DY258096
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258096 vs. ExPASy Swiss-Prot
Match: HMCS_ARATH (Hydroxymethylglutaryl-CoA synthase OS=Arabidopsis thaliana GN=HMGS PE=2 SV=2) HSP 1 Score: 443.351 bits (1139), Expect = 1.434e-123 Identity = 214/260 (82.31%), Postives = 236/260 (90.77%), Query Frame = 1 Query: 223 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCNKYQE-TGRETNFSFQRLINFWSIPPYNRLGQKNF 999 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQ+C+AFC+E+EDVISMS AVT+L EKYKIDP QIGRLEVGSETVIDKSKSIKTFLMQ+FEK GNTD+EGVDSTNACYGGTAAL NCVNWVES+SWDGRYGLV+CTDSAVYAEGPARPTGGAAA+ ML+GPDAP+ FESKLR SHM+H YDFYKPNLASEYPVVDGKLSQTCYLMALD+CYK LCNK+++ G+E + + I F S PYN+L QK+F Sbjct: 1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCLAFCTELEDVISMSFNAVTSLFEKYKIDPNQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAVYAEGPARPTGGAAAIAMLIGPDAPIVFESKLRASHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKIEGKEFSINDADYIVFHS--PYNKLVQKSF 258
BLAST of DY258096 vs. ExPASy Swiss-Prot
Match: HMCS1_PONAB (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Pongo abelii GN=HMGCS1 PE=2 SV=1) HSP 1 Score: 316.62 bits (810), Expect = 2.024e-85 Identity = 154/260 (59.23%), Postives = 192/260 (73.85%), Query Frame = 1 Query: 229 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCNK----YQETGRETNFSFQRLINFWSIPPYNRLGQKN 996 K+VGI+A++IYFP V Q LE +DG + GKYTIGLGQ M FC++ ED+ S+ +T V NL+E+ + IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTDIEG+D+TNACYGGTAA+FN VNW+ESSSWDGRY LVV D AVYA G ARPTGG AV +L+GP+AP+ FE LRG+HM HAYDFYKP++ SEYP+VDGKLS CYL ALD CY C K +Q+ G + +F+ PY +L QK+ Sbjct: 15 KDVGIVALEIYFPSQYVDQAELEKYDGVAAGKYTIGLGQAKMGFCTDREDINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIAVYATGNARPTGGVGAVALLIGPNAPLIFERGLRGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIRAQWQKEGNDKDFTLNDFGFMIFHSPYCKLVQKS 274
BLAST of DY258096 vs. ExPASy Swiss-Prot
Match: HMCS1_HUMAN (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Homo sapiens GN=HMGCS1 PE=1 SV=2) HSP 1 Score: 316.235 bits (809), Expect = 2.643e-85 Identity = 154/260 (59.23%), Postives = 191/260 (73.46%), Query Frame = 1 Query: 229 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCNK----YQETGRETNFSFQRLINFWSIPPYNRLGQKN 996 K+VGI+A++IYFP V Q LE +DG GKYTIGLGQ M FC++ ED+ S+ +T V NL+E+ + IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTDIEG+D+TNACYGGTAA+FN VNW+ESSSWDGRY LVV D AVYA G ARPTGG AV +L+GP+AP+ FE LRG+HM HAYDFYKP++ SEYP+VDGKLS CYL ALD CY C K +Q+ G + +F+ PY +L QK+ Sbjct: 15 KDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIAVYATGNARPTGGVGAVALLIGPNAPLIFERGLRGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKEGNDKDFTLNDFGFMIFHSPYCKLVQKS 274
BLAST of DY258096 vs. ExPASy Swiss-Prot
Match: HMCS1_CHICK (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Gallus gallus GN=HMGCS1 PE=1 SV=1) HSP 1 Score: 315.079 bits (806), Expect = 5.889e-85 Identity = 157/260 (60.38%), Postives = 189/260 (72.69%), Query Frame = 1 Query: 229 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCNK----YQETGRETNFSFQRLINFWSIPPYNRLGQKN 996 K+VGI+A++IYFP V Q LE +DG GKYTIGLGQ M FCS+ ED+ S+ LT V L+E+ + IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTD+EG+D+TNACYGGTAALFN +NW+ESSSWDGRY LVV D AVYA G ARPTGGA AV MLVG +AP+ FE LRG+HM HAYDFYKP++ SEYPVVDGKLS CYL ALD CY NK +Q+ G + F+ PY +L QK+ Sbjct: 15 KDVGIVALEIYFPSQYVDQTELEKYDGVDAGKYTIGLGQSKMGFCSDREDINSLCLTVVQKLMERNSLSYDCIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDIAVYATGNARPTGGAGAVAMLVGSNAPLIFERGLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDRCYSVYRNKIHAQWQKEGTDRGFTLNDFGFMIFHSPYCKLVQKS 274
