DY258175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: RUBB_ARATH (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Arabidopsis thaliana GN=At1g55490 PE=1 SV=3) HSP 1 Score: 280.796 bits (717), Expect = 6.800e-75 Identity = 145/167 (86.83%), Postives = 151/167 (90.42%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 503 VGAQTETELKEKKLRVEDALNATKAA CTLLRL+SKVDAIK TLDNDEEKVGA+IVKRAL YPLKLIAKNAGVNGSVVSEKVLS+DN K+GYNAATG YEDLMAAGIIDPTKVVRCCLEHA+SVAKTFLMSDCVVVEIKEPEP +P GNPMDNSGYGY Sbjct: 435 VGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKATLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNVKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEP-VPVGNPMDNSGYGY 600
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: RUBB_PEA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 278.485 bits (711), Expect = 3.375e-74 Identity = 146/166 (87.95%), Postives = 149/166 (89.76%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 500 VGAQTETELKEKKLRVEDALNATKAA CTLLRL+SKVDAIK+TL NDEEKVGA+IVKRAL YPLKLIAKNAGVNGSVVSEKVLSSDN KYGYNAATG YEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE A P GNPMDNSGYG Sbjct: 429 VGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKDTLANDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKYGYNAATGKYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPESA-PVGNPMDNSGYG 593
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: RUBB_SECCE (RuBisCO large subunit-binding protein subunit beta, chloroplastic (Fragment) OS=Secale cereale GN=CPN60 PE=2 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 5.957e-71 Identity = 137/167 (82.04%), Postives = 148/167 (88.62%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 503 VGAQTETELKEKKLRVEDALNATKAA CTLLRL++KVDAIK+TL+NDE+KVGA IV+RALCYPLKLIAKNAGVNGSVV+EKVLS+DN K+GYNAATG YEDLMAAGIIDPTKVVRCCLEHA+SVAKTFL SD VVVEIKEPE A P NPMDNSG+GY Sbjct: 334 VGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAAKVDAIKDTLENDEQKVGAEIVRRALCYPLKLIAKNAGVNGSVVTEKVLSNDNFKFGYNAATGQYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVEIKEPE-AAPLANPMDNSGFGY 499
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: RUBB_BRANA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 3.996e-67 Identity = 132/152 (86.84%), Postives = 137/152 (90.13%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEP 458 VGAQTETELKEKKLRVEDALNATKAA CTLLRL+SKVDAIK LDNDEEKVGA+IVKRAL YPLKLIAKNAGVNGSVVSEKVLS+DN K+GYNAATG YEDLMAAGIIDPTKVVRCCLEHA+SVAKTFLMSDCVVVEIKEPEP Sbjct: 435 VGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKAALDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNVKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEP 586
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: RUBC_CHLRE (RuBisCO large subunit-binding protein subunit beta-2 (Fragment) OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 4.742e-52 Identity = 111/160 (69.38%), Postives = 126/160 (78.75%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS-DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI--KEPEPAMPAG 473 VGAQTETELKEKKLRVEDALNATKAA CTLLRLS KVD+IKETL N+E+K+GA+I+KRAL YP+KLIA NAG NGSVV ++V+ + D YGYNAAT +EDLM AGIIDPTKVVRC LE+A SVAKTFL++D VV EI KE PA AG Sbjct: 96 VGAQTETELKEKKLRVEDALNATKAAVEEGIVIGGGCTLLRLSQKVDSIKETLSNEEQKMGADIIKRALSYPIKLIANNAGTNGSVVMQRVMDNIDQPYYGYNAATDTFEDLMEAGIIDPTKVVRCSLENAVSVAKTFLLADVVVTEIPEKEKAPAPAAG 255
