DY257045
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257045 vs. ExPASy Swiss-Prot
Match: PGLR_VITVI (Probable polygalacturonase OS=Vitis vinifera GN=GSVIVT00026920001 PE=1 SV=1) HSP 1 Score: 525.783 bits (1353), Expect = 2.189e-148 Identity = 248/309 (80.26%), Postives = 278/309 (89.97%), Query Frame = 1 Query: 55 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEPWWRKFRVGELKYTRPYLIEIMHSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDKYYDPHALPEIQNINYRDMVAKNVXMAARLKXLAGGSFTGICLSNVTIDLTNKPKK 981 +DAVLLASQD +WPVI+PLPSYGRGRD GRY+SLIFGTNLTDV+ITGDNGTIDGQG WW++F G+LKYTRPYLIE+M+S +IQISNLTL+NSPSWNVHPVYS ++++QGITILAPV SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWD+YGIAYGMPTKQL+IRRLTCISP+SAVIALGSEMSGGIQDVRAEDI AI+SESG+RIKT +GRGG+VKDIYVR MTMKTMKWAFW+TG+YGSH D +YDP A P IQ INYRDMVA+NV MAARL+ + FTGIC+SNVTI L K KK Sbjct: 124 RDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTIDGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTMKTMKWAFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGICISNVTIHLAAKAKK 432
BLAST of DY257045 vs. ExPASy Swiss-Prot
Match: PGLR2_CHAOB (Polygalacturonase OS=Chamaecyparis obtusa PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 4.141e-22 Identity = 84/276 (30.43%), Postives = 130/276 (47.10%), Query Frame = 1 Query: 181 LTDVVITGDNGTIDGQGEPWWRKFRVGELKYT----------RPYLIEIMHSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI-ALGSEMS-GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDKYYDPHALPEIQNINYRDMVAKNVXMAA-RLKXLAGGSFTGICLSNVTIDLTN 969 LTD + G G IDGQG+ WW G+ K RP I+I +S+++ + LTL+NSP +++ V +QG+ I AP SPNTDGI+ + IE C I +GDDC+A+ +G + + I+ L C I +LG + S + V ID+++G+RIKT G G I + M + I Y + + + +IQ + Y+++ + AA +L TGI LSNV++ LT+ Sbjct: 145 LTDFNLMG-TGVIDGQGQQWW----AGQCKVVNGRTVCNDRNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGECEGVKIQGLKIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAIGTG-----------SSNITIKDLICGPGHGISIGSLGRDNSRAEVSHVHVNRAKFIDTQNGLRIKTWQGGSGLASYITYENVEMINSENPILINQFYCTSASACQNQRSAVQIQGVTYKNIHGTSATAAAIQLMCSDSVPCTGIQLSNVSLKLTS 404
BLAST of DY257045 vs. ExPASy Swiss-Prot
Match: PGLR_RHIRD (Polygalacturonase OS=Rhizobium radiobacter GN=pgl PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.205e-21 Identity = 68/215 (31.63%), Postives = 101/215 (46.98%), Query Frame = 1 Query: 289 IEIMHSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG-WDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKT-AVGRGGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDKYYD----------PHALPEIQNINYRDMVAKNVXMAA 897 + ++ Q+ T+ N+ SW +HP + TI+AP SPNTDG NP+SC N I GDDC+AVK+G G + + I R + P + +GSEMSGG+ DV ED I ++ G+R+KT A GG V +I +RR+ + ++ A Y D + D P + I D+ +N+ AA Sbjct: 25 LHLVSCHKTQLLGFTIRNAASWTIHPQGCEDLTAAASTIIAPHDSPNTDGFNPESCRNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGITVRHCLMQPGHGGLVIGSEMSGGVHDVTVEDCDMIGTDRGLRLKTGARSGGGMVGNITMRRVLLDGVQTALSANAHYHCDADGHDDWVQSRNPAPVNDGTPFVDGITVEDVEIRNLAHAA 239
BLAST of DY257045 vs. ExPASy Swiss-Prot