BLAST of DY258096 vs. ExPASy Swiss-Prot
Match: HMCS1_CRIGR (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Cricetulus griseus GN=HMGCS1 PE=3 SV=1) HSP 1 Score: 311.997 bits (798), Expect = 4.985e-84 Identity = 152/260 (58.46%), Postives = 193/260 (74.23%), Query Frame = 1 Query: 229 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCY----KCLCNKYQETGRETNFSFQRLINFWSIPPYNRLGQKN 996 K+VGI+A++IYFP V Q LE +DG GKYTIGLGQ M FC++ ED+ S+ LT V NL+E+ + IGRLEVG+ET+IDKSKS+K+ LMQ+FE+ GNTDIEG+D+TNACYGGTAA+FN VNW+ESSSWDGRY LVV D A+YA G ARPTGG AV +L+GP+AP+ F+ LRG+HM HAYDFYKP++ SEYP+VDGKLS CYL ALD CY K + ++Q+ G + +F+ S PY +L QK+ Sbjct: 15 KDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQARMGFCTDREDINSLCLTVVQNLMERNSLSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIAIYATGNARPTGGVGAVALLIGPNAPLIFDRGLRGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYRKKIRAQWQKEGNDNDFTLNDFGFMISHSPYCKLVQKS 274
BLAST of DY258096 vs. ExPASy Swiss-Prot
Match: HMCS1_MOUSE (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Mus musculus GN=Hmgcs1 PE=1 SV=1) HSP 1 Score: 310.071 bits (793), Expect = 1.894e-83 Identity = 152/260 (58.46%), Postives = 193/260 (74.23%), Query Frame = 1 Query: 229 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCY----KCLCNKYQETGRETNFSFQRLINFWSIPPYNRLGQKN 996 K+VGI+A++IYFP V Q LE +DG GKYTIGLGQ M FC++ ED+ S+ LT V L+E++ + IGRLEVG+ET+IDKSKS+K+ LMQ+FE+ GNTDIEG+D+TNACYGGTAA+FN VNWVESSSWDGRY LVV D A+YA G ARPTGG AV +L+GP+AP+ F+ LRG+HM HAYDFYKP++ SEYPVVDGKLS CYL ALD CY K + ++Q+ G++ +F+ PY +L QK+ Sbjct: 15 KDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQARMGFCTDREDINSLCLTVVQKLMERHSLSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAVNWVESSSWDGRYALVVAGDIAIYATGNARPTGGVGAVALLIGPNAPLIFDRGLRGTHMQHAYDFYKPDMLSEYPVVDGKLSIQCYLSALDRCYSVYRKKIRAQWQKEGKDKDFTLNDFGFMIFHSPYCKLVQKS 274
BLAST of DY258096 vs. ExPASy Swiss-Prot
Match: HMCSA_DICDI (Hydroxymethylglutaryl-CoA synthase A OS=Dictyostelium discoideum GN=hgsA PE=1 SV=2) HSP 1 Score: 309.686 bits (792), Expect = 2.474e-83 Identity = 148/261 (56.70%), Postives = 190/261 (72.80%), Query Frame = 1 Query: 220 TMAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCNKYQETGRETNFSFQRLINFWSIPPYNRLGQKNFG 1002 T +N+GI +++YFP T V QE LE DG S+GKYT+GLGQ MAFC + ED+ S+SL AV NL++K+ +DP IGRLEVG+ETVIDKSKS+KT LM +F K GNT I+G+D+ NACYGGT+AL N + W+ESS WDGR +VV D AVY +GPARPTGGA V ML+GP+AP+ FES LRG HM + YDFYKP++ SEYP VDGKLS +CY A+D CY +++ + +FS ++ PYN+L QK+FG Sbjct: 2 TKPENIGIHGIEVYFPSTYVAQEDLEKFDGVSQGKYTLGLGQTNMAFCGDREDIYSLSLNAVNNLMDKFNVDPNSIGRLEVGTETVIDKSKSVKTVLMDLFAKHGNTSIDGIDTINACYGGTSALHNALQWMESSYWDGRNAIVVAGDIAVYEKGPARPTGGAGVVAMLIGPNAPITFESGLRGVHMENVYDFYKPDMDSEYPRVDGKLSISCYFRAIDNCYNRYAKAFEKKYGK-SFSLDQVDFALFHSPYNKLVQKSFG 261
BLAST of DY258096 vs. ExPASy Swiss-Prot
