CX308557
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308557 vs. ExPASy Swiss-Prot
Match: ZIP5_ARATH (Zinc transporter 5 OS=Arabidopsis thaliana GN=ZIP5 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 9.568e-43 Identity = 85/132 (64.39%), Postives = 100/132 (75.76%), Query Frame = 2 Query: 2 SESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPXXXXXXXXXSSFYDENDPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQDNKRLQFGAHVSLLLGAGCMSLLAKWA 397 S+SP T K L AAL FHQ FEG+GLGGCI Q F + I+++FFS+TTP SS YD++ PTALIV+G+ NAA+AGILIYMSLVD LAADFM+PKMQ N RLQ AH+SLL+GAG MSLLAKWA Sbjct: 229 SQSPDTAKALFAALMFHQCFEGLGLGGCIAQGNFNCMSITIMSIFFSVTTPVGIAVGMAISSSYDDSSPTALIVQGVLNAASAGILIYMSLVDFLAADFMHPKMQSNTRLQIMAHISLLVGAGVMSLLAKWA 360
BLAST of CX308557 vs. ExPASy Swiss-Prot
Match: ZIP3_ARATH (Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 8.955e-41 Identity = 83/132 (62.88%), Postives = 98/132 (74.24%), Query Frame = 2 Query: 2 SESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPXXXXXXXXXSSFYDENDPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQDNKRLQFGAHVSLLLGAGCMSLLAKWA 397 S+SP K L AL FHQ FEG+GLGGCI Q KFK V I++ FF++TTP ++ YDE+ PTALIV+G+ NAA+AGILIYMSLVDLLAADF +PKMQ N LQ AH++LLLGAG MSLLAKWA Sbjct: 208 SQSPDAAKALFIALMFHQCFEGLGLGGCIAQGKFKCLSVTIMSTFFAITTPIGIVVGMGIANSYDESSPTALIVQGVLNAASAGILIYMSLVDLLAADFTHPKMQSNTGLQIMAHIALLLGAGLMSLLAKWA 339
BLAST of CX308557 vs. ExPASy Swiss-Prot
Match: ZIP1_ARATH (Zinc transporter 1 OS=Arabidopsis thaliana GN=ZIP1 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.133e-35 Identity = 78/134 (58.21%), Postives = 97/134 (72.39%), Query Frame = 2 Query: 2 SESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPXXXXXXXXXSSF--YDENDPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQDNKRLQFGAHVSLLLGAGCMSLLAKWA 397 S+S TIKPL+AAL+FHQFFEG+GLGGCI+ A KS+ ++A FFS+T P SS Y + A++VEG+ NAA+AGILIYMSLVDLLA DFMNP++Q N L A++SL+LGAG MSLLA WA Sbjct: 222 SQSIDTIKPLMAALSFHQFFEGLGLGGCISLADMKSKSTVLMATFFSVTAPLGIGIGLGMSSGLGYRKESKEAIMVEGMLNAASAGILIYMSLVDLLATDFMNPRLQSNLWLHLAAYLSLVLGAGSMSLLAIWA 355
BLAST of CX308557 vs. ExPASy Swiss-Prot
Match: ZIP4_ARATH (Zinc transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ZIP4 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 2.524e-35 Identity = 71/132 (53.79%), Postives = 98/132 (74.24%), Query Frame = 2 Query: 2 SESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPXXXXXXXXXSSFYDENDPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQDNKRLQFGAHVSLLLGAGCMSLLAKWA 397 S+SP TI+PL+AAL+FHQFFEG LGGCI+QA+F+++ I+A FF+LTTP +S ++ + P AL+ EGI ++ +AGIL+YM+LVDL+AADF++ +M N RLQ ++V L LGAG MS LA WA Sbjct: 243 SQSPCTIRPLIAALSFHQFFEGFALGGCISQAQFRNKSATIMACFFALTTPLGIGIGTAVASSFNSHSPGALVTEGILDSLSAGILVYMALVDLIAADFLSKRMSCNLRLQVVSYVMLFLGAGLMSALAIWA 374
BLAST of CX308557 vs. ExPASy Swiss-Prot
Match: IRT3_ARATH (Fe(2+) transport protein 3, chloroplastic OS=Arabidopsis thaliana GN=IRT3 PE=2 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 1.253e-34 Identity = 71/132 (53.79%), Postives = 98/132 (74.24%), Query Frame = 2 Query: 2 SESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPXXXXXXXXXSSFYDENDPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQDNKRLQFGAHVSLLLGAGCMSLLAKWA 397 S+SP TI+PL+AAL+FHQFFEG LGGCI+QA+F+++ I+A FF+LTTP +S ++ + AL+ EGI ++ +AGIL+YM+LVDL+AADF++ KM+ N RLQ ++V L LGAG MS LA WA Sbjct: 258 SQSPCTIRPLIAALSFHQFFEGFALGGCISQAQFRNKSATIMACFFALTTPIGIGIGTAVASSFNSHSVGALVTEGILDSLSAGILVYMALVDLIAADFLSTKMRCNFRLQIVSYVMLFLGAGLMSSLAIWA 389
BLAST of CX308557 vs. ExPASy Swiss-Prot
