DY256862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY256862 vs. ExPASy Swiss-Prot
Match: CSN5A_ARATH (COP9 signalosome complex subunit 5a OS=Arabidopsis thaliana GN=CSN5A PE=1 SV=1) HSP 1 Score: 456.062 bits (1172), Expect = 1.122e-130 Identity = 222/265 (83.77%), Postives = 239/265 (90.19%), Query Frame = 3 Query: 90 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSL*CHLLDLLGNKYWVNTLFSSPCLVMG 884 S+IA+KTWELEN+I+++++P S SD IF+YD+ +QT+FQQEKPW NDPHYFKRVKISALALLKMVVHARSGGTIE+MGLMQGKTDGD IIVMDAFALPVEGTETRVNAQ DAYEYMV+YSQTNK AGRLEN VGWYHSHPGYGCWLSGIDVSTQ LNQQ QEPFLAVVIDPTRTVSAGKVEIGAFRTY +GYKPPDEP+SEYQTIPLNKIEDFGVHCKQYYSLD+TYFKSSL HLLDLL NKYWVNTL SSP L G Sbjct: 6 STIARKTWELENSILTVDSPD-------STSDNIFYYDDTSQTRFQQEKPWENDPHYFKRVKISALALLKMVVHARSGGTIEIMGLMQGKTDGDTIIVMDAFALPVEGTETRVNAQDDAYEYMVEYSQTNKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQRLNQQHQEPFLAVVIDPTRTVSAGKVEIGAFRTYSKGYKPPDEPVSEYQTIPLNKIEDFGVHCKQYYSLDVTYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNG 263 HSP 2 Score: 33.113 bits (74), Expect = 1.122e-130 Identity = 19/49 (38.78%), Postives = 26/49 (53.06%), Query Frame = 2 Query: 866 PLLGNGDYVPGQFRILPKNWNKLKINWPHSPFGPLKTPPPKRKEKNSKS 1012 PLLGNGDYV GQ L + + + + S FG + P K+K +S Sbjct: 258 PLLGNGDYVAGQISDLAEKLEQAESHLVQSRFGGV-VPSSLHKKKEDES 305
BLAST of DY256862 vs. ExPASy Swiss-Prot
Match: CSN5B_ARATH (COP9 signalosome complex subunit 5b OS=Arabidopsis thaliana GN=CSN5B PE=1 SV=2) HSP 1 Score: 442.195 bits (1136), Expect = 2.769e-126 Identity = 219/265 (82.64%), Postives = 238/265 (89.81%), Query Frame = 3 Query: 90 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSL*CHLLDLLGNKYWVNTLFSSPCLVMG 884 S+IA+KTWELENNI+ +E PT+S ASD+IF YD+ +Q K QQEKPW +DP+YFKRV ISALALLKMVVHARSGGTIE+MGLMQGKT+GD IIVMDAFALPVEGTETRVNAQ+DAYEYMV+YSQT+K AGRLEN VGWYHSHPGYGCWLSGIDVSTQMLNQQ+QEPFLAVVIDPTRTVSAGKVEIGAFRTYPEG+K D+ +SEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSL HLLDLL NKYWVNTL SSP L G Sbjct: 6 SAIARKTWELENNILPVE--PTDS-----ASDSIFHYDDASQAKIQQEKPWASDPNYFKRVHISALALLKMVVHARSGGTIEIMGLMQGKTEGDTIIVMDAFALPVEGTETRVNAQSDAYEYMVEYSQTSKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGHKISDDHVSEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNG 263 HSP 2 Score: 32.3426 bits (72), Expect = 2.769e-126 Identity = 19/68 (27.94%), Postives = 32/68 (47.06%), Query Frame = 2 Query: 866 PLLGNGDYVPGQFRILPKNWNKLKINWPHSPFGPLKTPPPKRKEKNSKSAKNPLGTVQKKTFKQGSGV 1069 PLLGNGDYV GQ L + + + +S +G + +R++++ K T +Q G+ Sbjct: 258 PLLGNGDYVAGQISDLAEKLEQAESQLANSRYGGIAPAGHQRRKEDEPQLAKITRDSAKITVEQVHGL 325
BLAST of DY256862 vs. ExPASy Swiss-Prot
Match: CSN5_XENTR (COP9 signalosome complex subunit 5 OS=Xenopus tropicalis GN=cops5 PE=2 SV=1) HSP 1 Score: 385.185 bits (988), Expect = 4.367e-106 Identity = 187/262 (71.37%), Postives = 212/262 (80.92%), Query Frame = 3 Query: 90 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSL*CHLLDLLGNKYWVNTLFSSPCL 875 SS+AQKTWEL NN+ +++ D I+ YD+ Q + KPW D HYFK K+SALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AYEYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTRT+SAGKV +GAFRTYP+GYKPPDE SEYQTIPLNKIEDFGVHCKQYY+L++TYFKSSL LL+LL NKYWVNTL SS L Sbjct: 6 SSVAQKTWELSNNMQEVQS-----------IDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKVSALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVTYFKSSLDRKLLELLWNKYWVNTLSSSSLL 256
