DY256872
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY256872 vs. ExPASy Swiss-Prot
Match: PSD13_DICDI (26S proteasome non-ATPase regulatory subunit 13 OS=Dictyostelium discoideum GN=psmD13 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 1.231e-50 Identity = 108/299 (36.12%), Postives = 172/299 (57.53%), Query Frame = 2 Query: 2 NFITDFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMFKLEQG---DRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQQRVLESPRSN 889 NFI DFE K+ L L + V+RQ+ ++ ++E + +K++ + + + IA L G ++CKK LE K L +T +D VY+++Y VS+ YH + +EFYK AL+YL+Y +E G+N+Y FG+L+A+PI+ +L G++ WL L+AFN GD+ +++ L H + Q A+ N +KL +KI+IL L+E+ F PS+ R+I S IA+ TKL + ++EHLLMKSLS++LI+G IDQ +H++WV R+L+ + N Sbjct: 64 NFIRDFENKLRPLSLVEICIAVARQFDTDESR-KFIETISQKVK-----KDKSAYILTLSYIANMNLRSGVAEQLQDCKKTLELAKEELQGVTGLDTIVYSSFYRVSTDYHMAKSQASEFYKNALMYLSYCKLETISQEEQASLAYNLCIAALVGENVYGFGDLIANPILKALEGSQHNWLIAFLKAFNIGDIQQFEGLMSQHRDIISTQTAITNNMQKLRQKISILSLLELAFRTPSDKRSISFSKIAQATKLPLGEIEHLLMKSLSLNLIKGSIDQTVEIIHITWVTPRILDLNQIN 356
BLAST of DY256872 vs. ExPASy Swiss-Prot
Match: PSD13_RAT (26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus GN=Psmd13 PE=1 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 4.604e-48 Identity = 106/291 (36.43%), Postives = 168/291 (57.73%), Query Frame = 2 Query: 2 NFITDFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQQRVLE 874 NFI++FE ++N L L + V RQ + A+++LE EK++++ +E ++ K I KL GD + K+ +ED + L+++ + SV++ +Y +SS+Y++ A +YK AL +L ++ G+ ++NFGELL HP++ SL T +WL L AFNSGD+ R+Q L +A QP L NE +LL KI +LCLME+ F+RP+ R + IA+ K+++ VE L+MK+LSV L+ G ID+V+ VH++WVQ RVL+ Sbjct: 62 NFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSS-----DEAVILCKTAIGALKLNIGDLQATKETIEDVEEMLNNLPGVT-SVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCVDIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRNTDRQWLIDTLYAFNSGDVDRFQTL----KSAWGQQPDLAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEIAKSAKITVNKVELLVMKALSVGLVRGSIDEVDKRVHMTWVQPRVLD 342 HSP 2 Score: 25.0238 bits (53), Expect = 4.604e-48 Identity = 10/32 (31.25%), Postives = 18/32 (56.25%), Query Frame = 1 Query: 874 IPQIKSLRDRLDRWLGKVHTALLSIRAETPDL 969 + QIK ++DRL+ W V + L + + D+ Sbjct: 343 LQQIKGMKDRLELWCTDVKSMELLVEHQAQDI 374
BLAST of DY256872 vs. ExPASy Swiss-Prot
Match: PSD13_BOVIN (26S proteasome non-ATPase regulatory subunit 13 OS=Bos taurus GN=PSMD13 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 7.821e-48 Identity = 107/291 (36.77%), Postives = 167/291 (57.39%), Query Frame = 2 Query: 2 NFITDFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQQRVLE 874 NFI++FE ++N L L + V RQ + A+S+LE EK++++ +E ++ K I KL GD + K+ +ED + L ++ + SV++ +Y +SS+Y++ A +YK AL +L ++ GD ++NFGELL HP++ SL T +WL L AFNSG++ R+Q L A QP L NE +LL KI +LCLME+ F+RP+ R + IA K+++ +VE L+MK+LSV L++G ID+V+ VH++WVQ RVL+ Sbjct: 62 NFISEFEHRVNPLSLVEIILHVVRQMTDPNVALSFLEKTREKVKSS-----DEAVILCKTAIGALKLNIGDLQVTKETIEDVEEMLSNLPGVT-SVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCVDIKDLPVSEQQERAFTLGLAGLLGDGVFNFGELLMHPVLESLRDTDRQWLIDTLYAFNSGNVERFQTL----KTAWGQQPDLAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEIARSAKITVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLD 342 HSP 2 Score: 23.483 bits (49), Expect = 7.821e-48 Identity = 9/32 (28.12%), Postives = 18/32 (56.25%), Query Frame = 1 Query: 874 IPQIKSLRDRLDRWLGKVHTALLSIRAETPDL 969 + QIK ++DRL+ W V + + + + D+ Sbjct: 343 LQQIKGMKDRLEFWCTDVKSMEMLVEHQAHDI 374
