CX306418
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.123e-30 Identity = 66/133 (49.62%), Postives = 92/133 (69.17%), Query Frame = -1 Query: 123 GITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNP--SERDSLYGPFPELISPEKPARFRQLTYTDYVTRFFTKQLDGKTLVNYYRL 515 G+T H+D LTILLQD GGLQ+ H + WVDV PVPGALV+N+GD+LQ+++ND++ISVEHRVLAN + PRIS+A FF+ +YGP E++S E P +R T T+Y + +K DG + + Y ++ Sbjct: 234 GLTKHSDNSFLTILLQDHIGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANVA-GPRISVACFFSSYLMANPRVYGPIKEILSEENPPNYRDTTITEYAKFYRSKGFDGTSGLLYLKI 365
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.916e-30 Identity = 63/133 (47.37%), Postives = 90/133 (67.67%), Query Frame = -1 Query: 123 GITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFF--NPSERDSLYGPFPELISPEKPARFRQLTYTDYVTRFFTKQLDGKTLVNYYRL 515 G HTD G +TILLQDD GGLQ+ H WVDV P PG+LV+NIGD LQ++SND+Y+SVEHR ++N ++ R+SI FF +P + LYGP EL+S + P ++R T D+ + + LDG + ++ Y++ Sbjct: 232 GTIQHTDIGFVTILLQDDMGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQLLSNDKYLSVEHRAISN-NVGSRMSITCFFGESPYQSSKLYGPITELLSEDNPPKYRATTVKDHTSYLHNRGLDGTSALSRYKI 363
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 3.059e-28 Identity = 60/133 (45.11%), Postives = 88/133 (66.17%), Query Frame = -1 Query: 123 GITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDS--LYGPFPELISPEKPARFRQLTYTDYVTRFFTKQLDGKTLVNYYRL 515 G + H+D LT+LL D GLQ++ W DV V GAL+INIGD+LQ+++ND++IS+EHRVLAN + R+S+A FF R + +YGP EL+S E P ++R+ T DY T F K LDG + + ++++ Sbjct: 237 GTSQHSDNSFLTVLLPDQIEGLQVRREGHWFDVPHVSGALIINIGDLLQLITNDKFISLEHRVLANRATRARVSVACFFTTGVRPNPRMYGPIRELVSEENPPKYRETTIKDYATYFNAKGLDGTSALLHFKI 369
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 1.518e-27 Identity = 65/137 (47.45%), Postives = 91/137 (66.42%), Query Frame = -1 Query: 123 GITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDS------LYGPFPELISPEKPARFRQLTYTDYVTRFFTKQLDGKTLVNYYRL 515 G + H+D G LTIL+QD GGLQI +W+DV +PGALVINI D+LQ+++ND++ SVEHRVLAN + PRIS+AV F + LYGP ELIS E P ++++T D++T F K+ D + ++ +RL Sbjct: 264 GTSKHSDSGFLTILMQDQIGGLQILLENQWIDVPFIPGALVINIADLLQLITNDKFKSVEHRVLAN-KVGPRISVAVAFGIKTQTQEGVSPRLYGPIKELISEENPPIYKEVTVKDFITIRFAKRFDDSSSLSPFRL 399
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 6.377e-26 Identity = 58/124 (46.77%), Postives = 83/124 (66.94%), Query Frame = -1 Query: 150 GITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDS--LYGPFPELISPEKPARFRQLTYTDYVTRFFTKQLDG 515 G + H+D LT+LL D+ GLQ+ W DV VPGAL+INIGD+LQ+++ND++IS++HRVLAN + R+S+A FF+ + + +YGP EL+S E P ++R+ T DY T F K L G Sbjct: 237 GTSKHSDGSFLTVLLPDNIEGLQVCREGYWFDVPHVPGALIINIGDLLQLITNDKFISLKHRVLANRATRARVSVACFFHTHVKPNPRVYGPIKELVSEENPPKYRETTIRDYATYFNGKGLGG 360
