DY256864
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY256864 vs. ExPASy Swiss-Prot
Match: RAV2_ARATH (AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis thaliana GN=RAV2 PE=2 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 1.251e-76 Identity = 163/266 (61.28%), Postives = 196/266 (73.68%), Query Frame = 3 Query: 3 FRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRNY---GLDANGKRVIKHGEGDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGS--TSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGPVENPVEPVQMMRLFGVNIFK---IPGNGLVGVDKIGCNINNNNDGKRLREM-ELLSLECSKNK 773 FRGRDAV NFK + ++GD+ AFL +HSK+EIVDMLRKHTY DELEQ+ + +DANGKR +G +T +D+VLK R+ LFEKAVTPSDVGKLNRLVIPKQHAEKHFPL S S +KG+L+NFEDV GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+AGD+V+F RSTG +RQLYIDWK R+GP ENPV+ V +RLFGV+IF + N +V V C GKR R++ ++ +L CSK + Sbjct: 109 FRGRDAVVNFKNVL------EDGDL--AFLEAHSKAEIVDMLRKHTYADELEQNNKRQLFLSVDANGKR-------NGSSTT-QNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYIDWKVRSGPRENPVQVV--VRLFGVDIFNVTTVKPNDVVAV----CG------GKRSRDVDDMFALRCSKKQ 346
BLAST of DY256864 vs. ExPASy Swiss-Prot
Match: RAVL1_ARATH (AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis thaliana GN=TEM1 PE=1 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 2.359e-75 Identity = 159/268 (59.33%), Postives = 188/268 (70.15%), Query Frame = 3 Query: 3 FRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDGVATA-FGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTS--------KGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGPVENPVEPVQMMRLFGVNIFKIPGN--GLVGVDKIGCNINNNNDGKRLREMELLSLECSKNK 773 FRGRDAVTNFK + D D E AFL +HSK+EIVDMLRKHTY DE EQS+R + ++ +GKR G+ TA +G+D VL+AR+ LFEK VTPSDVGKLNRLVIPKQHAEKHFPL + +T+ KG+L+N ED TGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+AGD+V F RSTG DRQLYI WK R+ PV+ ++RLFGVNIF + V V+ +G KR RE +L SL CSK + Sbjct: 116 FRGRDAVTNFK------SQVDGNDAESAFLDAHSKAEIVDMLRKHTYADEFEQSRRKF-VNGDGKR-------SGLETATYGNDAVLRAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPDRQLYIHWKVRSSPVQT------VVRLFGVNIFNVSNEKPNDVAVECVG--------KKRSREDDLFSLGCSKKQ 355
BLAST of DY256864 vs. ExPASy Swiss-Prot
Match: RAV1_ARATH (AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thaliana GN=RAV1 PE=1 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 2.066e-71 Identity = 153/261 (58.62%), Postives = 184/261 (70.50%), Query Frame = 3 Query: 3 FRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHG--EGDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTS-KGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGPVENPVEPVQMMRLFGVNIF-KIPGNGLVGVDKIGCNINNNNDGKRLREMELLSLECSKNK 773 FR RDAVTNFK + DE +++ FL+SHSKSEIVDMLRKHTYN+ELEQSKR + N R + DGV+T ++ + LFEKAVTPSDVGKLNRLVIPK HAEKHFPL S + S KG+LLNFEDV GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+AGD+VSF RS G D+QLYI WK+R+G + ++ +++RLFGVNI + N +VG KR+ + E+LSL CSK + Sbjct: 106 FRRRDAVTNFKDVKM-----DEDEVD--FLNSHSKSEIVDMLRKHTYNEELEQSKRRRNGNGNMTRTLLTSGLSNDGVSTTG-----FRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIGWKSRSG---SDLDAGRVLRLFGVNISPESSRNDVVG-------------NKRVNDTEMLSLVCSKKQ 338
