAST of CX305786 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.077e-33 Identity = 64/103 (62.14%), Postives = 79/103 (76.70%), Query Frame = -3 Query: 9 KIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPC 311 KIISR MF+ +L++RN+ CPA+ FYTYDAF+ AAK+FP+FG +G+ +RKRE+AAF QT HETTGGWP AP G YAWGYCF +E SS+YC P YPC Sbjct: 4 KIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERN-PSSNYCAPSPRYPC 105
BLAST of CX305786 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.838e-33 Identity = 69/112 (61.61%), Postives = 82/112 (73.21%), Query Frame = -3 Query: 9 GDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTG--GWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPC 332 GD G L +I+R+ F+ +L +RND CPAR FYTYDAFI AAK+FPAF +G++ RKRE+AAF AQT HETTG GW AP G Y WGYC+NRE+ A DYC DPNYPC Sbjct: 67 GDTGGLDSLITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAFLAQTSHETTGGAGWA-APDGPYTWGYCYNRELNPA--DYCQWDPNYPC 175
BLAST of CX305786 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.400e-33 Identity = 65/110 (59.09%), Postives = 79/110 (71.82%), Query Frame = -3 Query: 9 GDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPC 332 G GG+LG IS MF+ +L++RN+ C + FY+Y+AFI AA++FP FG SG+ RKREIAAFFAQT HETTGGW AP G YAWGYCF RE G DYC P+ +PC Sbjct: 74 GPGGDLGSAISNSMFDQMLKHRNENSCQGKNFYSYNAFINAARSFPGFGTSGDINARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERG-NPGDYCPPSSQWPC 182
BLAST of CX305786 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 6.984e-33 Identity = 66/111 (59.46%), Postives = 80/111 (72.07%), Query Frame = -3 Query: 9 GDGGELGKIISRKMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPC 332 G G+LG +IS MF+ +L +RND C + FY+Y+AFI AA +FP FG +G+ T RKREIAAFFAQT HETTGGWP AP G YAWGYCF RE G + DYC P+ +PC Sbjct: 63 GPSGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQG-SPGDYCTPSSQWPC 172 The following BLAST results are available for this feature:
BLAST of CX305786 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CX305786 ID=CX305786; Name=CX305786; organism=Citrus clementina; type=EST; length=334bpback to top |