BLAST of DY256872 vs. ExPASy Swiss-Prot
Match: PSD13_HUMAN (26S proteasome non-ATPase regulatory subunit 13 OS=Homo sapiens GN=PSMD13 PE=1 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 2.257e-47 Identity = 105/291 (36.08%), Postives = 169/291 (58.08%), Query Frame = 2 Query: 2 NFITDFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQQRVLE 874 NFI++FE ++N L L + V RQ + A+++LE EK++++ +E ++ K I KL GD + K+ +ED + L+++ + SV++ +Y +SS+Y++ A +YK AL +L ++ G+ ++NFGELL HP++ SL T +WL L AFNSG++ R+Q L A QP L NE +LL KI +LCLME+ F+RP+ R + IA+ K+++ +VE L+MK+LSV L++G ID+V+ VH++WVQ RVL+ Sbjct: 62 NFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSS-----DEAVILCKTAIGALKLNIGDLQVTKETIEDVEEMLNNLPGVT-SVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCVDIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRNTDRQWLIDTLYAFNSGNVERFQTL----KTAWGQQPDLAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEIAKSAKITVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLD 342 HSP 2 Score: 23.483 bits (49), Expect = 2.257e-47 Identity = 9/32 (28.12%), Postives = 18/32 (56.25%), Query Frame = 1 Query: 874 IPQIKSLRDRLDRWLGKVHTALLSIRAETPDL 969 + QIK ++DRL+ W V + + + + D+ Sbjct: 343 LQQIKGMKDRLEFWCTDVKSMEMLVEHQAHDI 374
BLAST of DY256872 vs. ExPASy Swiss-Prot
Match: PSD13_MOUSE (26S proteasome non-ATPase regulatory subunit 13 OS=Mus musculus GN=Psmd13 PE=1 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 1.106e-46 Identity = 105/291 (36.08%), Postives = 166/291 (57.04%), Query Frame = 2 Query: 2 NFITDFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQQRVLE 874 NFI++FE ++N L L + V RQ + A+++LE EK++++ +E ++ K I KL GD + K+ +ED + L+++ + SV++ +Y +SS+Y++ A +YK AL +L ++ G+ ++NFGELL HP++ SL T +WL L AFNSG + R+Q L A QP L NE +LL KI +LCLME+ F+RP+ R + IA+ K+++ VE L+MK+LSV L+ G ID+V+ VH++WVQ RVL+ Sbjct: 62 NFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSS-----DEAVILCKTAIGALKLNIGDLQATKETIEDVEEMLNNLPGVT-SVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCVDIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRDTDRQWLIDTLYAFNSGAVDRFQTL----KCAWGQQPDLAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEIAKSAKITVNKVELLVMKALSVGLVRGSIDEVDKRVHMTWVQPRVLD 342 HSP 2 Score: 24.2534 bits (51), Expect = 1.106e-46 Identity = 9/32 (28.12%), Postives = 18/32 (56.25%), Query Frame = 1 Query: 874 IPQIKSLRDRLDRWLGKVHTALLSIRAETPDL 969 + QIK ++DRL+ W V + + + + D+ Sbjct: 343 LQQIKGMKDRLELWCTDVKSMEMLVEHQAQDI 374
BLAST of DY256872 vs. ExPASy Swiss-Prot