BLAST of DY256862 vs. ExPASy Swiss-Prot
Match: CSN5_XENLA (COP9 signalosome complex subunit 5 OS=Xenopus laevis GN=cops5 PE=2 SV=1) HSP 1 Score: 385.185 bits (988), Expect = 4.367e-106 Identity = 187/262 (71.37%), Postives = 212/262 (80.92%), Query Frame = 3 Query: 90 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSL*CHLLDLLGNKYWVNTLFSSPCL 875 SS+AQKTWEL NN+ +++ D I+ YD+ Q + KPW D HYFK K+SALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AYEYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTRT+SAGKV +GAFRTYP+GYKPPDE SEYQTIPLNKIEDFGVHCKQYY+L++TYFKSSL LL+LL NKYWVNTL SS L Sbjct: 4 SSVAQKTWELSNNMQEVQS-----------IDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKVSALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVTYFKSSLDRKLLELLWNKYWVNTLSSSSLL 254
BLAST of DY256862 vs. ExPASy Swiss-Prot
Match: CSN5_MOUSE (COP9 signalosome complex subunit 5 OS=Mus musculus GN=Cops5 PE=1 SV=3) HSP 1 Score: 381.333 bits (978), Expect = 6.306e-105 Identity = 186/262 (70.99%), Postives = 210/262 (80.15%), Query Frame = 3 Query: 90 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSL*CHLLDLLGNKYWVNTLFSSPCL 875 S +AQKTWEL NN+ + + D I+ YD+ Q + KPW D HYFK KISALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AYEYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTRT+SAGKV +GAFRTYP+GYKPPDE SEYQTIPLNKIEDFGVHCKQYY+L+++YFKSSL LL+LL NKYWVNTL SS L Sbjct: 6 SGMAQKTWELANNM-----------QEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLL 256
BLAST of DY256862 vs. ExPASy Swiss-Prot
Match: CSN5_HUMAN (COP9 signalosome complex subunit 5 OS=Homo sapiens GN=COPS5 PE=1 SV=4) HSP 1 Score: 381.333 bits (978), Expect = 6.306e-105 Identity = 186/262 (70.99%), Postives = 210/262 (80.15%), Query Frame = 3 Query: 90 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSL*CHLLDLLGNKYWVNTLFSSPCL 875 S +AQKTWEL NN+ + + D I+ YD+ Q + KPW D HYFK KISALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AYEYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTRT+SAGKV +GAFRTYP+GYKPPDE SEYQTIPLNKIEDFGVHCKQYY+L+++YFKSSL LL+LL NKYWVNTL SS L Sbjct: 6 SGMAQKTWELANNM-----------QEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLL 256
BLAST of DY256862 vs. ExPASy Swiss-Prot
Match: CSN5_DANRE (COP9 signalosome complex subunit 5 OS=Danio rerio GN=cops5 PE=2 SV=1) HSP 1 Score: 380.563 bits (976), Expect = 1.076e-104 Identity = 186/262 (70.99%), Postives = 210/262 (80.15%), Query Frame = 3 Query: 90 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSL*CHLLDLLGNKYWVNTLFSSPCL 875 SSIA KTWEL +NS + + D I+ YD+ Q + KPW D HYFK K+SALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AYEYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTRT+SAGKV +GAFRTYP+GYKPPDE SEYQTIPLNKIEDFGVHCKQYY+L+++YFKSSL LL+LL NKYWVNTL SS L Sbjct: 4 SSIAMKTWEL-----------SNSMQEVQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKLSALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLL 254