BLAST of DY256864 vs. ExPASy Swiss-Prot
Match: RAVL4_ARATH (AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thaliana GN=ARF14 PE=2 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 1.484e-61 Identity = 133/220 (60.45%), Postives = 156/220 (70.91%), Query Frame = 3 Query: 3 FRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDGVA-TAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTS---KGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGPVENPVEPVQMMRLFGVNI 650 FRGRDAVTNFK T+ +E E+ FL++HSKSEIVDMLRKHTY +EL+Q KRN D NGK V T F K + LFEK VTPSDVGKLNRLVIPK AEKHFPL G+ + KG+LLNFEDV GKVWRFRYSYWNSSQSYVLTKGWSRFVKEK L AGD++SF RS D++ +I WK+++G +E ++MRLFGV+I Sbjct: 106 FRGRDAVTNFKD-----TTFEE---EVEFLNAHSKSEIVDMLRKHTYKEELDQRKRNR--DGNGKETTAFALASMVVMTGF------KTAELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIGWKSKSG---LDLETGRVMRLFGVDI 306
BLAST of DY256864 vs. ExPASy Swiss-Prot
Match: Y1934_ORYSJ (AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. japonica GN=Os01g0693400 PE=2 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.938e-61 Identity = 132/235 (56.17%), Postives = 157/235 (66.81%), Query Frame = 3 Query: 3 FRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDGVATAFGSDRV-LKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQ---SGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHR---STGGDRQLYIDWK-------ARTGPVENPV-EPVQMMRLFGVNIFKIP 662 FRGRDAVTNF+ ++ A + E+ FL++ SK+E+VDMLRKHTY DEL QSKR + +G ++ S ARD LF+K VTPSDVGKLNRLVIPKQHAEKHFPLQ +G SKG+LLNFED GKVWRFRYSYWNSSQSYVLTKGWSRFVKEK L AGD+V F+R S G D +L+ID K A P + P PV+ +RLFGV++ P Sbjct: 126 FRGRDAVTNFRPLAEA---DPDAAAELRFLATRSKAEVVDMLRKHTYFDELAQSKRTFAASTPSAATTTASLSNGHLSSPRSPFAPAAARDHLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSAGGESKGVLLNFEDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDVVGFYRSAASAGDDGKLFIDCKLVRSTGAALASPADQPAPSPVKAVRLFGVDLLTAP 357
BLAST of DY256864 vs. ExPASy Swiss-Prot
Match: Y5498_ORYSJ (AP2/ERF and B3 domain-containing protein Os05g0549800 OS=Oryza sativa subsp. japonica GN=Os05g0549800 PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 2.218e-57 Identity = 127/249 (51.00%), Postives = 153/249 (61.45%), Query Frame = 3 Query: 3 FRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQ------------------SGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGP---------------VENPVEPVQMMRLFGVNI 650 FRGRDAVTNF+ ++ S E +E+ FL+S SK+E+VDMLRKHTY +EL Q+KR + A KH +++ AR+ LF+K VTPSDVGKLNRLVIPKQHAEKHFPLQ G KG+LLNFED GKVW+FRYSYWNSSQSYVLTKGWSRFVKEK L AGD V F+R+ G + QL+ID K R P P V+ +RLFGV++ Sbjct: 113 FRGRDAVTNFRPLA---ESDPEAAVELRFLASRSKAEVVDMLRKHTYLEELTQNKRAFA--AISPPPPKHPASSPTSSS-------AAREHLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPPPTTTSSVAAAADAAAGGGDCKGVLLNFEDAAGKVWKFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRAAGKNAQLFIDCKVRAKPTTAAAAAAFLSAVAAAAAPPPAVKAIRLFGVDL 349
BLAST of DY256864 vs. ExPASy Swiss-Prot