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.165e-25 Identity = 58/136 (42.65%), Postives = 88/136 (64.71%), Query Frame = -1 Query: 123 GITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFF-----NPSERDSLYGPFPELISPEKPARFRQLTYTDYVTRFFTKQLDGKTLVNYYRL 515 G HTD LTILL D+ GGLQ+ + W+DV P P AL+ N+GD LQ++SND+++S+EHR+LAN EPRIS+A FF +PS R +YGP EL+S P ++R T ++ + ++ +G + +++ R+ Sbjct: 227 GGAQHTDRSFLTILLNDNNGGLQVLYDGYWIDVPPNPEALIFNVGDFLQLISNDKFVSMEHRILANGGEEPRISVACFFVHTFTSPSSR--VYGPIKELLSELNPPKYRDTT-SESSNHYVARKPNGNSSLDHLRI 359
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 3.869e-23 Identity = 58/132 (43.94%), Postives = 85/132 (64.39%), Query Frame = -1 Query: 123 GITSHTDPGPLTILLQ-DDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQLTYTDYVTRFFTKQLDGKTLVNYYRL 515 G+T H+D LT+L+Q +D GLQIK +WV VKP+P A ++NIGD+L+I++N Y S+EHR + NS E R+SIA F N + GP L+ +K ARF++LT +Y F++ LDGK ++ R+ Sbjct: 229 GLTPHSDSVGLTVLMQVNDVEGLQIKKDGKWVPVKPLPNAFIVNIGDVLEIITNGTYRSIEHRGVVNSEKE-RLSIATFHNVGMYKEV-GPAKSLVERQKVARFKRLTMKEYNDGLFSRTLDGKAYLDALRI 358
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 5.053e-23 Identity = 56/132 (42.42%), Postives = 88/132 (66.67%), Query Frame = -1 Query: 123 GITSHTDPGPLTILLQ-DDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQLTYTDYVTRFFTKQLDGKTLVNYYRL 515 G++ H+D LT+L+Q ++ GL IK E+WV +KP+ GA V+NIGD+++IMSN Y S+EHR + N+ E R+SIA F +P E + GP P+L+ E +++ + Y DY+ R +LDGK+L++ +L Sbjct: 224 GLSPHSDATGLTLLIQVNEVNGLHIKKDEKWVPIKPILGAFVVNIGDVIEIMSNGIYKSIEHRAVINTDKE-RLSIAAFHDP-EYGTKIGPLPDLVK-ENGVKYKTIDYEDYLIRSSNIKLDGKSLLDQMKL 352
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 6.177e-21 Identity = 54/128 (42.19%), Postives = 79/128 (61.72%), Query Frame = -1 Query: 147 GITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELI----SPEKPARFRQLTYTDYVTRFFTKQLDGK 515 G+ +HTD G + +L QDDK GLQ+ EWVDV PV ++V+N+GD L++++N +Y SVEHRVL+ + E R+SIA F+NP DS+ P PELI EK + + + DY+ + + K Sbjct: 173 GLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPVKHSIVVNLGDQLEVITNGKYKSVEHRVLSQTDGEGRMSIASFYNPGS-DSVIFPAPELIGKEAEKEKKENYPRFVFEDYMKLYSAVKFQAK 299
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.595e-19 Identity = 49/112 (43.75%), Postives = 70/112 (62.50%), Query Frame = -1 Query: 180 GITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQLTYTDYV 515 G+ +HTD +TIL+ ++ GLQ+ + W DVK +P AL+I+IGD ++IMSN +Y SV HR N + R+S VF P + L GP +LI+ E PA+F+ Y DYV Sbjct: 219 GVVAHTDMSAITILVPNEVQGLQVHKDDHWYDVKYIPNALIIHIGDQIEIMSNGKYKSVYHRTTVNKD-KTRMSWPVFLEPPP-ELLTGPISKLITDENPAKFKTKKYKDYV 328 The following BLAST results are available for this feature:
BLAST of CX306418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306418 ID=CX306418; Name=CX306418; organism=Citrus clementina; type=EST; length=515bpback to top |