BLAST of DY256862 vs. ExPASy Swiss-Prot
Match: CSN5_DROME (COP9 signalosome complex subunit 5 OS=Drosophila melanogaster GN=CSN5 PE=1 SV=1) HSP 1 Score: 376.326 bits (965), Expect = 2.029e-103 Identity = 185/264 (70.08%), Postives = 210/264 (79.55%), Query Frame = 3 Query: 84 MDSSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSL*CHLLDLLGNKYWVNTLFSSPCL 875 MDS AQKTWELENNI ++ + D IF YD Q + KPW DPH+FK +KISALALLKMV+HARSGGT+EVMGLM GK + + +IVMDAFALPVEGTETRVNAQA AYEYM Y + K+ GR+E+AVGWYHSHPGYGCWLSGIDVSTQMLNQ +QEPF+A+V+DP RTVSAGKV +GAFRTYP+GYKPP+E SEYQTIPLNKIEDFGVHCKQYY L+I+YFKS+L LLD L NKYWVNTL SS L Sbjct: 1 MDSDAAQKTWELENNIQTLPS-----------CDEIFRYDAEQQRQIIDAKPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGLMLGKVEDNTMIVMDAFALPVEGTETRVNAQAQAYEYMTAYMEAAKEVGRMEHAVGWYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVDPVRTVSAGKVCLGAFRTYPKGYKPPNEEPSEYQTIPLNKIEDFGVHCKQYYPLEISYFKSALDRRLLDSLWNKYWVNTLGSSGLL 253
BLAST of DY256862 vs. ExPASy Swiss-Prot
Match: CSN5_DICDI (COP9 signalosome complex subunit 5 OS=Dictyostelium discoideum GN=csn5 PE=1 SV=1) HSP 1 Score: 370.933 bits (951), Expect = 6.646e-102 Identity = 179/257 (69.65%), Postives = 208/257 (80.93%), Query Frame = 3 Query: 99 AQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSL*CHLLDLLGNKYWVNTLFSSP 869 A KT+ELENNI +++ D +F YD +F Q KPW DPHYFK VKISA+ALLKMV+HARSGG +EVMG++ GK + + +I+MD+FALPVEGTETRVNAQ +AYEYMV+Y + KQ GRLENA+GWYHSHPGYGCWLSGIDV TQ +NQQ+ EP+L +VIDPTRTVSAGKVEIGAFRTYP+GYKPP+E SEYQ+IPL+KIEDFGVHCKQYYSL+ITYFKSSL LLD L NKYWVNTL SSP Sbjct: 9 ALKTFELENNIQTID------------HDQLFKYDPQQYQQFLQSKPWSKDPHYFKHVKISAIALLKMVMHARSGGKLEVMGMLMGKVENNTMIIMDSFALPVEGTETRVNAQVEAYEYMVEYLELIKQTGRLENALGWYHSHPGYGCWLSGIDVGTQSVNQQYSEPWLGIVIDPTRTVSAGKVEIGAFRTYPQGYKPPNEGPSEYQSIPLSKIEDFGVHCKQYYSLEITYFKSSLDQQLLDKLWNKYWVNTLSSSP 253 HSP 2 Score: 22.3274 bits (46), Expect = 6.646e-102 Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 1 Query: 901 ISDFT*KLEQAENQLA 948 I+D + KLEQAE QL+ Sbjct: 265 INDLSEKLEQAETQLS 280
BLAST of DY256862 vs. ExPASy Swiss-Prot
Match: CSN5_CAEEL (COP9 signalosome complex subunit 5 OS=Caenorhabditis elegans GN=csn-5 PE=1 SV=1) HSP 1 Score: 349.747 bits (896), Expect = 2.033e-95 Identity = 163/264 (61.74%), Postives = 202/264 (76.52%), Query Frame = 3 Query: 78 VSMDSSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSL*CHLLDLLGNKYWVNTLFSSP 869 V SS+ Q+ WE ENN+ ++ D+IF Y+ Q + + KPW DPHYFK++KISA+ALLKM +HA+ GG +E+MGL+QG+ D ++ I++D FALPVEGTETRVNAQA AYEYM YS+ GR E VGWYHSHPGYGCWLSGIDVSTQ LNQ+FQEP++A+VIDP RT+SAGKV+IGAFRTYPEGY+PPD+ SEYQ+IPL KIEDFGVHCK+YYSLD+++FKS L H+L L N YW++TL SSP Sbjct: 6 VKPSSSVPQRNWEKENNVQNV--------------DSIFEYNNKQQVEIRNAKPWDKDPHYFKQIKISAIALLKMTMHAKRGGNLEIMGLLQGRIDANSFIILDVFALPVEGTETRVNAQAQAYEYMTVYSEMCDTEGRKEKVVGWYHSHPGYGCWLSGIDVSTQTLNQKFQEPWVAIVIDPLRTMSAGKVDIGAFRTYPEGYRPPDDVPSEYQSIPLAKIEDFGVHCKRYYSLDVSFFKSQLDAHILTSLWNSYWISTLSSSP 255 The following BLAST results are available for this feature:
BLAST of DY256862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY256862 ID=DY256862; Name=DY256862; organism=Citrus clementina; type=EST; length=1249bpback to top |