Match: ZIP12_ARATH (Probable zinc transporter 12 OS=Arabidopsis thaliana GN=ZIP12 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.790e-34 Identity = 71/132 (53.79%), Postives = 92/132 (69.70%), Query Frame = 2 Query: 2 SESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPXXXXXXXXXSSFYDENDPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQDNKRLQFGAHVSLLLGAGCMSLLAKWA 397 S S TIKPL+AA+TFHQ FEG GLGGCI++AKF+ + + ++ +FF+LT P + Y+EN P AL V G NA A+GILIYM+LVDL+A FMN K Q + ++Q VSL++GAG MSLLA WA Sbjct: 224 SPSVSTIKPLIAAITFHQLFEGFGLGGCISEAKFRVKKIWVMLMFFALTAPIGIGIGIGVAEIYNENSPMALKVSGFLNATASGILIYMALVDLVAPLFMNQKTQSSMKIQVACSVSLVVGAGLMSLLAIWA 355
BLAST of CX308557 vs. ExPASy Swiss-Prot
Match: ZIP10_ARATH (Probable zinc transporter 10 OS=Arabidopsis thaliana GN=ZIP10 PE=2 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 1.809e-33 Identity = 72/127 (56.69%), Postives = 92/127 (72.44%), Query Frame = 2 Query: 17 TIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPXXXXXXXXXSSFYDENDPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQDNKRLQFGAHVSLLLGAGCMSLLAKWA 397 TIK LVAAL FHQ FEGMGLGGCI QA++ A++A FF++TTP S Y EN P +LI G+ NA++AG+LIYM+LVDLLAADFM KMQ + +LQ ++ ++LLGAG MS++AKWA Sbjct: 238 TIKGLVAALCFHQMFEGMGLGGCILQAEYGWVKKAVMAFFFAVTTPFGVVLGMALSKTYKENSPESLITVGLLNASSAGLLIYMALVDLLAADFMGQKMQRSIKLQLKSYAAVLLGAGGMSVMAKWA 364
BLAST of CX308557 vs. ExPASy Swiss-Prot
Match: IRT1_ARATH (Fe(2+) transport protein 1 OS=Arabidopsis thaliana GN=IRT1 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.809e-33 Identity = 68/127 (53.54%), Postives = 91/127 (71.65%), Query Frame = 2 Query: 17 TIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPXXXXXXXXXSSFYDENDPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQDNKRLQFGAHVSLLLGAGCMSLLAKWA 397 TIK L+AAL FHQ FEGMGLGGCI QA++ + ++A FF++TTP S+ Y +N P ALI G+ NA +AG+LIYM+LVDLLAA+FM PK+Q + ++QF ++ LLG G MS++AKWA Sbjct: 213 TIKGLIAALCFHQMFEGMGLGGCILQAEYTNMKKFVMAFFFAVTTPFGIALGIALSTVYQDNSPKALITVGLLNACSAGLLIYMALVDLLAAEFMGPKLQGSIKMQFKCLIAALLGCGGMSIIAKWA 339
BLAST of CX308557 vs. ExPASy Swiss-Prot
Match: ZIP8_ARATH (Probable zinc transporter 8 OS=Arabidopsis thaliana GN=ZIP8 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 5.818e-32 Identity = 69/127 (54.33%), Postives = 88/127 (69.29%), Query Frame = 2 Query: 17 TIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPXXXXXXXXXSSFYDENDPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQDNKRLQFGAHVSLLLGAGCMSLLAKWA 397 TIK L+AAL FHQ FEGMGLGGCI QA++ + ++A FF++TTP SS Y +N PTALI G+ NA +AG+LIYM+LVDLLAA+FM +Q + +LQ + LLG G MS+LAKWA Sbjct: 221 TIKGLIAALCFHQMFEGMGLGGCILQAEYTNVKKFVMAFFFAVTTPSGIALGIALSSVYKDNSPTALITVGLLNACSAGLLIYMALVDLLAAEFMGSMLQRSVKLQLNCFGAALLGCGGMSVLAKWA 347
BLAST of CX308557 vs. ExPASy Swiss-Prot
Match: ZIP9_ARATH (Zinc transporter 9 OS=Arabidopsis thaliana GN=ZIP9 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 3.771e-31 Identity = 65/132 (49.24%), Postives = 91/132 (68.94%), Query Frame = 2 Query: 2 SESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPXXXXXXXXXSSFYDENDPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQDNKRLQFGAHVSLLLGAGCMSLLAKWA 397 S SP TI+PL+ AL+FHQFFEG LGGC+ +A+ RG A++A FF++TTP +S Y+ AL+ EG+ ++ +AGIL+YM+LVDL+AADF++ KM + R+Q ++ L LGAG MS LA WA Sbjct: 213 SHSPCTIRPLLLALSFHQFFEGFALGGCVAEARLTPRGSAMMAFFFAITTPIGVAVGTAIASSYNSYSVAALVAEGVLDSLSAGILVYMALVDLIAADFLSKKMSVDFRVQVVSYCFLFLGAGMMSALAIWA 344 The following BLAST results are available for this feature:
BLAST of CX308557 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308557 ID=CX308557; Name=CX308557; organism=Citrus clementina; type=EST; length=461bpback to top |