Match: Y1410_ORYSJ (AP2/ERF and B3 domain-containing protein Os01g0141000 OS=Oryza sativa subsp. japonica GN=Os01g0141000 PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 1.346e-54 Identity = 125/238 (52.52%), Postives = 150/238 (63.03%), Query Frame = 3 Query: 3 FRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQ---------SGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRST-GGDRQLYIDWKARTG------------PVENPVEPVQMMRLFGVNI 650 +RGRDA TNF + + E+AFL++HSK+EIVDMLRKHTY DEL Q ++ G G G A AR+ LFEKAVTPSDVGKLNRLV+PKQHAEKHFPL+ + +T KG+LLNFED GKVWRFRYSYWNSSQSYVLTKGWSRFV+EK L+AGD + F RS G D+ L+ID K P + EP +++RLFGV+I Sbjct: 113 YRGRDAATNFPGAAASAA-------ELAFLAAHSKAEIVDMLRKHTYADELRQG-------------LRRGRGMG---ARAQPTPSWAREPLFEKAVTPSDVGKLNRLVVPKQHAEKHFPLRRAASSDSASAAATGKGVLLNFEDGEGKVWRFRYSYWNSSQSYVLTKGWSRFVREKGLRAGDTIVFSRSAYGPDKLLFIDCKKNNAAAATTTCAGDERPTTSGAEP-RVVRLFGVDI 326
BLAST of DY256864 vs. ExPASy Swiss-Prot
Match: Y1407_ORYSJ (Putative AP2/ERF and B3 domain-containing protein Os01g0140700 OS=Oryza sativa subsp. japonica GN=Os01g0140700 PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 2.011e-50 Identity = 119/226 (52.65%), Postives = 144/226 (63.72%), Query Frame = 3 Query: 3 FRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPL-----QSGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRST---GGDRQLYIDWK--ARTGPVENPVEPVQMMRLFGVNI 650 FRGRDAVTN + + G S+ E +AFL++HSK+E+VDMLRKHTY+DEL+Q R G R AR+ LFEKAVTPSDVGKLNRLV+PKQ AE+HFP S + KG+LLNFED GKVWRFRYSYWNSSQSYVLTKGWSRFV+EK L+ GD V+F RS G ++ L ID K R + +++LFGV+I Sbjct: 111 FRGRDAVTN-RAPAAEGASAGE----LAFLAAHSKAEVVDMLRKHTYDDELQQGLRR------GSRA--------------QPTPRWAREPLFEKAVTPSDVGKLNRLVVPKQQAERHFPFPLRRHSSDAAGKGVLLNFEDGDGKVWRFRYSYWNSSQSYVLTKGWSRFVREKGLRPGDTVAFSRSAAAWGTEKHLLIDCKKMERNNLATVDDDARVVVKLFGVDI 311
BLAST of DY256864 vs. ExPASy Swiss-Prot
Match: NGA1_ARATH (B3 domain-containing transcription factor NGA1 OS=Arabidopsis thaliana GN=NGA1 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 2.015e-42 Identity = 83/122 (68.03%), Postives = 97/122 (79.51%), Query Frame = 3 Query: 252 RVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHR---STGGDRQLYIDWKARTGPVENP 608 R + R+ +F+K VTPSDVGKLNRLVIPKQHAE+ FPL S S KGLLLNFED+TGK WRFRYSYWNSSQSYV+TKGWSRFVK+K L AGDIVSF R +G D +L+IDW+ R ++P Sbjct: 26 REVADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGLLLNFEDLTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRRRPKVPDHP 147
BLAST of DY256864 vs. ExPASy Swiss-Prot
Match: Y2835_ORYSJ (B3 domain-containing protein Os02g0683500 OS=Oryza sativa subsp. japonica GN=Os02g0683500 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 3.217e-40 Identity = 80/126 (63.49%), Postives = 94/126 (74.60%), Query Frame = 3 Query: 219 GDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGD---RQLYIDWKAR 587 G G G + + ++ +F+K VTPSDVGKLNRLVIPKQ+AEK+FPL + + KGLLLNFED GK WRFRYSYWNSSQSYV+TKGWSRFVKEK L AGD VSF R G + +L+IDWK R Sbjct: 76 GSGGGGGGGGEAEVVEKEHMFDKVVTPSDVGKLNRLVIPKQYAEKYFPLDAAANEKGLLLNFEDRAGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFSRGIGDEAARHRLFIDWKRR 201 The following BLAST results are available for this feature:
BLAST of DY256864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >DY256864 ID=DY256864; Name=DY256864; organism=Citrus clementina; type=EST; length=1035bpback to top |