CX309099
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX309099 vs. ExPASy Swiss-Prot
Match: NDH_DICDI (Probable NADH dehydrogenase OS=Dictyostelium discoideum GN=DDB_G0270104 PE=3 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 4.490e-25 Identity = 64/146 (43.84%), Postives = 91/146 (62.33%), Query Frame = -3 Query: 1 EFRSVAEPVSRIQTSLSSDPNSYFYL-ASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLSENPGISEEERKRLLHCVAIGGGPTGVEFSGELSDFIMRD 435 EFRS+AEPV + D N + Y+ AS I+ + + V ++ H F++ YDKLVI G+ TFGIKGV+ENA FL+E++HA+EIR+K++ + P +S EER+RLL V +GGG TG+EF+ EL+DF D Sbjct: 89 EFRSIAEPVRTTR-----DINEFKYIQASVTSINPENNSVLVKST-----FHNEKPFEMKYDKLVIGVGSRNNTFGIKGVEENANFLKELHHAREIRQKIIECFERASLPDVSTEERERLLSFVIVGGGATGIEFTSELNDFFSED 224
BLAST of CX309099 vs. ExPASy Swiss-Prot
Match: NDH2_YEAST (External NADH-ubiquinone oxidoreductase 2, mitochondrial OS=Saccharomyces cerevisiae GN=NDE2 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.653e-19 Identity = 56/146 (38.36%), Postives = 83/146 (56.85%), Query Frame = -3 Query: 1 EFRSVAEPVSRIQTSLSSDPNSYFYL-ASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLSENPGISEEERKRLLHCVAIGGGPTGVEFSGELSDFIMRD 435 E +S+ EPV I P Y+ A + +D +V ++V+ E ++YD LV++ GA+ TF I GV NA FL+E+ AQ IR KL+ + + + +++ ERKRLL V +GGGPTGVEF+ EL D+I +D Sbjct: 147 EMKSIVEPVRSIARRT---PGEVHYIEAEALDVDPKAKKVMVQSVSED----EYFVSSLSYDYLVVSVGAKTTTFNIPGVYGNANFLKEIEDAQNIRMKLMKTIEQASSFPVNDPERKRLLTFVVVGGGPTGVEFAAELQDYINQD 285
BLAST of CX309099 vs. ExPASy Swiss-Prot
Match: NDI1_YEAST (Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial OS=Saccharomyces cerevisiae GN=NDI1 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.682e-19 Identity = 55/152 (36.18%), Postives = 87/152 (57.24%), Query Frame = -3 Query: 1 RSVAEPVSRIQTSLSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEP------HQFKVA---YDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLSENPGISEEERKRLLHCVAIGGGPTGVEFSGELSDFIMRD 429 +S+ EP+ + +L N +Y A I+ D++ V ++++ ++P HQ + A YD L+ A GAEP TFGI GV + +FL+E+ ++ EIR+ NL + + ER+RLL V +GGGPTGVE +GEL D++ +D Sbjct: 105 KSIIEPI--VNFALKKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQD 254
BLAST of CX309099 vs. ExPASy Swiss-Prot
Match: NDH1_YEAST (External NADH-ubiquinone oxidoreductase 1, mitochondrial OS=Saccharomyces cerevisiae GN=NDE1 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.808e-19 Identity = 51/145 (35.17%), Postives = 82/145 (56.55%), Query Frame = -3 Query: 1 EFRSVAEPVSRIQTSLSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLSENPGISEEERKRLLHCVAIGGGPTGVEFSGELSDFIMRD 435 E +S+ EPV I + S ++Y A +D + + ++ + + + YD LV+ GA+P TFG GV E + FL+E++ AQEIR K++ ++ + + + ER RLL V +GGGPTGVEF+ EL D++ +D Sbjct: 162 ELKSIVEPVRTI--ARRSHGEVHYYEAEAYDVDPENKTIKVKS----SAKNNDYDLDLKYDYLVVGVGAQPNTFGTPGVYEYSSFLKEISDAQEIRLKIMSSIEKAASLSPKDPERARLLSFVVVGGGPTGVEFAAELRDYVDQD 300
BLAST of CX309099 vs. ExPASy Swiss-Prot
Match: NDH1_SCHPO (Probable NADH-ubiquinone oxidoreductase C3A11.07, mitochondrial OS=Schizosaccharomyces pombe GN=SPAC3A11.07 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.071e-18 Identity = 52/143 (36.36%), Postives = 80/143 (55.94%), Query Frame = -3 Query: 1 RSVAEPVSRIQTSLSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLSENPGISEEERKRLLHCVAIGGGPTGVEFSGELSDFIMRD 429 RS+ +P+ + S FY A C +D DK ++ + + E ++ YD LV + GAE TF I G+ E FL+E+ AQ+IR ++L L ++ + E R+R +H V +GGGPTG+EF+GE++DFI D Sbjct: 143 RSIVQPIRYMLRHKSCYVK--FYEAECTDVDADKKVIHIKKTTTDGVDLEQ---EIKYDYLVCSHGAETQTFNIPGIAEYGCFLKEIWDAQKIRARILHCLEQAQFKDLPAETRRRYVHTVVVGGGPTGMEFAGEMADFIEDD 280
BLAST of CX309099 vs. ExPASy Swiss-Prot
Match: NDH2_SCHPO (Probable NADH-ubiquinone oxidoreductase C947.15c, mitochondrial OS=Schizosaccharomyces pombe GN=SPBC947.15c PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.943e-18 Identity = 53/143 (37.06%), Postives = 81/143 (56.64%), Query Frame = -3 Query: 1 SVAEPVSRIQTSLSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNL-MLSENPGISEEERKRLLHCVAIGGGPTGVEFSGELSDFIMRD 426 S+ EP+ + DP++ + A C IDT +V T+ ++E + + YD LV A GA TFGI+GV+++ FL+E A+++ ++ L + N +S EER RLLH +GGGPTG+EF+ E+ DFI D Sbjct: 143 SITEPIVALFKG-KIDPSN-IHQAECTAIDTSAKKV---TIRGTTEANEGKEAVIPYDTLVFAIGAGNQTFGIQGVRDHGCFLKEAGDAKKVFNRIFEILEQVRFNKDLSPEERARLLHITVVGGGPTGMEFAAEMQDFIDND 280 The following BLAST results are available for this feature:
BLAST of CX309099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX309099 ID=CX309099; Name=CX309099; organism=Citrus clementina; type=EST; length=437bpback to top |