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: RUBB_CHLRE (RuBisCO large subunit-binding protein subunit beta-1 (Fragment) OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 2.435e-48 Identity = 103/168 (61.31%), Postives = 127/168 (75.60%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS-DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 503 VGAQTETELKEKKLRVEDALNAT+AA CTLLRLS KVD IK + + E+++GA+I+KRALCYP+KLIA+NAGVNGSVV +V+ + D YGYNAAT ++E+LM GIIDP+KVVRC +E+A SVAKTFL++D VV E+KE E A NP+ G+ Sbjct: 265 VGAQTETELKEKKLRVEDALNATRAAVEEGVVPGGGCTLLRLSEKVDVIKRRMTDPEQQMGADIIKRALCYPIKLIAQNAGVNGSVVMNEVMKNLDRPHYGYNAATDSFENLMETGIIDPSKVVRCSMENAVSVAKTFLLADVVVTELKEIE-AGAKPNPVAPGAAGF 431
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH602_ANAVT (60 kDa chaperonin 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL2 PE=3 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 1.339e-38 Identity = 92/164 (56.10%), Postives = 115/164 (70.12%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 494 VGA TETELK++KLR+EDALNATKAA TL+ L+SKVD IK+ D +EEK+GA+IVKRAL PL+ IA NAGV GSV+ +V SD + GYNAATG +EDL+AAGIIDP KVVR L++A+S+A L ++ +VVE E + A PA M G Sbjct: 379 VGAATETELKDRKLRIEDALNATKAAVAEGIVPGGGKTLIYLASKVDEIKKNFD-EEEKIGADIVKRALEAPLRQIADNAGVEGSVIVSRVKDSDFNT-GYNAATGEFEDLIAAGIIDPAKVVRSALQNAASIAGLVLTTEAIVVEKPEKKAAAPADAGMGGMG 540
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH602_ANASP (60 kDa chaperonin 2 OS=Anabaena sp. (strain PCC 7120) GN=groL2 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.984e-38 Identity = 91/164 (55.49%), Postives = 113/164 (68.90%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 494 VGA TETELK++KLR+EDALNATKAA TL+ L+SKVD IK+ D +EEK+GA+IVKRAL PL+ IA NAG GSV+ +V SD GYNAATG +EDL+AAGIIDP KVVR L++A+S+A L ++ +VVE E + A PA M G Sbjct: 379 VGAATETELKDRKLRIEDALNATKAAVAEGIVPGGGKTLIYLASKVDEIKKNFD-EEEKIGADIVKRALEAPLRQIADNAGAEGSVIVSRVKDSD-FNIGYNAATGEFEDLIAAGIIDPAKVVRSALQNAASIAGLVLTTEAIVVEKPEKKSAAPADAGMGGMG 540
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH602_SYNP6 (60 kDa chaperonin 2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=groL2 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.090e-38 Identity = 87/164 (53.05%), Postives = 110/164 (67.07%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 494 VGA TETELK +KLR+EDALNAT+AA TLL L+S + +++ +L +EK+G IV RAL PL+ IA NAG GSVV EK+ D +GYNA TG YEDL+A+GI+DP KVVR L+ A+SVA L ++ +VV+ EPEPAMPAG M G Sbjct: 380 VGAPTETELKNRKLRIEDALNATRAAIEEGVVPGGGTTLLHLASALTSLQASLTVADEKLGVEIVARALEAPLRQIADNAGAEGSVVVEKLRDKD-FNFGYNALTGQYEDLVASGILDPAKVVRSALQDAASVASLILTTEVLVVDQPEPEPAMPAGGDMGGMG 542
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH601_TRIEI (60 kDa chaperonin 1 OS=Trichodesmium erythraeum (strain IMS101) GN=groL1 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.647e-38 Identity = 86/155 (55.48%), Postives = 110/155 (70.97%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 467 VGA TETELK++KLR+EDALNATKAA TL+ LS+KV+ +K +L+N+EEK+GA+IV+RAL PL IA N+GV GSV+ EKV S+D GYN TG YEDL+AAGI+DP VVR L++A S+A L ++ VVVE E + A P Sbjct: 379 VGAATETELKDRKLRIEDALNATKAAVEEGIVPGGGTTLIHLSTKVEELKGSLNNEEEKIGADIVRRALEAPLNQIANNSGVEGSVIVEKVRSTD-FSVGYNVITGEYEDLIAAGILDPAMVVRSALQNAGSIAGMVLTTEAVVVEKPEKKGAAP 532 The following BLAST results are available for this feature:
BLAST of DY258175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258175 ID=DY258175; Name=DY258175; organism=Citrus clementina; type=EST; length=860bpback to top |