Match: PGLR3_ARATH (Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana GN=At3g15720 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 2.512e-19 Identity = 64/206 (31.07%), Postives = 106/206 (51.46%), Query Frame = 1 Query: 166 IFGTNLTDVVITGDNGTIDGQGEPWWRKFRVGELKYTRPYLIEIMHSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGG----IQDVRAEDITAIDSESGVRIKTAVGRGGFVKDIYVRRMTMKTMK 771 I T++ +VI GD G I+GQG WW E K +RP ++ N+++S LT ++SP ++H + V + + I AP +SPNTDGI+ + +N I+DC I +GDDC+A+ SG T + I + C I++GS G +++V ++ + +G RIKT G G+ + I +T+ ++ Sbjct: 107 ILFTDIEGLVIEGD-GEINGQGSSWW------EHKGSRPTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSG-----------TSNIHISGIDCGPGHG--ISIGSLGKDGETATVENVCVQNCNFRGTMNGARIKTWQGGSGYARMITFNGITLDNVE 292
BLAST of DY257045 vs. ExPASy Swiss-Prot
Match: PGLR2_JUNAS (Polygalacturonase OS=Juniperus ashei GN=JNA2 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 4.285e-19 Identity = 84/272 (30.88%), Postives = 125/272 (45.96%), Query Frame = 1 Query: 181 LTDVVITGDNGTIDGQGEPWWR------KFRVGELKYTRPYLIEIMHSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI-ALGSEMS-GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDKYYDPHALPEIQNINYRDMVAKNVXMAA-RLKXLAGGSFTGICLSNVTIDLTN 969 LTD + G G IDGQG WW R RP I+I S+++ + LTL NSP +++ V +QGI I AP SPNTDGI+ + IE C I +GDDCVAV +G + + I+ LTC I +LG S + V + ID+++G+RIKT G G I + M + I Y + + + +IQ++ ++++ + AA +L + I LSNV + LT+ Sbjct: 146 LTDFNLMG-TGVIDGQGNRWWSDQCKTINGRTVCNDKGRPTAIKIDFSKSVTVKELTLTNSPEFHLVFGECDGVKIQGIKIKAPRDSPNTDGIDIFASKRFEIEKCTIGTGDDCVAVGTG-----------SSNITIKDLTCGPGHGMSIGSLGKGNSRSEVSFVHLDGAKFIDTQNGLRIKTWQGGSGLASHITYENVEMINAENPILINQFYCTSAAACKNQRSAVKIQDVTFKNIHGTSATTAAIQLMCSDSVPCSNIKLSNVFLKLTS 405
BLAST of DY257045 vs. ExPASy Swiss-Prot
Match: PGLR2_CRYJA (Polygalacturonase OS=Cryptomeria japonica PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.379e-17 Identity = 79/276 (28.62%), Postives = 125/276 (45.29%), Query Frame = 1 Query: 181 LTDVVITGDNGTIDGQGEPWWRKFRVGELKYT----------RPYLIEIMHSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI-ALGSEMS-GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDKYYDPHALPEIQNINYRDMVAKNVXMAA-RLKXLAGGSFTGICLSNVTIDLTN 969 LT + G G IDGQG+ WW G+ K+ RP I+ S + I L L+NSP +++ V + GI+I AP SPNTDGI+ + N ++ I +GDDCVA+ +G + ++I L C I +LG E S + V ID+++G+RIKT G G I + M + I Y + + + +IQ++ Y+++ + AA +LK I LS++++ LT+ Sbjct: 145 LTGFTLMG-KGVIDGQGKQWW----AGQCKWVNGREICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDSPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTG-----------SSNIVIEDLICGPGHGISIGSLGRENSRAEVSYVHVNGAKFIDTQNGLRIKTWQGGSGMASHIIYENVEMINSENPILINQFYCTSASACQNQRSAVQIQDVTYKNIRGTSATAAAIQLKCSDSMPCKDIKLSDISLKLTS 404
BLAST of DY257045 vs. ExPASy Swiss-Prot
Match: ADPG1_ARATH (Polygalacturonase ADPG1 OS=Arabidopsis thaliana GN=ADPG1 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.800e-17 Identity = 71/258 (27.52%), Postives = 119/258 (46.12%), Query Frame = 1 Query: 202 GDNGTIDGQGEPWWR---KFRVGELKYTRPYLIEIMHSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI-ALGSEMSGG-IQDVRAEDITAIDSESGVRIKTAVGRGGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDKYYDPHALPEIQNINYRDMVAKN-VXMAARLKXLAGGSFTGICLSNVTI 957 G G I+G G+ WW+ K + P + + + +N+ + NL + N+ + + V V + I AP SPNTDGI+ + N R+ + I +GDDC++++ G T+ L I LTC I +LG + S + + + +S++GVRIKT G G K+I + + M+ +K I Y DK D + +++N+ Y+++ + +A L GI L NV I Sbjct: 163 GSTGIINGNGKTWWQNSCKIDKSKPCTKAPTALTLYNLKNLNVKNLRVKNAQQIQISIEKCNKVEVSNVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDG-----------TQNLQIFDLTCGPGHGISIGSLGDDNSKAYVSGINVDGAKFSESDNGVRIKTYQGGSGTAKNIKFQNIRMENVKNPIIIDQDY-CDKDKCEDQESAVQVKNVVYKNISGTSATDVAITLNCSEKYPCQGIVLENVKI 408