Match: PSD13_CHICK (26S proteasome non-ATPase regulatory subunit 13 OS=Gallus gallus GN=PSMD13 PE=1 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 1.441e-46 Identity = 105/291 (36.08%), Postives = 169/291 (58.08%), Query Frame = 2 Query: 2 NFITDFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQQRVLE 874 NFI++FE ++N L L + V RQ + A+++LE EK++++ +E ++ K I KL GD + K+ +E+ + L+++ + SV++ +Y +SS+Y++ A +YK AL +L V+ G+ +YNFGELL HP++ SL T +WL L AFNSG++ +Q L +A QP L NE LL+KI +LCLME+ F+RP+ R + IA+ K+++ +VE L+MK+LSV L++G ID+V+ VH++WVQ RVL+ Sbjct: 62 NFISEFEHRVNPLSLVEIILHVVRQMTDPTVALTFLEKTREKVKSS-----DEAVILCKTAIGALKLNIGDLQVTKETIEEVEEMLNNLPGVT-SVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCIDVKDLPVSEQQERAFTLGLAGLLGEGVYNFGELLMHPVLESLRSTDRQWLIDTLYAFNSGNVETFQAL----KSAWGQQPDLAANEALLLQKIQLLCLMEMTFTRPANHRQLTFEEIAKSAKVTVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLD 342 HSP 2 Score: 23.8682 bits (50), Expect = 1.441e-46 Identity = 9/32 (28.12%), Postives = 18/32 (56.25%), Query Frame = 1 Query: 874 IPQIKSLRDRLDRWLGKVHTALLSIRAETPDL 969 + QIK ++DRL+ W V + + + + D+ Sbjct: 343 LQQIKGMKDRLEFWCTDVRSMEMLVEHQAHDI 374
BLAST of DY256872 vs. ExPASy Swiss-Prot
Match: RPN9_SCHPO (Probable 26S proteasome regulatory subunit rpn9 OS=Schizosaccharomyces pombe GN=rpn9 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 1.461e-35 Identity = 90/290 (31.03%), Postives = 151/290 (52.07%), Query Frame = 2 Query: 2 NFITDFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQQRVL 871 NF+ F IN LK + + +A + L ++ +L +E++ ++ +Y + IA KL G E ++LL +D + ++ ++++YY VS+ Y+K ++A++Y+ LLYL+ ++ GD IYNFGELL HP+ L GT+ EWL+ ++ A N GDL ++ L + P L + L +KI ++ L+E++F P RT+ IA T++ +VE L+M++LSV LI G+ID+V V +S VQ R+L Sbjct: 66 NFVNSFRPNINQLKAVYMGLKAFESCSNDEA-LRNLNQIVNEL---DEEKYKDAYVYSIVAIARIKLISGKLDEARELLVKASKIIDHIDYVESLIHSSYYSVSADYYKAKADYAQYYRHCLLYLSCIDLDKCSHTELVERAVDLSVAAILGD-IYNFGELLLHPVFELLVGTQHEWLHDLVIAMNVGDLPLFERLM----GQINKMPLLQSSVALLGQKIRLMALIELVFQLPPNQRTLTFDTIARATRIPSNEVELLIMRALSVGLITGVIDEVTQIVTISSVQSRIL 346
BLAST of DY256872 vs. ExPASy Swiss-Prot
Match: RPN9_YEAST (26S proteasome regulatory subunit RPN9 OS=Saccharomyces cerevisiae GN=RPN9 PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 7.505e-32 Identity = 88/300 (29.33%), Postives = 154/300 (51.33%), Query Frame = 2 Query: 2 NFITDFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKE--------EPILYIKMQIAMFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSVE-XXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTG-TKVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQQRVL 871 NF++ F KIN L + + + + + ++ YL+ + + + + +++ + IL I +IA L + D + + LL+D + TLD I + ++Y +SQY KF +F FY +LLYL+ GD IYNFGELL HPI+ ++ + +WL+ +L A GD ++ L +V + + P L ++E L +KI ++ L+E +F + R + I++ T L ++VEHL+M+++S+ L++G IDQV V +SWVQ R++ Sbjct: 64 NFVSKFYDKINQLSVVKYLLASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLSTLEPSTSITLAERQQLAYDLSISALLGDKIYNFGELLHHPIMETIVNDSNYDWLFQLLNALTVGDFDKFDSLIKVQISKI---PILAQHESFLRQKICLMTLIETVFVK--NIRMLSFEDISKATHLPKDNVEHLVMRAISLGLLKGSIDQVNELVTISWVQPRII 358 The following BLAST results are available for this feature:
BLAST of DY256872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY256872 ID=DY256872; Name=DY256872; organism=Citrus clementina; type=EST; length=1295bpback to top |