Match: HMCS1_RAT (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Rattus norvegicus GN=Hmgcs1 PE=1 SV=1) HSP 1 Score: 309.686 bits (792), Expect = 2.474e-83 Identity = 152/260 (58.46%), Postives = 192/260 (73.85%), Query Frame = 1 Query: 229 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCY----KCLCNKYQETGRETNFSFQRLINFWSIPPYNRLGQKN 996 K+VGI+A++IYFP V Q LE +DG GKYTIGLGQ M FC++ ED+ S+ LT V L+E+ + IGRLEVG+ET+IDKSKS+K+ LMQ+FE+ GNTDIEG+D+TNACYGGTAA+FN VNW+ESSSWDGRY LVV D A+YA G ARPTGG AV +L+GP+APV F+ LRG+HM HAYDFYKP++ SEYPVVDGKLS CYL ALD CY K + ++Q+ G++ +F+ PY +L QK+ Sbjct: 15 KDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQARMGFCTDREDINSLCLTVVQKLMERNSLSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIAIYASGNARPTGGVGAVALLIGPNAPVIFDRGLRGTHMQHAYDFYKPDMLSEYPVVDGKLSIQCYLSALDRCYSVYRKKIRAQWQKEGKDKDFTLNDFGFMIFHSPYCKLVQKS 274
BLAST of DY258096 vs. ExPASy Swiss-Prot
Match: HMCS2_HUMAN (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Homo sapiens GN=HMGCS2 PE=1 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 7.427e-83 Identity = 152/279 (54.48%), Postives = 196/279 (70.25%), Query Frame = 1 Query: 172 HIFFIWAFSVFENQIKTMAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCY----KCLCNKYQETGRETNFSFQRLINFWSIPPYNRLGQKN 996 H F A +V + T K+VGILA+++YFP V Q LE ++ GKYT+GLGQ M FCS ED+ S+ LT V L+E+ ++ +GRLEVG+ET+IDKSK++KT LM++F+ GNTDIEG+D+TNACYGGTA+LFN NW+ESSSWDGRY +VVC D AVY G ARPTGGA AV ML+GP AP+A E LRG+HM + YDFYKPNLASEYP+VDGKLS CYL ALD CY K + N++++ G + F+ L P+ ++ QK+ Sbjct: 33 HQRFSTASAVPLAKTDTWPKDVGILALEVYFPAQYVDQTDLEKYNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIAVYPSGNARPTGGAGAVAMLIGPKAPLALERGLRGTHMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSYRKKIQNQWKQAGSDRPFTLDDLQYMIFHTPFCKMVQKS 311 HSP 2 Score: 21.1718 bits (43), Expect = 7.427e-83 Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 2 Query: 989 KKTLARLVFKDF 1024 +K+LARL+F DF Sbjct: 309 QKSLARLMFNDF 320
BLAST of DY258096 vs. ExPASy Swiss-Prot
Match: HMCS2_MOUSE (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Mus musculus GN=Hmgcs2 PE=1 SV=2) HSP 1 Score: 301.982 bits (772), Expect = 1.381e-81 Identity = 148/263 (56.27%), Postives = 187/263 (71.10%), Query Frame = 1 Query: 220 TMAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCY----KCLCNKYQETGRETNFSFQRLINFWSIPPYNRLGQKN 996 T K+VGILA+++YFP V Q LE + GKYT+GLGQ M FCS ED+ S+ LT V L+E+ K+ +GRLEVG+ET+IDKSK++KT LM++F+ GNTDIEG+D+TNACYGGTA+LFN NW+ESS WDGRY LVVC D AVY G ARPTGGA AV ML+GP AP+ E LRG+HM +AYDFYKPNLASEYP+VDGKLS CYL ALD CY K + N++++ G F+ + P+ ++ QK+ Sbjct: 49 TWPKDVGILALEVYFPAQYVDQTDLEKFNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRLMERTKLPWDAVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSYWDGRYALVVCGDIAVYPSGNARPTGGAGAVAMLIGPKAPLVLEQGLRGTHMENAYDFYKPNLASEYPLVDGKLSIQCYLRALDRCYAAYRKKIQNQWKQAGNNQPFTLDDVQYMIFHTPFCKMVQKS 311 HSP 2 Score: 21.1718 bits (43), Expect = 1.381e-81 Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 2 Query: 989 KKTLARLVFKDF 1024 +K+LARL+F DF Sbjct: 309 QKSLARLMFNDF 320 The following BLAST results are available for this feature:
BLAST of DY258096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258096 ID=DY258096; Name=DY258096; organism=Citrus clementina; type=EST; length=1301bpback to top |