DY257976
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY257976 vs. ExPASy Swiss-Prot
Match: PSDE_ARATH (26S proteasome non-ATPase regulatory subunit 14 OS=Arabidopsis thaliana GN=RPN11 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 5.204e-39 Identity = 81/104 (77.88%), Postives = 83/104 (79.81%), Query Frame = 2 Query: 5 NYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIF 316 NYR WTDGLTL RFD HSKTNEQTVQEML+LA KYNKAVQEEDEL PEKLAI NVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTV+F Sbjct: 205 NYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKTNEQTVQEMLSLAAKYNKAVQEEDELSPEKLAIVNVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVVF 308
BLAST of DY257976 vs. ExPASy Swiss-Prot
Match: PSDE_MOUSE (26S proteasome non-ATPase regulatory subunit 14 OS=Mus musculus GN=Psmd14 PE=1 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 5.586e-25 Identity = 57/104 (54.81%), Postives = 68/104 (65.38%), Query Frame = 2 Query: 5 NYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIF 316 NYR W +GLTL + H K NE V+EML LA YNKAV+EED++ PE+LAI NVG+QD K+HLEEHV LM+SNIVQ L MLDTV+F Sbjct: 206 NYRKNELEQKMLLNLHKKSWMEGLTLQDYSEHCKHNESVVKEMLELAKNYNKAVEEEDKMTPEQLAIKNVGKQDPKRHLEEHVDVLMTSNIVQCLAAMLDTVVF 309
BLAST of DY257976 vs. ExPASy Swiss-Prot
Match: PSDE_HUMAN (26S proteasome non-ATPase regulatory subunit 14 OS=Homo sapiens GN=PSMD14 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.586e-25 Identity = 57/104 (54.81%), Postives = 68/104 (65.38%), Query Frame = 2 Query: 5 NYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIF 316 NYR W +GLTL + H K NE V+EML LA YNKAV+EED++ PE+LAI NVG+QD K+HLEEHV LM+SNIVQ L MLDTV+F Sbjct: 206 NYRKNELEQKMLLNLHKKSWMEGLTLQDYSEHCKHNESVVKEMLELAKNYNKAVEEEDKMTPEQLAIKNVGKQDPKRHLEEHVDVLMTSNIVQCLAAMLDTVVF 309
BLAST of DY257976 vs. ExPASy Swiss-Prot
Match: PSDE_DROME (26S proteasome non-ATPase regulatory subunit 14 OS=Drosophila melanogaster GN=Rpn11 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 5.228e-23 Identity = 51/104 (49.04%), Postives = 68/104 (65.38%), Query Frame = 2 Query: 5 NYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIF 316 NYR W DGLTL ++ H NE TV EML+LA YNK++++E+++ PE+LAI NVG+QD K+HLEE V +M +NIVQ LG MLDT++F Sbjct: 204 NYRKNELEQKMLLNLHKKSWKDGLTLSDYNEHCSINEDTVAEMLDLAKNYNKSLEDEEKMTPEQLAIKNVGKQDPKRHLEEKVDKVMQNNIVQCLGAMLDTIVF 307
BLAST of DY257976 vs. ExPASy Swiss-Prot
Match: PSDE_DICDI (26S proteasome non-ATPase regulatory subunit 14 OS=Dictyostelium discoideum GN=psmD14 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.924e-17 Identity = 40/104 (38.46%), Postives = 62/104 (59.62%), Query Frame = 2 Query: 5 NYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIF 316 NYR WT+GL + +FD H ++NE+ + +L L +Y K++Q+ED++ PEK ++ VG+ D K+HL V LM++N+V+ L MLDTV F Sbjct: 203 NYRKNELEQKMLLNLHKKKWTEGLIVDKFDTHEQSNEKQINNLLELTKQYQKSIQDEDKIEPEKKEVSAVGKLDPKRHLISDVHTLMANNVVRVLTVMLDTVTF 306
BLAST of DY257976 vs. ExPASy Swiss-Prot
Match: RPN11_SCHPO (26S proteasome regulatory subunit rpn11 OS=Schizosaccharomyces pombe GN=rpn11 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 7.083e-12 Identity = 34/85 (40.00%), Postives = 50/85 (58.82%), Query Frame = 2 Query: 62 WTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIF 316 W GL L F+ ++ N ++ +M +L+ +Y + VQ E L PE+L I VG+QD KKHL+ V + +NI L MLD+V F Sbjct: 224 WAHGLLLENFNSAAEKNHASIDKMKSLSEQYTERVQNEVTLSPEQLRIQYVGKQDPKKHLDAEVQKCIDNNISSMLACMLDSVAF 308
BLAST of DY257976 vs. ExPASy Swiss-Prot
Match: PSDE_CAEEL (26S proteasome non-ATPase regulatory subunit 14 OS=Caenorhabditis elegans GN=rpn-11 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.061e-11 Identity = 29/82 (35.37%), Postives = 53/82 (64.63%), Query Frame = 2 Query: 62 WTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDT 307 W D +++ + + N++ ++ ML LA Y KA+++E + ++LAI NVG+ D K+H+ + VS +++ NIVQ+L M+ T Sbjct: 227 WMDAVSVENYSKCGEQNKEHLKAMLKLAKNYKKALEDEKNMTDQELAIKNVGKMDPKRHIADEVSKMLNDNIVQSLAGMMAT 308 The following BLAST results are available for this feature:
BLAST of DY257976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257976 ID=DY257976; Name=DY257976; organism=Citrus clementina; type=EST; length=429bpback to top |