BLAST of DY257045 vs. ExPASy Swiss-Prot
Match: ADPG2_ARATH (Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN=ADPG2 PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 5.238e-17 Identity = 62/228 (27.19%), Postives = 107/228 (46.93%), Query Frame = 1 Query: 202 GDNGTIDGQGEPWWR---KFRVGELKYTRPYLIEIMHSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI-ALGSEMSGG-IQDVRAEDITAIDSESGVRIKTAVGRGGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDKYYDPHALPEIQNINYRDM 870 GD G +DG GE WW+ K + P + +S+++ + NL + N+ + S+V V + + AP SPNTDGI+ + N R+ + I +GDDC++++SG ++ + I +TC I +LG + S + V + +++GVRIKT G G +I + + M +K I Y K + +++N+ YRD+ Sbjct: 163 GDTGVVDGNGETWWQNSCKRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESG-----------SQNVQINDITCGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMDNVKNPIIIDQDY-CDKSKCTTEKSAVQVKNVVYRDI 378
BLAST of DY257045 vs. ExPASy Swiss-Prot
Match: PGLR6_ARATH (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana GN=At2g43860 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.167e-16 Identity = 77/281 (27.40%), Postives = 131/281 (46.62%), Query Frame = 1 Query: 166 IFGTNLTDVVITGDNGTIDGQGEPWWR-KFRVGELKYTRPYLIEIMHSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI-ALG-SEMSGGIQDVRAEDITAIDSESGVRIKT-AVGRGGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDKYYDPHALPEIQNINYRDM-VAKNVXMAARLKXLAGGSFTGICLSNVTIDLTNKPKKTSLE 993 I+ ++TDV I G G +D QG W+ K G T + S NI+IS LT INS +++ S++V + G+ + A SPNTDGI+ +S + I + I +GDDC+++ G + + I+ + C I +LG +E G+ +V ++ + + +GVRIKT F ++I + + MK +K I Y H + ++ N+ Y D+ N +A L TGI + +V + ++P + S + Sbjct: 116 IWFEDVTDVSIYG--GILDAQGTSLWKCKNNGGHNCPTGAKSLVFSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDGVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPG-----------STNVFIQTIRCGPGHGISIGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNSFARNIVFQHINMKMVKNPIIIDQHYCLHKPCPKQESGV-KVSNVRYEDIHGTSNTEVAVLLDCSKEKPCTGIVMDDVNLVSVHRPAQASCD 382
BLAST of DY257045 vs. ExPASy Swiss-Prot
Match: PGLR1_PECCC (Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum GN=peh PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 7.564e-16 Identity = 79/261 (30.27%), Postives = 121/261 (46.36%), Query Frame = 1 Query: 136 DTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE--------PWW---RKFRVGELKYTRPYLIEIMHSQNIQISNLTLINSPSWNVHPVYSSS--VIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDKYYDPHALPEIQNINYRDMVAK 879 DT G + I T+ T+ I G GTIDGQG WW +V +LK P LI+I S+N + N++LINSP N H V+S TI P T+ NTDGI+P S N I I +GDD VA+K AY ++ I L +++GSE + G+ +V +D+ + +G+RIK+ G V + + MK + I Y + + +P+ +I ++D+ ++ Sbjct: 119 DTNGKGCDAFITATSTTNSGIYGP-GTIDGQGGVKLQDKKVSWWDLAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSP--NFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAHSNISTGDDNVAIK--------AYKGRSETRNISILHNEFGTGHGMSIGSE-TMGVYNVTVDDLIMTGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIVIDTVY-----EKKEGSNVPDWSDITFKDITSQ 362 The following BLAST results are available for this feature:
BLAST of DY257045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257045 ID=DY257045; Name=DY257045; organism=Citrus clementina; type=EST; length=1296bpback to top |